RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W SHQ1P40486 507 aaPredicted RBP3.92□□□□□ -1.78
ABP140YOR239W SER33P40510 469 aa3.92□□□□□ -1.78
ABP140YOR239W FMP33P46998 180 aa3.92□□□□□ -1.78
ABP140YOR239W YJL055WP47044 245 aa3.92□□□□□ -1.78
ABP140YOR239W RAD17P48581 401 aa3.92□□□□□ -1.78
ABP140YOR239W PAN2P53010 1115 aaPredicted RBP3.92□□□□□ -1.78
ABP140YOR239W LIF1P53150 421 aa3.92□□□□□ -1.78
ABP140YOR239W EFM5P53200 248 aaKnown RBP3.92□□□□□ -1.78
ABP140YOR239W TOF1P53840 1238 aa3.92□□□□□ -1.78
ABP140YOR239W SRT1Q03175 343 aa3.92□□□□□ -1.78
ABP140YOR239W RVB1Q03940 463 aaKnown RBP3.92□□□□□ -1.78
ABP140YOR239W HMO1Q03973 246 aaKnown RBP3.92□□□□□ -1.78
ABP140YOR239W MRX10Q05648 414 aa3.92□□□□□ -1.78
ABP140YOR239W DXO1Q06349 442 aa3.92□□□□□ -1.78
ABP140YOR239W ARV1Q06541 321 aa3.92□□□□□ -1.78
ABP140YOR239W YEH2Q07950 538 aa3.92□□□□□ -1.78
ABP140YOR239W SGO1Q08490 590 aa3.92□□□□□ -1.78
ABP140YOR239W BUG1Q12191 341 aa3.92□□□□□ -1.78
ABP140YOR239W RUP1Q12242 671 aa3.92□□□□□ -1.78
ABP140YOR239W YRF1-2P40105 1681 aa3.92□□□□□ -1.78
ABP140YOR239W GPA2P10823 449 aa3.92□□□□□ -1.78
ABP140YOR239W SSB1P11484 613 aaKnown RBP3.92□□□□□ -1.78
ABP140YOR239W YAK1P14680 807 aa3.92□□□□□ -1.78
ABP140YOR239W RDS2P19541 446 aaKnown RBP3.92□□□□□ -1.78
ABP140YOR239W CLB3P24870 427 aa3.92□□□□□ -1.78
ABP140YOR239W MEF1P25039 761 aa3.92□□□□□ -1.78
ABP140YOR239W ILV6P25605 309 aaKnown RBP3.92□□□□□ -1.78
ABP140YOR239W MCM4P30665 933 aaKnown RBP3.92□□□□□ -1.78
ABP140YOR239W XRS2P33301 854 aa3.92□□□□□ -1.78
ABP140YOR239W SHM1P37292 490 aaPredicted RBP3.92□□□□□ -1.78
ABP140YOR239W SDH8P38345 138 aa3.92□□□□□ -1.78
ABP140YOR239W YBR287WP38355 427 aa3.92□□□□□ -1.78
ABP140YOR239W MEF2P39677 819 aa3.92□□□□□ -1.78
ABP140YOR239W SSB2P40150 613 aaKnown RBP3.92□□□□□ -1.78
ABP140YOR239W XKS1P42826 600 aa3.92□□□□□ -1.78
ABP140YOR239W SNZ3P43545 298 aa3.92□□□□□ -1.78
ABP140YOR239W SWP82P43554 623 aa3.92□□□□□ -1.78
ABP140YOR239W MNN11P46985 422 aaKnown RBP3.92□□□□□ -1.78
ABP140YOR239W RIM21P48565 533 aa3.92□□□□□ -1.78
ABP140YOR239W ATG1P53104 897 aa3.92□□□□□ -1.78
ABP140YOR239W PUS6P53294 404 aa3.92□□□□□ -1.78
ABP140YOR239W SNZ2P53824 298 aa3.92□□□□□ -1.78
ABP140YOR239W PTA1Q01329 785 aaPredicted RBP3.92□□□□□ -1.78
ABP140YOR239W UTP5Q04177 643 aaKnown RBP3.92□□□□□ -1.78
ABP140YOR239W GFD1Q04839 188 aaKnown RBP3.92□□□□□ -1.78
ABP140YOR239W ARP9Q05123 467 aa3.92□□□□□ -1.78
ABP140YOR239W VPS36Q06696 566 aa3.92□□□□□ -1.78
ABP140YOR239W SIL1Q08199 421 aa3.92□□□□□ -1.78
ABP140YOR239W BRX1Q08235 291 aaKnown RBP3.92□□□□□ -1.78
ABP140YOR239W ATG29Q12092 213 aa3.92□□□□□ -1.78
ABP140YOR239W SEM1O94742 89 aa3.91□□□□□ -1.78
ABP140YOR239W PGI1P12709 554 aaKnown RBP3.91□□□□□ -1.78
ABP140YOR239W STF2P16965 84 aa3.91□□□□□ -1.78
ABP140YOR239W KIN3P22209 435 aa3.91□□□□□ -1.78
ABP140YOR239W LCB1P25045 558 aaKnown RBP3.91□□□□□ -1.78
ABP140YOR239W EUG1P32474 517 aa3.91□□□□□ -1.78
ABP140YOR239W SUV3P32580 737 aa3.91□□□□□ -1.78
ABP140YOR239W YBL055CP34220 418 aaPredicted RBP3.91□□□□□ -1.78
ABP140YOR239W PXA2P34230 853 aa3.91□□□□□ -1.78
ABP140YOR239W OTU2P38747 307 aaKnown RBP3.91□□□□□ -1.78
ABP140YOR239W YER137CP40083 148 aaKnown RBP3.91□□□□□ -1.78
ABP140YOR239W MEP1P40260 492 aa3.91□□□□□ -1.78
ABP140YOR239W PAC11P40960 533 aa3.91□□□□□ -1.78
ABP140YOR239W YFL066CP43538 392 aa3.91□□□□□ -1.78
ABP140YOR239W YNL040WP53960 456 aaPredicted RBP3.91□□□□□ -1.78
ABP140YOR239W LGE1Q02796 332 aaKnown RBP3.91□□□□□ -1.78
ABP140YOR239W ISU1Q03020 165 aa3.91□□□□□ -1.78
ABP140YOR239W ABZ2Q03266 374 aa3.91□□□□□ -1.78
ABP140YOR239W VPS64Q03944 604 aa3.91□□□□□ -1.78
ABP140YOR239W GPI17Q04080 534 aa3.91□□□□□ -1.78
ABP140YOR239W SHE9Q04172 456 aa3.91□□□□□ -1.78
ABP140YOR239W YMR018WQ04364 514 aa3.91□□□□□ -1.78
ABP140YOR239W GLO2Q05584 274 aa3.91□□□□□ -1.78
ABP140YOR239W SUB2Q07478 446 aaKnown RBP3.91□□□□□ -1.78
ABP140YOR239W YDL114WQ07530 308 aa3.91□□□□□ -1.78
ABP140YOR239W NEW1Q08972 1196 aaKnown RBP3.91□□□□□ -1.78
ABP140YOR239W TRM8Q12009 286 aa3.91□□□□□ -1.78
ABP140YOR239W ICL2Q12031 575 aa3.91□□□□□ -1.78
ABP140YOR239W MDM20Q12387 796 aaKnown RBP3.91□□□□□ -1.78
ABP140YOR239W EMP46Q12396 444 aa3.91□□□□□ -1.78
ABP140YOR239W BCK1Q01389 1478 aa3.91□□□□□ -1.78
ABP140YOR239W IPP1P00817 287 aaKnown RBP3.9□□□□□ -1.78
ABP140YOR239W RPL6BP05739 176 aaKnown RBP3.9□□□□□ -1.78
ABP140YOR239W SPS1P08458 490 aa3.9□□□□□ -1.78
ABP140YOR239W MPH2P0CD99 609 aa3.9□□□□□ -1.78
ABP140YOR239W SRV2P17555 526 aaKnown RBP3.9□□□□□ -1.78
ABP140YOR239W SDH2P21801 266 aa3.9□□□□□ -1.78
ABP140YOR239W URE2P23202 354 aaKnown RBP3.9□□□□□ -1.78
ABP140YOR239W VPS3P23643 1011 aa3.9□□□□□ -1.78
ABP140YOR239W SPB1P25582 841 aaPredicted RBP3.9□□□□□ -1.78
ABP140YOR239W PAT1P25644 796 aaKnown RBP3.9□□□□□ -1.78
ABP140YOR239W PEP3P27801 918 aa3.9□□□□□ -1.78
ABP140YOR239W MEI4P29467 408 aa3.9□□□□□ -1.78
ABP140YOR239W CRM1P30822 1084 aaKnown RBP3.9□□□□□ -1.78
ABP140YOR239W MLS1P30952 554 aa3.9□□□□□ -1.78
ABP140YOR239W ACH1P32316 526 aa3.9□□□□□ -1.78
ABP140YOR239W YME1P32795 747 aa3.9□□□□□ -1.78
ABP140YOR239W NTH2P35172 780 aa3.9□□□□□ -1.78
ABP140YOR239W CPR5P35176 225 aa3.9□□□□□ -1.78
ABP140YOR239W MRPL17P36528 281 aa3.9□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms