RNA–Protein interactions for RNA: ENSMUST00000109113.7

Clk4-203, Transcript of Dual specificity protein kinase CLK4, mousemouse

TSL 1 (best) BASIC

Gene Clk4, Length 1,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4-203ENSMUST00000109113 Rgl3Q3UYI5 709 aa6.63□□□□□ -1.35
Clk4-203ENSMUST00000109113 Nacc1Q7TSZ8 514 aa6.63□□□□□ -1.35
Clk4-203ENSMUST00000109113 OptnQ8K3K8 584 aa6.63□□□□□ -1.35
Clk4-203ENSMUST00000109113 Chst7Q9EP78 484 aa6.63□□□□□ -1.35
Clk4-203ENSMUST00000109113 Dnajb8Q9QYI7 227 aa6.63□□□□□ -1.35
Clk4-203ENSMUST00000109113 Rps6ka4Q9Z2B9 773 aa6.63□□□□□ -1.35
Clk4-203ENSMUST00000109113 Trpm3Q5F4S9 1721 aa6.63□□□□□ -1.35
Clk4-203ENSMUST00000109113 Cdk12Q14AX6 1484 aaKnown RBP6.63□□□□□ -1.35
Clk4-203ENSMUST00000109113 Adrb2P18762 418 aa6.62□□□□□ -1.35
Clk4-203ENSMUST00000109113 Nxpe4Q52KP5 543 aa6.62□□□□□ -1.35
Clk4-203ENSMUST00000109113 Htatsf1Q8BGC0 757 aa6.62□□□□□ -1.35
Clk4-203ENSMUST00000109113 Dennd6aQ8BH65 605 aa6.62□□□□□ -1.35
Clk4-203ENSMUST00000109113 Camkk2Q8C078 588 aa6.62□□□□□ -1.35
Clk4-203ENSMUST00000109113 Atg14Q8CDJ3 492 aa6.62□□□□□ -1.35
Clk4-203ENSMUST00000109113 Fbxo33Q8VE08 562 aa6.62□□□□□ -1.35
Clk4-203ENSMUST00000109113 Pear1Q8VIK5 1034 aa6.62□□□□□ -1.35
Clk4-203ENSMUST00000109113 BccipQ9CWI3 316 aa6.62□□□□□ -1.35
Clk4-203ENSMUST00000109113 Tmf1B9EKI3 1091 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 Fam181aJ3QNB7 292 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 Tbc1d9Q3UYK3 1264 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 Ldlrad2Q3V0V0 142 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 Ube2oQ6ZPJ3 1288 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 Col23a1Q8K4G2 532 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 V1ra11Q8R2E6 318 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 Nlgn1Q99K10 843 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 Cyp2c69E9PXC3 491 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 AampJ3QN89 436 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 Cyp2c40P56657 491 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 Rundc1Q0VDN7 615 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 Msl1Q6PDM1 616 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 Phf20l1Q8CCJ9 1013 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 FktnQ8R507 461 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 Acot7Q91V12 381 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 DmtnQ9WV69 405 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 Kif16bB1AVY7 1312 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 Mapk8ip3Q9ESN9 1337 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 Usp19Q3UJD6 1360 aa6.61□□□□□ -1.35
Clk4-203ENSMUST00000109113 Chd4Q6PDQ2 1915 aaKnown RBP6.6□□□□□ -1.35
Clk4-203ENSMUST00000109113 C4bP01029 1738 aa6.6□□□□□ -1.35
Clk4-203ENSMUST00000109113 Spata31d1bE9QA57 1361 aa6.6□□□□□ -1.35
Clk4-203ENSMUST00000109113 Gm45618A0A1B0GSA0 219 aa6.6□□□□□ -1.35
Clk4-203ENSMUST00000109113 Akap2O54931 893 aa6.6□□□□□ -1.35
Clk4-203ENSMUST00000109113 Tgfb2P27090 414 aa6.6□□□□□ -1.35
Clk4-203ENSMUST00000109113 NogP97466 232 aa6.6□□□□□ -1.35
Clk4-203ENSMUST00000109113 Dusp13Q9QYJ7 198 aa6.6□□□□□ -1.35
Clk4-203ENSMUST00000109113 Col11a2Q64739 1736 aa6.59□□□□□ -1.35
Clk4-203ENSMUST00000109113 ScaperF8VQ70 1398 aaKnown RBP6.59□□□□□ -1.35
Clk4-203ENSMUST00000109113 Tlr7P58681 1050 aa6.59□□□□□ -1.35
Clk4-203ENSMUST00000109113 Mex3cQ05A36 652 aaKnown RBP6.59□□□□□ -1.35
Clk4-203ENSMUST00000109113 Gja3Q64448 417 aa6.59□□□□□ -1.35
Clk4-203ENSMUST00000109113 Smc5Q8CG46 1101 aaKnown RBP6.59□□□□□ -1.35
Clk4-203ENSMUST00000109113 Rpgrip1lQ8CG73 1264 aa6.59□□□□□ -1.35
Clk4-203ENSMUST00000109113 Stard8Q8K031 1019 aa6.59□□□□□ -1.35
Clk4-203ENSMUST00000109113 Cc2d1aQ8K1A6 943 aa6.59□□□□□ -1.35
Clk4-203ENSMUST00000109113 Dnttip2Q8R2M2 758 aaKnown RBP6.59□□□□□ -1.35
Clk4-203ENSMUST00000109113 Exosc9Q9JHI7 438 aaKnown RBP6.59□□□□□ -1.35
Clk4-203ENSMUST00000109113 Ubr3Q5U430 1889 aa6.59□□□□□ -1.35
Clk4-203ENSMUST00000109113 Col24a1Q30D77 1733 aa6.59□□□□□ -1.35
Clk4-203ENSMUST00000109113 MaptP10637 733 aa6.58□□□□□ -1.36
Clk4-203ENSMUST00000109113 Klf16P58334 251 aa6.58□□□□□ -1.36
Clk4-203ENSMUST00000109113 Grb7Q03160 535 aa6.58□□□□□ -1.36
Clk4-203ENSMUST00000109113 SobpQ0P5V2 864 aa6.58□□□□□ -1.36
Clk4-203ENSMUST00000109113 Zranb3Q6NZP1 1069 aa6.58□□□□□ -1.36
Clk4-203ENSMUST00000109113 Ppp1r9bQ6R891 817 aaKnown RBP6.58□□□□□ -1.36
Clk4-203ENSMUST00000109113 Ipo8Q7TMY7 1010 aa6.58□□□□□ -1.36
Clk4-203ENSMUST00000109113 Klc3Q91W40 508 aa6.58□□□□□ -1.36
Clk4-203ENSMUST00000109113 Chmp5Q9D7S9 219 aa6.58□□□□□ -1.36
Clk4-203ENSMUST00000109113 CemipQ8BI06 1361 aa6.58□□□□□ -1.36
Clk4-203ENSMUST00000109113 Pcbp4P57724 403 aaKnown RBP6.58□□□□□ -1.36
Clk4-203ENSMUST00000109113 Ccdc102aQ3TMW1 549 aa6.58□□□□□ -1.36
Clk4-203ENSMUST00000109113 SpdyaQ5IBH7 310 aa6.58□□□□□ -1.36
Clk4-203ENSMUST00000109113 Scaf1Q5U4C3 1256 aaKnown RBP6.58□□□□□ -1.36
Clk4-203ENSMUST00000109113 Lrp12Q8BUJ9 858 aa6.58□□□□□ -1.36
Clk4-203ENSMUST00000109113 Gtf3c5Q8R2T8 520 aa6.58□□□□□ -1.36
Clk4-203ENSMUST00000109113 Prr13Q9CQJ5 137 aa6.58□□□□□ -1.36
Clk4-203ENSMUST00000109113 Gtf2e1Q9D0D5 440 aa6.58□□□□□ -1.36
Clk4-203ENSMUST00000109113 Taf1dQ9D4V4 322 aa6.58□□□□□ -1.36
Clk4-203ENSMUST00000109113 InsrP15208 1372 aa6.57□□□□□ -1.36
Clk4-203ENSMUST00000109113 CoblQ5NBX1 1337 aaKnown RBP6.57□□□□□ -1.36
Clk4-203ENSMUST00000109113 Cyp2c68K7N6C2 491 aa6.57□□□□□ -1.36
Clk4-203ENSMUST00000109113 Ptcd1Q8C2E4 695 aaKnown RBP6.57□□□□□ -1.36
Clk4-203ENSMUST00000109113 TkfcQ8VC30 578 aa6.57□□□□□ -1.36
Clk4-203ENSMUST00000109113 Rwdd1Q9CQK7 243 aa6.57□□□□□ -1.36
Clk4-203ENSMUST00000109113 Pde3aQ9Z0X4 1141 aa6.57□□□□□ -1.36
Clk4-203ENSMUST00000109113 Plekhh1Q80TI1 1356 aa6.56□□□□□ -1.36
Clk4-203ENSMUST00000109113 Togaram1Q6A070 1776 aaKnown RBP6.56□□□□□ -1.36
Clk4-203ENSMUST00000109113 CtgfP29268 348 aa6.56□□□□□ -1.36
Clk4-203ENSMUST00000109113 Foxk2Q3UCQ1 651 aa6.56□□□□□ -1.36
Clk4-203ENSMUST00000109113 Ppp1r1bQ60829 194 aa6.56□□□□□ -1.36
Clk4-203ENSMUST00000109113 Sorbs1Q62417 1290 aa6.56□□□□□ -1.36
Clk4-203ENSMUST00000109113 B4galnt3Q6L8S8 986 aa6.56□□□□□ -1.36
Clk4-203ENSMUST00000109113 Usp20Q8C6M1 916 aa6.56□□□□□ -1.36
Clk4-203ENSMUST00000109113 Upk3bl1Q9D701 249 aa6.56□□□□□ -1.36
Clk4-203ENSMUST00000109113 Gm21680A0A0G2JGR8 267 aa6.55□□□□□ -1.36
Clk4-203ENSMUST00000109113 Thsd7bQ6P4U0 1607 aa6.55□□□□□ -1.36
Clk4-203ENSMUST00000109113 Col15a1O35206 1367 aa6.55□□□□□ -1.36
Clk4-203ENSMUST00000109113 StrcQ8VIM6 1809 aa6.54□□□□□ -1.36
Clk4-203ENSMUST00000109113 Atf6F6VAN0 656 aa6.54□□□□□ -1.36
Clk4-203ENSMUST00000109113 Hsp90ab1P11499 724 aaKnown RBP6.54□□□□□ -1.36
Clk4-203ENSMUST00000109113 HgsnatQ3UDW8 656 aa6.54□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms