RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 NKX2-3Q8TAU0 364 aa9.54□□□□□ -0.88
COL21A1-212ENST00000535941 JAKMIP1Q96N16 626 aaKnown RBP9.54□□□□□ -0.88
COL21A1-212ENST00000535941 LEMD3Q9Y2U8 911 aa9.54□□□□□ -0.88
COL21A1-212ENST00000535941 E7EWF7 191 aa9.53□□□□□ -0.88
COL21A1-212ENST00000535941 GPAA1O43292 621 aa9.53□□□□□ -0.88
COL21A1-212ENST00000535941 HMGB1P09429 215 aaKnown RBP9.53□□□□□ -0.88
COL21A1-212ENST00000535941 TMC4Q7Z404 712 aa9.53□□□□□ -0.88
COL21A1-212ENST00000535941 SLC51AQ86UW1 340 aa9.53□□□□□ -0.88
COL21A1-212ENST00000535941 UPF3BQ9BZI7 483 aaKnown RBP9.53□□□□□ -0.88
COL21A1-212ENST00000535941 PDRG1Q9NUG6 133 aa9.53□□□□□ -0.88
COL21A1-212ENST00000535941 MKRN1Q9UHC7 482 aaKnown RBP9.53□□□□□ -0.88
COL21A1-212ENST00000535941 CYP46A1Q9Y6A2 500 aa9.53□□□□□ -0.88
COL21A1-212ENST00000535941 SERPINB2P05120 415 aa9.53□□□□□ -0.88
COL21A1-212ENST00000535941 ANTXR2P58335 489 aa9.53□□□□□ -0.88
COL21A1-212ENST00000535941 NUCB2P80303 420 aa9.53□□□□□ -0.88
COL21A1-212ENST00000535941 CNBD1Q8NA66 436 aa9.53□□□□□ -0.88
COL21A1-212ENST00000535941 TDRD7Q8NHU6 1098 aaKnown RBP9.53□□□□□ -0.88
COL21A1-212ENST00000535941 MTA3Q9BTC8 594 aa9.53□□□□□ -0.88
COL21A1-212ENST00000535941 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.53□□□□□ -0.88
COL21A1-212ENST00000535941 PAPPA2Q9BXP8 1791 aa9.52□□□□□ -0.88
COL21A1-212ENST00000535941 HELBQ8NG08 1087 aaPredicted RBP9.52□□□□□ -0.88
COL21A1-212ENST00000535941 FGAP02671 866 aa9.52□□□□□ -0.89
COL21A1-212ENST00000535941 CPA1P15085 419 aa9.52□□□□□ -0.89
COL21A1-212ENST00000535941 ZKSCAN1P17029 563 aaPredicted RBP9.52□□□□□ -0.89
COL21A1-212ENST00000535941 ANKRD1Q15327 319 aa9.52□□□□□ -0.89
COL21A1-212ENST00000535941 NEK1Q96PY6 1258 aa9.52□□□□□ -0.89
COL21A1-212ENST00000535941 DENND2AQ9ULE3 1009 aa9.52□□□□□ -0.89
COL21A1-212ENST00000535941 XDHP47989 1333 aa9.52□□□□□ -0.89
COL21A1-212ENST00000535941 GSG1L2A8MUP6 293 aa9.52□□□□□ -0.89
COL21A1-212ENST00000535941 GTF3C6Q969F1 213 aa9.52□□□□□ -0.89
COL21A1-212ENST00000535941 COL4A5P29400 1685 aa9.52□□□□□ -0.89
COL21A1-212ENST00000535941 PFKFB2O60825 505 aa9.51□□□□□ -0.89
COL21A1-212ENST00000535941 GIMAP6Q6P9H5 292 aa9.51□□□□□ -0.89
COL21A1-212ENST00000535941 PLCD3Q8N3E9 789 aa9.51□□□□□ -0.89
COL21A1-212ENST00000535941 PATL2C9JE40 543 aaKnown RBP9.51□□□□□ -0.89
COL21A1-212ENST00000535941 FKBP4Q02790 459 aaKnown RBP eCLIP9.51□□□□□ -0.89
COL21A1-212ENST00000535941 DHX32Q7L7V1 743 aaKnown RBP9.51□□□□□ -0.89
COL21A1-212ENST00000535941 NSUN4Q96CB9 384 aaKnown RBP9.51□□□□□ -0.89
COL21A1-212ENST00000535941 BRIP1Q9BX63 1249 aa9.51□□□□□ -0.89
COL21A1-212ENST00000535941 FAM205AQ6ZU69 1335 aa9.51□□□□□ -0.89
COL21A1-212ENST00000535941 BAG4O95429 457 aaKnown RBP9.5□□□□□ -0.89
COL21A1-212ENST00000535941 SRGNP10124 158 aa9.5□□□□□ -0.89
COL21A1-212ENST00000535941 TXNRD3Q86VQ6 643 aa9.5□□□□□ -0.89
COL21A1-212ENST00000535941 TBC1D10CQ8IV04 446 aa9.5□□□□□ -0.89
COL21A1-212ENST00000535941 STAG1Q8WVM7 1258 aa9.5□□□□□ -0.89
COL21A1-212ENST00000535941 CTDNEP1O95476 244 aa9.5□□□□□ -0.89
COL21A1-212ENST00000535941 GNAT2P19087 354 aa9.5□□□□□ -0.89
COL21A1-212ENST00000535941 CLCN1P35523 988 aa9.5□□□□□ -0.89
COL21A1-212ENST00000535941 SLC9C2Q5TAH2 1124 aa9.5□□□□□ -0.89
COL21A1-212ENST00000535941 ZNF274Q96GC6 653 aaPredicted RBP9.5□□□□□ -0.89
COL21A1-212ENST00000535941 LLPHQ9BRT6 129 aaKnown RBP9.5□□□□□ -0.89
COL21A1-212ENST00000535941 RTFDC1Q9BY42 306 aaPredicted RBP9.5□□□□□ -0.89
COL21A1-212ENST00000535941 BBOX1O75936 387 aa9.5□□□□□ -0.89
COL21A1-212ENST00000535941 GYG1P46976 350 aa9.5□□□□□ -0.89
COL21A1-212ENST00000535941 GPSM2P81274 684 aa9.5□□□□□ -0.89
COL21A1-212ENST00000535941 BLOC1S2Q6QNY1 142 aa9.5□□□□□ -0.89
COL21A1-212ENST00000535941 SP8Q8IXZ3 490 aa9.5□□□□□ -0.89
COL21A1-212ENST00000535941 CTNNA3Q9UI47 895 aa9.5□□□□□ -0.89
COL21A1-212ENST00000535941 HPS5Q9UPZ3 1129 aa9.5□□□□□ -0.89
COL21A1-212ENST00000535941 A0A0G2JS52 829 aa9.49□□□□□ -0.89
COL21A1-212ENST00000535941 PHF14O94880 888 aa9.49□□□□□ -0.89
COL21A1-212ENST00000535941 ST5P78524 1137 aa9.49□□□□□ -0.89
COL21A1-212ENST00000535941 TTLL5Q6EMB2 1281 aa9.49□□□□□ -0.89
COL21A1-212ENST00000535941 NLGN1Q8N2Q7 840 aa9.49□□□□□ -0.89
COL21A1-212ENST00000535941 COL2A1P02458 1487 aaPredicted RBP9.49□□□□□ -0.89
COL21A1-212ENST00000535941 DDX11L8A8MPP1 907 aa9.49□□□□□ -0.89
COL21A1-212ENST00000535941 LCORLQ8N3X6 602 aa9.49□□□□□ -0.89
COL21A1-212ENST00000535941 C7orf43Q8WVR3 580 aa9.49□□□□□ -0.89
COL21A1-212ENST00000535941 RBM17Q96I25 401 aaKnown RBP9.49□□□□□ -0.89
COL21A1-212ENST00000535941 LMBRD1Q9NUN5 540 aa9.49□□□□□ -0.89
COL21A1-212ENST00000535941 MYH4Q9Y623 1939 aa9.49□□□□□ -0.89
COL21A1-212ENST00000535941 FAM177BA6PVY3 158 aa9.49□□□□□ -0.89
COL21A1-212ENST00000535941 PTMSP20962 102 aa9.49□□□□□ -0.89
COL21A1-212ENST00000535941 NT5C2P49902 561 aa9.49□□□□□ -0.89
COL21A1-212ENST00000535941 BICDL1Q6ZP65 573 aa9.49□□□□□ -0.89
COL21A1-212ENST00000535941 ILDR1Q86SU0 546 aaPredicted RBP9.49□□□□□ -0.89
COL21A1-212ENST00000535941 SGMS1Q86VZ5 419 aa9.49□□□□□ -0.89
COL21A1-212ENST00000535941 FAM163AQ96GL9 167 aaPredicted RBP9.49□□□□□ -0.89
COL21A1-212ENST00000535941 ATAD5Q96QE3 1844 aa9.49□□□□□ -0.89
COL21A1-212ENST00000535941 GAKO14976 1311 aa9.48□□□□□ -0.89
COL21A1-212ENST00000535941 RCAN1P53805 252 aa9.48□□□□□ -0.89
COL21A1-212ENST00000535941 MAP3K12Q12852 859 aa9.48□□□□□ -0.89
COL21A1-212ENST00000535941 MAGEB6Q8N7X4 407 aa9.48□□□□□ -0.89
COL21A1-212ENST00000535941 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.48□□□□□ -0.89
COL21A1-212ENST00000535941 ATP6V0A2Q9Y487 856 aa9.48□□□□□ -0.89
COL21A1-212ENST00000535941 NEDD4P46934 1319 aa9.48□□□□□ -0.89
COL21A1-212ENST00000535941 FSD2A1L4K1 749 aa9.48□□□□□ -0.89
COL21A1-212ENST00000535941 ATP2B4P23634 1241 aa9.48□□□□□ -0.89
COL21A1-212ENST00000535941 Q6ZUG5 572 aa9.48□□□□□ -0.89
COL21A1-212ENST00000535941 IFNL3Q8IZI9 196 aa9.48□□□□□ -0.89
COL21A1-212ENST00000535941 MTMR6Q9Y217 621 aa9.48□□□□□ -0.89
COL21A1-212ENST00000535941 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.48□□□□□ -0.89
COL21A1-212ENST00000535941 APBA3O96018 575 aa9.47□□□□□ -0.89
COL21A1-212ENST00000535941 PPP4CP60510 307 aa9.47□□□□□ -0.89
COL21A1-212ENST00000535941 SCRN1Q12765 414 aa9.47□□□□□ -0.89
COL21A1-212ENST00000535941 SBK1Q52WX2 424 aa9.47□□□□□ -0.89
COL21A1-212ENST00000535941 GORABQ5T7V8 394 aa9.47□□□□□ -0.89
COL21A1-212ENST00000535941 STYK1Q6J9G0 422 aa9.47□□□□□ -0.89
COL21A1-212ENST00000535941 IGDCC4Q8TDY8 1250 aa9.47□□□□□ -0.89
COL21A1-212ENST00000535941 ARID3AQ99856 593 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms