RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 RPL4BP49626 362 aaKnown RBP9.01□□□□□ -0.97
LSR1LSR1 PAN2P53010 1115 aaPredicted RBP9.01□□□□□ -0.97
LSR1LSR1 YGL036WP53185 909 aaPredicted RBP9.01□□□□□ -0.97
LSR1LSR1 HOP2P53187 214 aa9.01□□□□□ -0.97
LSR1LSR1 BIO4P53630 237 aa9.01□□□□□ -0.97
LSR1LSR1 YNL144CP53907 740 aa9.01□□□□□ -0.97
LSR1LSR1 DAK1P54838 584 aaKnown RBP9.01□□□□□ -0.97
LSR1LSR1 UBP2Q01476 1272 aa9.01□□□□□ -0.97
LSR1LSR1 FMN1Q03778 218 aa9.01□□□□□ -0.97
LSR1LSR1 BUD22Q04347 519 aaKnown RBP9.01□□□□□ -0.97
LSR1LSR1 IMA2Q08295 589 aa9.01□□□□□ -0.97
LSR1LSR1 SLP1Q12232 587 aa9.01□□□□□ -0.97
LSR1LSR1 ZPS1Q12512 249 aa9.01□□□□□ -0.97
LSR1LSR1 GAL10P04397 699 aa9□□□□□ -0.97
LSR1LSR1 KEX2P13134 814 aa9□□□□□ -0.97
LSR1LSR1 PUT4P15380 627 aa9□□□□□ -0.97
LSR1LSR1 REC107P21651 314 aa9□□□□□ -0.97
LSR1LSR1 YCR015CP25616 317 aa9□□□□□ -0.97
LSR1LSR1 MEI4P29467 408 aa9□□□□□ -0.97
LSR1LSR1 YME2P32843 850 aa9□□□□□ -0.97
LSR1LSR1 PNT1P38969 423 aa9□□□□□ -0.97
LSR1LSR1 PRK1P40494 810 aa9□□□□□ -0.97
LSR1LSR1 ASG7P46993 209 aa9□□□□□ -0.97
LSR1LSR1 ERP6P53198 216 aa9□□□□□ -0.97
LSR1LSR1 TEP1P53916 434 aa9□□□□□ -0.97
LSR1LSR1 CDC55Q00362 526 aa9□□□□□ -0.97
LSR1LSR1 GTB1Q04924 702 aa9□□□□□ -0.97
LSR1LSR1 YET3Q07451 203 aa9□□□□□ -0.97
LSR1LSR1 SGT2Q12118 346 aaKnown RBP9□□□□□ -0.97
LSR1LSR1 NOT5Q12514 560 aaPredicted RBP9□□□□□ -0.97
LSR1LSR1 SEC1P30619 724 aaKnown RBP8.99□□□□□ -0.97
LSR1LSR1 SSE1P32589 693 aaKnown RBP8.99□□□□□ -0.97
LSR1LSR1 YMC2P38087 329 aa8.99□□□□□ -0.97
LSR1LSR1 STN1P38960 494 aa8.99□□□□□ -0.97
LSR1LSR1 TAH11P47112 604 aa8.99□□□□□ -0.97
LSR1LSR1 YLL058WQ12198 575 aa8.99□□□□□ -0.97
LSR1LSR1 PCD1Q12524 340 aa8.99□□□□□ -0.97
LSR1LSR1 YDR461C-AQ2V2P7 80 aa8.99□□□□□ -0.97
LSR1LSR1 COX4P04037 155 aa8.98□□□□□ -0.97
LSR1LSR1 PKC1P24583 1151 aa8.98□□□□□ -0.97
LSR1LSR1 SPS22P25380 463 aa8.98□□□□□ -0.97
LSR1LSR1 AAD3P25612 363 aa8.98□□□□□ -0.97
LSR1LSR1 TOA1P32773 286 aa8.98□□□□□ -0.97
LSR1LSR1 YBL036CP38197 257 aa8.98□□□□□ -0.97
LSR1LSR1 GUA1P38625 525 aaKnown RBP8.98□□□□□ -0.97
LSR1LSR1 ERP2P39704 215 aa8.98□□□□□ -0.97
LSR1LSR1 SCC4P40090 624 aa8.98□□□□□ -0.97
LSR1LSR1 PEA2P40091 420 aa8.98□□□□□ -0.97
LSR1LSR1 ULI1P43604 169 aa8.98□□□□□ -0.97
LSR1LSR1 SUM1P46676 1062 aa8.98□□□□□ -0.97
LSR1LSR1 NET1P47035 1189 aa8.98□□□□□ -0.97
LSR1LSR1 ACF4P47129 309 aa8.98□□□□□ -0.97
LSR1LSR1 SCS3P53012 380 aa8.98□□□□□ -0.97
LSR1LSR1 MND1P53102 219 aa8.98□□□□□ -0.97
LSR1LSR1 USE1P53146 245 aa8.98□□□□□ -0.97
LSR1LSR1 YAF9P53930 226 aa8.98□□□□□ -0.97
LSR1LSR1 OSH6Q02201 448 aa8.98□□□□□ -0.97
LSR1LSR1 LGE1Q02796 332 aaKnown RBP8.98□□□□□ -0.97
LSR1LSR1 ADI1Q03677 179 aa8.98□□□□□ -0.97
LSR1LSR1 AIM39Q08223 395 aa8.98□□□□□ -0.97
LSR1LSR1 EMP46Q12396 444 aa8.98□□□□□ -0.97
LSR1LSR1 SPE4Q12455 300 aa8.98□□□□□ -0.97
LSR1LSR1 TRM11Q12463 433 aa8.98□□□□□ -0.97
LSR1LSR1 EXO70P19658 623 aa8.97□□□□□ -0.97
LSR1LSR1 YUR1P26725 428 aa8.97□□□□□ -0.97
LSR1LSR1 YSC84P32793 468 aa8.97□□□□□ -0.97
LSR1LSR1 YIL054WP40524 105 aa8.97□□□□□ -0.97
LSR1LSR1 PSP2P50109 593 aaKnown RBP8.97□□□□□ -0.97
LSR1LSR1 TPO2P53283 614 aa8.97□□□□□ -0.97
LSR1LSR1 NMA111P53920 997 aa8.97□□□□□ -0.97
LSR1LSR1 ATP25Q03153 612 aa8.97□□□□□ -0.97
LSR1LSR1 HFD1Q04458 532 aa8.97□□□□□ -0.97
LSR1LSR1 CFT2Q12102 859 aaPredicted RBP8.97□□□□□ -0.97
LSR1LSR1 YRR1Q12172 810 aa8.97□□□□□ -0.97
LSR1LSR1 MST1P07236 462 aa8.96□□□□□ -0.98
LSR1LSR1 RPC19P28000 142 aaKnown RBP8.96□□□□□ -0.98
LSR1LSR1 SIN4P32259 974 aa8.96□□□□□ -0.98
LSR1LSR1 DEF1P35732 738 aaKnown RBP8.96□□□□□ -0.98
LSR1LSR1 APN2P38207 520 aa8.96□□□□□ -0.98
LSR1LSR1 ALG5P40350 334 aa8.96□□□□□ -0.98
LSR1LSR1 SAD1P43589 448 aa8.96□□□□□ -0.98
LSR1LSR1 NUT1P53114 1132 aa8.96□□□□□ -0.98
LSR1LSR1 YNL247WP53852 767 aaKnown RBP8.96□□□□□ -0.98
LSR1LSR1 NOP15P53927 220 aaPredicted RBP8.96□□□□□ -0.98
LSR1LSR1 YNL108CP53929 270 aa8.96□□□□□ -0.98
LSR1LSR1 ELP3Q02908 557 aaKnown RBP8.96□□□□□ -0.98
LSR1LSR1 ARO80Q04052 950 aa8.96□□□□□ -0.98
LSR1LSR1 DIS3Q08162 1001 aaKnown RBP8.96□□□□□ -0.98
LSR1LSR1 CUE5Q08412 411 aaKnown RBP8.96□□□□□ -0.98
LSR1LSR1 OCA6Q12454 224 aa8.96□□□□□ -0.98
LSR1LSR1 TAL1P15019 335 aaKnown RBP8.95□□□□□ -0.98
LSR1LSR1 SAT4P25333 603 aaKnown RBP8.95□□□□□ -0.98
LSR1LSR1 NPP1P25353 742 aa8.95□□□□□ -0.98
LSR1LSR1 RPL5P26321 297 aaKnown RBP8.95□□□□□ -0.98
LSR1LSR1 HXT3P32466 567 aaKnown RBP8.95□□□□□ -0.98
LSR1LSR1 SIP2P34164 415 aaKnown RBP8.95□□□□□ -0.98
LSR1LSR1 ABZ1P37254 787 aaPredicted RBP8.95□□□□□ -0.98
LSR1LSR1 GVP36P40531 326 aaKnown RBP8.95□□□□□ -0.98
LSR1LSR1 JJJ3P47138 172 aa8.95□□□□□ -0.98
LSR1LSR1 RTA1P53047 317 aa8.95□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms