RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Uso1Q9Z1Z0 959 aaKnown RBP11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Letm1Q9Z2I0 738 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Top1Q04750 767 aaKnown RBP11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 BbxQ8VBW5 907 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Fbf1A2A870 1173 aa11.28□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Ptgs1P22437 602 aa11.28□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Zbtb45Q52KG4 520 aa11.28□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Msl1Q6PDM1 616 aa11.28□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Nyap1Q6PFX7 833 aa11.28□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Zbtb43Q9DAI4 467 aa11.28□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Frat1P70339 274 aa11.28□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Kmt5bQ3U8K7 883 aa11.28□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Trim52Q8CDV4 233 aa11.28□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Smc1aQ9CU62 1233 aaKnown RBP11.28□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Nol7Q9D7Z3 254 aaKnown RBP11.28□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Irs4Q9Z0Y7 1216 aa11.28□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Ube3aO08759 870 aa11.28□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Leo1Q5XJE5 667 aa11.28□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Fam114a1Q9D281 569 aa11.28□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Mkrn1Q9QXP6 481 aa11.28□□□□□ -0.6
Ldlr-201ENSMUST00000034713 IkQ9Z1M8 557 aaKnown RBP11.28□□□□□ -0.6
Ldlr-201ENSMUST00000034713 A0A1W2P7S8 802 aa11.27□□□□□ -0.6
Ldlr-201ENSMUST00000034713 TsksO54887 585 aa11.27□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Map2k1P31938 393 aa11.27□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Cdc5lQ6A068 802 aaKnown RBP11.27□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Rab3gap1Q80UJ7 981 aa11.27□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Egfl6Q9JJZ5 550 aa11.27□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Pkd2l2Q9JLG4 621 aa11.27□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Map7d1A2AJI0 846 aa11.27□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Pim2Q62070 370 aa11.27□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Sdad1Q80UZ2 687 aaKnown RBP11.27□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Sgsm1Q8BPQ7 1093 aa11.27□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Hook3Q8BUK6 718 aa11.27□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Slx1bQ8BX32 270 aa11.27□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Hs2st1Q8R3H7 356 aa11.27□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Nrxn1Q9CS84 1514 aa11.27□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Zbtb21E9Q444 1094 aa11.27□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Casp1P29452 402 aa11.27□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Cdr2P97817 455 aa11.27□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Pnpla2Q8BJ56 486 aa11.27□□□□□ -0.61
Ldlr-201ENSMUST00000034713 LratQ9JI60 231 aa11.27□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Dpf1Q9QX66 387 aa11.27□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Kcnh4A2A5F7 1018 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Mdm2P23804 489 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Acbd3Q8BMP6 525 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Rps6ka5Q8C050 863 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Arfgap2Q99K28 520 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Galntl5Q9D4M9 431 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 WtapQ9ER69 396 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Atp1a4Q9WV27 1032 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Cps1Q8C196 1500 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Gnat2P50149 354 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Timm10P62073 90 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Atp1b3P97370 278 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Hand2Q61039 217 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Tbc1d5Q80XQ2 815 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Nop2Q922K7 793 aaKnown RBP11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Antxr1Q9CZ52 562 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Klhl10Q9D5V2 608 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Rps6ka4Q9Z2B9 773 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 DnmbpQ6TXD4 1580 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Tbc1d31Q6NXY1 996 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Ccdc82Q6PG04 518 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Ncaph2Q8BSP2 607 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Cdan1Q8CC12 1239 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Cnot6lQ8VEG6 555 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 TnksQ6PFX9 1320 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Gm28919A0A087WP35 240 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Kifc2O08672 792 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Gm28047Q3US59 414 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Adora1Q60612 326 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Adam1aQ60813 791 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Pde1cQ64338 706 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Cc2d1bQ8BRN9 848 aa11.26□□□□□ -0.61
Ldlr-201ENSMUST00000034713 SsbP32067 415 aaKnown RBP11.25□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Nlrp1aQ2LKU9 1182 aa11.25□□□□□ -0.61
Ldlr-201ENSMUST00000034713 RragbQ6NTA4 374 aa11.25□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Ddx10Q80Y44 875 aaKnown RBP11.25□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Calcoco1Q8CGU1 691 aa11.25□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Zbtb1Q91VL9 713 aa11.25□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Acot9Q9R0X4 439 aaKnown RBP11.25□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Zc3h13E9Q784 1729 aaKnown RBP11.25□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Hmgb1P63158 215 aaKnown RBP11.25□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Zscan22Q8BGS5 496 aa11.25□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Dclk3Q8BWQ5 790 aa11.25□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Syce1Q9D495 329 aa11.25□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Mlh1Q9JK91 760 aa11.25□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Nwd1A6H603 1563 aa11.25□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Slc4a4O88343 1079 aa11.25□□□□□ -0.61
Ldlr-201ENSMUST00000034713 FanccP50652 591 aa11.25□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Ccdc148Q6P5U8 527 aa11.25□□□□□ -0.61
Ldlr-201ENSMUST00000034713 U2af2P26369 475 aaKnown RBP11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Opa1P58281 960 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 ClasrpQ8CFC7 668 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Vps16Q920Q4 839 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Golga5Q9QYE6 729 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Dennd3A2RT67 1274 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Gm10378F6XQQ1 160 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 MycnP03966 462 aaKnown RBP11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Plbd2Q3TCN2 594 aa11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms