RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C YKU80Q04437 629 aa6.28□□□□□ -1.4
VPS4YPR173C AIM33Q04516 312 aa6.28□□□□□ -1.4
VPS4YPR173C GTB1Q04924 702 aa6.28□□□□□ -1.4
VPS4YPR173C FLO1P32768 1537 aa6.28□□□□□ -1.4
VPS4YPR173C YML002WP0CF17 737 aa6.27□□□□□ -1.41
VPS4YPR173C TAL1P15019 335 aaKnown RBP6.27□□□□□ -1.41
VPS4YPR173C PRE8P23639 250 aa6.27□□□□□ -1.41
VPS4YPR173C EFB1P32471 206 aaKnown RBP6.27□□□□□ -1.41
VPS4YPR173C TOA1P32773 286 aa6.27□□□□□ -1.41
VPS4YPR173C YKL023WP36103 277 aaKnown RBP6.27□□□□□ -1.41
VPS4YPR173C SET3P36124 751 aa6.27□□□□□ -1.41
VPS4YPR173C PBP2P38151 413 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
VPS4YPR173C YBR032WP38223 100 aa6.27□□□□□ -1.41
VPS4YPR173C VHC1P38329 1120 aa6.27□□□□□ -1.41
VPS4YPR173C VPS45P38932 577 aa6.27□□□□□ -1.41
VPS4YPR173C END3P39013 349 aa6.27□□□□□ -1.41
VPS4YPR173C FIR1P40020 876 aa6.27□□□□□ -1.41
VPS4YPR173C SKP1P52286 194 aa6.27□□□□□ -1.41
VPS4YPR173C YPL062WQ02781 134 aa6.27□□□□□ -1.41
VPS4YPR173C RSA3Q05942 220 aaKnown RBP6.27□□□□□ -1.41
VPS4YPR173C TDA5Q06417 326 aaKnown RBP6.27□□□□□ -1.41
VPS4YPR173C YDL057WQ07379 328 aa6.27□□□□□ -1.41
VPS4YPR173C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
VPS4YPR173C VHS3Q08438 674 aa6.27□□□□□ -1.41
VPS4YPR173C ACM1Q08981 209 aa6.27□□□□□ -1.41
VPS4YPR173C WHI5Q12416 295 aa6.27□□□□□ -1.41
VPS4YPR173C NKP1Q12493 238 aa6.27□□□□□ -1.41
VPS4YPR173C RPP1AP05318 106 aaPredicted RBP6.26□□□□□ -1.41
VPS4YPR173C PCK1P10963 549 aa6.26□□□□□ -1.41
VPS4YPR173C SRM1P21827 482 aa6.26□□□□□ -1.41
VPS4YPR173C MSN1P22148 382 aa6.26□□□□□ -1.41
VPS4YPR173C PWP2P25635 923 aaKnown RBP6.26□□□□□ -1.41
VPS4YPR173C CAP1P28495 268 aaKnown RBP6.26□□□□□ -1.41
VPS4YPR173C CHS3P29465 1165 aa6.26□□□□□ -1.41
VPS4YPR173C TRM2P33753 639 aa6.26□□□□□ -1.41
VPS4YPR173C MSG5P38590 489 aa6.26□□□□□ -1.41
VPS4YPR173C BEM4P39011 633 aa6.26□□□□□ -1.41
VPS4YPR173C DAS1P47005 663 aa6.26□□□□□ -1.41
VPS4YPR173C ZIP2P53061 704 aa6.26□□□□□ -1.41
VPS4YPR173C LSB1P53281 241 aa6.26□□□□□ -1.41
VPS4YPR173C PGA2P53903 129 aa6.26□□□□□ -1.41
VPS4YPR173C NAM8Q00539 523 aaKnown RBP6.26□□□□□ -1.41
VPS4YPR173C ATP25Q03153 612 aa6.26□□□□□ -1.41
VPS4YPR173C ATG16Q03818 150 aa6.26□□□□□ -1.41
VPS4YPR173C SKG3Q06315 1026 aa6.26□□□□□ -1.41
VPS4YPR173C RLP24Q07915 199 aaKnown RBP6.26□□□□□ -1.41
VPS4YPR173C ILV1P00927 576 aaKnown RBP6.25□□□□□ -1.41
VPS4YPR173C GCR1P07261 785 aa6.25□□□□□ -1.41
VPS4YPR173C SNA3P14359 133 aa6.25□□□□□ -1.41
VPS4YPR173C HEM15P16622 393 aa6.25□□□□□ -1.41
VPS4YPR173C CBF1P17106 351 aa6.25□□□□□ -1.41
VPS4YPR173C PUP2P32379 260 aa6.25□□□□□ -1.41
VPS4YPR173C EXO5P38289 585 aa6.25□□□□□ -1.41
VPS4YPR173C RFC3P38629 340 aa6.25□□□□□ -1.41
VPS4YPR173C PAN5P38787 379 aa6.25□□□□□ -1.41
VPS4YPR173C ACO2P39533 789 aa6.25□□□□□ -1.41
VPS4YPR173C SEC27P41811 889 aaKnown RBP6.25□□□□□ -1.41
VPS4YPR173C COS6P53344 381 aa6.25□□□□□ -1.41
VPS4YPR173C ALD6P54115 500 aaKnown RBP6.25□□□□□ -1.41
VPS4YPR173C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41 RIP-Chip
VPS4YPR173C LGE1Q02796 332 aaKnown RBP6.25□□□□□ -1.41
VPS4YPR173C TY1A-MR1Q04215 440 aa6.25□□□□□ -1.41
VPS4YPR173C IRC3Q06683 689 aa6.25□□□□□ -1.41
VPS4YPR173C YPT6Q99260 215 aa6.25□□□□□ -1.41
VPS4YPR173C THS1P04801 734 aaKnown RBP6.25□□□□□ -1.41
VPS4YPR173C PHO8P11491 566 aa6.25□□□□□ -1.41
VPS4YPR173C PUF4P25339 888 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
VPS4YPR173C KIP1P28742 1111 aa6.25□□□□□ -1.41
VPS4YPR173C DBF4P32325 704 aa6.25□□□□□ -1.41
VPS4YPR173C SEG2P34250 1132 aa6.25□□□□□ -1.41
VPS4YPR173C CCL1P37366 393 aa6.25□□□□□ -1.41
VPS4YPR173C MRPL16P38064 232 aa6.25□□□□□ -1.41
VPS4YPR173C GIP1P38229 639 aa6.25□□□□□ -1.41
VPS4YPR173C SUL1P38359 859 aa6.25□□□□□ -1.41
VPS4YPR173C TDA11P38854 504 aa6.25□□□□□ -1.41
VPS4YPR173C SPC97P38863 823 aa6.25□□□□□ -1.41
VPS4YPR173C RAD55P38953 406 aa6.25□□□□□ -1.41
VPS4YPR173C ALG5P40350 334 aa6.25□□□□□ -1.41
VPS4YPR173C NTA1P40354 457 aa6.25□□□□□ -1.41
VPS4YPR173C JEM1P40358 645 aa6.25□□□□□ -1.41
VPS4YPR173C GCN20P43535 752 aaKnown RBP6.25□□□□□ -1.41
VPS4YPR173C MCM6P53091 1017 aaKnown RBP6.25□□□□□ -1.41
VPS4YPR173C HOP2P53187 214 aa6.25□□□□□ -1.41
VPS4YPR173C INP2Q03824 705 aa6.25□□□□□ -1.41
VPS4YPR173C YMR027WQ04371 470 aa6.25□□□□□ -1.41
VPS4YPR173C ERV41Q04651 352 aa6.25□□□□□ -1.41
VPS4YPR173C CUR1Q06469 252 aa6.25□□□□□ -1.41
VPS4YPR173C RRP15Q06511 250 aaPredicted RBP6.25□□□□□ -1.41
VPS4YPR173C GPI13Q07830 1017 aa6.25□□□□□ -1.41
VPS4YPR173C PCL8Q08966 492 aa6.25□□□□□ -1.41
VPS4YPR173C CDC53Q12018 815 aaKnown RBP6.25□□□□□ -1.41
VPS4YPR173C MNL2Q12205 849 aa6.25□□□□□ -1.41
VPS4YPR173C STB3Q12427 513 aa6.25□□□□□ -1.41
VPS4YPR173C HKR1P41809 1802 aa6.24□□□□□ -1.41
VPS4YPR173C CDC33P07260 213 aaKnown RBP6.24□□□□□ -1.41
VPS4YPR173C CHS2P14180 963 aa6.24□□□□□ -1.41
VPS4YPR173C TYR1P20049 452 aa6.24□□□□□ -1.41
VPS4YPR173C SFL1P20134 766 aa6.24□□□□□ -1.41
VPS4YPR173C MLS1P30952 554 aa6.24□□□□□ -1.41
VPS4YPR173C PYC2P32327 1180 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms