RNA–Protein interactions for RNA: ENSMUST00000109113.7

Clk4-203, Transcript of Dual specificity protein kinase CLK4, mousemouse

TSL 1 (best) BASIC

Gene Clk4, Length 1,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4-203ENSMUST00000109113 Mapk8ip2Q9ERE9 830 aa25■■□□□ 1.59
Clk4-203ENSMUST00000109113 Chic1Q8CBW7 227 aa23.3■■□□□ 1.32
Clk4-203ENSMUST00000109113 Phf23Q8BSN5 401 aa20.75■□□□□ 0.91
Clk4-203ENSMUST00000109113 Gab3Q8BSM5 595 aa19.37■□□□□ 0.69
Clk4-203ENSMUST00000109113 Fam163aQ8CAA5 168 aa19.36■□□□□ 0.69
Clk4-203ENSMUST00000109113 Plppr3Q7TPB0 716 aa18.82■□□□□ 0.6
Clk4-203ENSMUST00000109113 GapdhsQ64467 440 aa18.75■□□□□ 0.59
Clk4-203ENSMUST00000109113 Senp3Q9EP97 568 aaKnown RBP18.46■□□□□ 0.55
Clk4-203ENSMUST00000109113 ArsiQ32KI9 573 aa17.36■□□□□ 0.37
Clk4-203ENSMUST00000109113 Slc34a2Q9DBP0 697 aa17.08■□□□□ 0.32
Clk4-203ENSMUST00000109113 Hoxd11P23813 323 aa16.77■□□□□ 0.27
Clk4-203ENSMUST00000109113 Znf219Q6IQX8 726 aa16.48■□□□□ 0.23
Clk4-203ENSMUST00000109113 Trap1aP19473 224 aa16.21■□□□□ 0.19
Clk4-203ENSMUST00000109113 Kcna4Q61423 654 aa16.2■□□□□ 0.18
Clk4-203ENSMUST00000109113 Dnajc5bQ9CQ94 199 aa15.96■□□□□ 0.15
Clk4-203ENSMUST00000109113 Akt1s1Q9D1F4 257 aa15.71■□□□□ 0.11
Clk4-203ENSMUST00000109113 Chrna2Q91X60 512 aa15.57■□□□□ 0.08
Clk4-203ENSMUST00000109113 Rsph4aQ8BYM7 716 aa15.54■□□□□ 0.08
Clk4-203ENSMUST00000109113 Znf704Q9ERQ3 566 aa15.49■□□□□ 0.07
Clk4-203ENSMUST00000109113 Slc4a5E9Q3M5 1116 aa15.48■□□□□ 0.07
Clk4-203ENSMUST00000109113 Rimbp2Q80U40 1072 aa15.43■□□□□ 0.06
Clk4-203ENSMUST00000109113 Cacnb1Q8R3Z5 597 aa15.43■□□□□ 0.06
Clk4-203ENSMUST00000109113 Znf703P0CL69 594 aa14.72□□□□□ -0.05
Clk4-203ENSMUST00000109113 Ildr2B5TVM2 661 aa14.7□□□□□ -0.06
Clk4-203ENSMUST00000109113 Dmrt2Q8BG36 561 aa14.37□□□□□ -0.11
Clk4-203ENSMUST00000109113 Atf5O70191 283 aa14.23□□□□□ -0.13
Clk4-203ENSMUST00000109113 Sox12Q04890 314 aa14.15□□□□□ -0.14
Clk4-203ENSMUST00000109113 Prr29B1ARI9 187 aa14.13□□□□□ -0.15
Clk4-203ENSMUST00000109113 Bach1P97302 739 aa14.08□□□□□ -0.16
Clk4-203ENSMUST00000109113 Kcnn1Q9EQR3 537 aa14.02□□□□□ -0.16
Clk4-203ENSMUST00000109113 Hs6st3Q9QYK4 470 aa14.01□□□□□ -0.17
Clk4-203ENSMUST00000109113 Ppp4r2Q0VGB7 417 aa13.93□□□□□ -0.18
Clk4-203ENSMUST00000109113 Grwd1Q810D6 446 aaKnown RBP13.8□□□□□ -0.2
Clk4-203ENSMUST00000109113 Egfem1Q8C088 590 aa13.8□□□□□ -0.2
Clk4-203ENSMUST00000109113 Zbtb7aO88939 569 aaKnown RBP13.7□□□□□ -0.22
Clk4-203ENSMUST00000109113 Evx2P49749 475 aa13.62□□□□□ -0.23
Clk4-203ENSMUST00000109113 Pip4p2Q9CZX7 257 aa13.53□□□□□ -0.24
Clk4-203ENSMUST00000109113 Abcb7Q61102 752 aaKnown RBP13.46□□□□□ -0.25
Clk4-203ENSMUST00000109113 WdpcpQ8C456 722 aa13.44□□□□□ -0.26
Clk4-203ENSMUST00000109113 Ppargc1bQ8VHJ7 1014 aa13.41□□□□□ -0.26
Clk4-203ENSMUST00000109113 Ifnlr1Q8CGK5 535 aa13.32□□□□□ -0.28
Clk4-203ENSMUST00000109113 Clcn6O35454 870 aa13.29□□□□□ -0.28
Clk4-203ENSMUST00000109113 Krtap4-1Q3UUY3 169 aa13.25□□□□□ -0.29
Clk4-203ENSMUST00000109113 Rnf216P58283 853 aa13.23□□□□□ -0.29
Clk4-203ENSMUST00000109113 G430095P16RikE9Q913 147 aa13.21□□□□□ -0.29
Clk4-203ENSMUST00000109113 Kank3Q9Z1P7 791 aa13.21□□□□□ -0.29
Clk4-203ENSMUST00000109113 Nkx1-1G3UXB3 402 aa13.12□□□□□ -0.31
Clk4-203ENSMUST00000109113 Foxp4Q9DBY0 795 aaKnown RBP13.09□□□□□ -0.31
Clk4-203ENSMUST00000109113 Slc4a1apE9PX68 744 aa13.06□□□□□ -0.32
Clk4-203ENSMUST00000109113 1700123L14RikQ3V2K7 440 aa13.03□□□□□ -0.32
Clk4-203ENSMUST00000109113 ArntlQ9WTL8 632 aa13.02□□□□□ -0.32
Clk4-203ENSMUST00000109113 Gtpbp6Q3U6U5 514 aa12.95□□□□□ -0.34
Clk4-203ENSMUST00000109113 Zbtb12Q9Z150 459 aa12.93□□□□□ -0.34
Clk4-203ENSMUST00000109113 Lhx8O35652 367 aa12.87□□□□□ -0.35
Clk4-203ENSMUST00000109113 Cdca7Q9D0M2 382 aa12.85□□□□□ -0.35
Clk4-203ENSMUST00000109113 Pitpnm1O35954 1243 aa12.78□□□□□ -0.36
Clk4-203ENSMUST00000109113 Trim35Q8C006 501 aa12.7□□□□□ -0.38
Clk4-203ENSMUST00000109113 C1qtnf12Q8R2Z0 308 aa12.55□□□□□ -0.4
Clk4-203ENSMUST00000109113 Fxr2Q9WVR4 673 aaKnown RBP12.55□□□□□ -0.4
Clk4-203ENSMUST00000109113 Ms4a5Q810P8 197 aa12.44□□□□□ -0.42
Clk4-203ENSMUST00000109113 Gm11555B1AQ89 175 aa12.4□□□□□ -0.42
Clk4-203ENSMUST00000109113 Gm11563B1AQ90 168 aa12.26□□□□□ -0.45
Clk4-203ENSMUST00000109113 Krtap4-7Q9D732 168 aa12.26□□□□□ -0.45
Clk4-203ENSMUST00000109113 Kiaa1522A2A7S8 1013 aa12.21□□□□□ -0.46
Clk4-203ENSMUST00000109113 Ehmt2Q9Z148 1263 aaKnown RBP12.15□□□□□ -0.47
Clk4-203ENSMUST00000109113 Rnf225Q9D7D1 332 aa12.11□□□□□ -0.47
Clk4-203ENSMUST00000109113 Fbln2P37889 1221 aa12.05□□□□□ -0.48
Clk4-203ENSMUST00000109113 Dok7Q18PE0 504 aa12.05□□□□□ -0.48
Clk4-203ENSMUST00000109113 Trim41Q5NCC3 630 aa11.97□□□□□ -0.49
Clk4-203ENSMUST00000109113 Dcbld2Q91ZV3 769 aa11.97□□□□□ -0.49
Clk4-203ENSMUST00000109113 Cadps2Q8BYR5 1297 aa11.9□□□□□ -0.5
Clk4-203ENSMUST00000109113 Nyap1Q6PFX7 833 aa11.89□□□□□ -0.51
Clk4-203ENSMUST00000109113 Npm3Q9CPP0 175 aaKnown RBP11.86□□□□□ -0.51
Clk4-203ENSMUST00000109113 Gjc2Q8BQU6 440 aa11.84□□□□□ -0.51
Clk4-203ENSMUST00000109113 Pelp1Q9DBD5 1123 aaKnown RBP11.82□□□□□ -0.52
Clk4-203ENSMUST00000109113 Pcdh10E9PXQ7 1057 aa11.82□□□□□ -0.52
Clk4-203ENSMUST00000109113 Riok3Q9DBU3 519 aaKnown RBP11.8□□□□□ -0.52
Clk4-203ENSMUST00000109113 SnphQ80U23 495 aa11.79□□□□□ -0.52
Clk4-203ENSMUST00000109113 Map3k10Q66L42 940 aa11.78□□□□□ -0.52
Clk4-203ENSMUST00000109113 A0A1Y7VJH8 109 aa11.7□□□□□ -0.54
Clk4-203ENSMUST00000109113 Skida1Q80YR3 822 aa11.7□□□□□ -0.54
Clk4-203ENSMUST00000109113 Zranb1Q7M760 708 aa11.63□□□□□ -0.55
Clk4-203ENSMUST00000109113 Gm35339A0A140LHH9 1649 aa11.61□□□□□ -0.55
Clk4-203ENSMUST00000109113 MpndQ3TV65 487 aa11.59□□□□□ -0.55
Clk4-203ENSMUST00000109113 Npm2Q80W85 207 aa11.58□□□□□ -0.56
Clk4-203ENSMUST00000109113 MyclP10166 368 aa11.52□□□□□ -0.57
Clk4-203ENSMUST00000109113 Nlrp6Q91WS2 869 aa11.49□□□□□ -0.57
Clk4-203ENSMUST00000109113 Znf710Q3U288 666 aa11.46□□□□□ -0.57
Clk4-203ENSMUST00000109113 Hmx1O70218 332 aa11.42□□□□□ -0.58
Clk4-203ENSMUST00000109113 St18Q80TY4 1045 aa11.41□□□□□ -0.58
Clk4-203ENSMUST00000109113 TMEM121BQ99MX7 572 aa11.41□□□□□ -0.58
Clk4-203ENSMUST00000109113 Lce6aD3YV94 81 aa11.38□□□□□ -0.59
Clk4-203ENSMUST00000109113 Jarid2Q62315 1234 aa11.31□□□□□ -0.6
Clk4-203ENSMUST00000109113 Dmrta2A2A9A2 531 aa11.25□□□□□ -0.61
Clk4-203ENSMUST00000109113 Lrrc43Q3V0L5 667 aa11.24□□□□□ -0.61
Clk4-203ENSMUST00000109113 Krtap28-10A0A1Y7VP58 119 aa11.2□□□□□ -0.62
Clk4-203ENSMUST00000109113 OsbpQ3B7Z2 805 aa11.2□□□□□ -0.62
Clk4-203ENSMUST00000109113 A0A1Y7VLE6 161 aa11.17□□□□□ -0.62
Clk4-203ENSMUST00000109113 NischQ80TM9 1593 aa11.17□□□□□ -0.62
Clk4-203ENSMUST00000109113 Scarf1Q5ND28 820 aa11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 64.9 ms