RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeast

Gene SHR5, Length 714 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHR5	YOL110W	ATP1	P07251	545 aa	Known RBP	15.22	■□□□□ 0.03
SHR5	YOL110W	SEC1	P30619	724 aa	Known RBP	15.22	■□□□□ 0.03
SHR5	YOL110W	TKL2	P33315	681 aa		15.22	■□□□□ 0.03
SHR5	YOL110W	TMN3	P40071	706 aa		15.22	■□□□□ 0.03
SHR5	YOL110W	MAD1	P40957	749 aa		15.22	■□□□□ 0.03
SHR5	YOL110W	PFD1	P46988	109 aa		15.22	■□□□□ 0.03
SHR5	YOL110W	ASG7	P46993	209 aa		15.22	■□□□□ 0.03
SHR5	YOL110W	MRI1	Q06489	411 aa	Known RBP	15.22	■□□□□ 0.03
SHR5	YOL110W	SFI1	Q12369	946 aa		15.22	■□□□□ 0.03
SHR5	YOL110W	RFS1	P38234	210 aa	Known RBP	15.21	■□□□□ 0.03
SHR5	YOL110W	RGD1	P38339	666 aa		15.21	■□□□□ 0.03
SHR5	YOL110W	PCM1	P38628	557 aa	Known RBP	15.21	■□□□□ 0.03
SHR5	YOL110W	PMC1	P38929	1173 aa	Predicted RBP	15.21	■□□□□ 0.03
SHR5	YOL110W	RPC17	P47076	161 aa		15.21	■□□□□ 0.03
SHR5	YOL110W	EAR1	Q03212	550 aa		15.21	■□□□□ 0.03
SHR5	YOL110W	PRM6	Q04705	352 aa		15.21	■□□□□ 0.03
SHR5	YOL110W	IVY1	Q04934	453 aa		15.21	■□□□□ 0.03
SHR5	YOL110W	DIS3	Q08162	1001 aa	Known RBP	15.21	■□□□□ 0.03
SHR5	YOL110W	AIM39	Q08223	395 aa		15.21	■□□□□ 0.03
SHR5	YOL110W	SPO21	Q12411	609 aa		15.21	■□□□□ 0.03
SHR5	YOL110W	AHC1	Q12433	566 aa		15.21	■□□□□ 0.03
SHR5	YOL110W	PUT4	P15380	627 aa		15.2	■□□□□ 0.02
SHR5	YOL110W	YBL055C	P34220	418 aa	Predicted RBP	15.2	■□□□□ 0.02
SHR5	YOL110W	YBR284W	P38150	797 aa		15.2	■□□□□ 0.02
SHR5	YOL110W	APM2	P38700	605 aa		15.2	■□□□□ 0.02
SHR5	YOL110W	TGL3	P40308	642 aa		15.2	■□□□□ 0.02
SHR5	YOL110W	TAF1	P46677	1066 aa		15.2	■□□□□ 0.02
SHR5	YOL110W	YNL011C	P53980	444 aa		15.2	■□□□□ 0.02
SHR5	YOL110W	ADA2	Q02336	434 aa		15.2	■□□□□ 0.02
SHR5	YOL110W	HEH2	Q03281	663 aa		15.2	■□□□□ 0.02
SHR5	YOL110W	APM4	Q99186	491 aa		15.2	■□□□□ 0.02
SHR5	YOL110W	AEP2	P22136	580 aa		15.19	■□□□□ 0.02
SHR5	YOL110W	GCS1	P35197	352 aa		15.19	■□□□□ 0.02
SHR5	YOL110W	ABZ1	P37254	787 aa	Predicted RBP	15.19	■□□□□ 0.02
SHR5	YOL110W	RAD55	P38953	406 aa		15.19	■□□□□ 0.02
SHR5	YOL110W	UFO1	Q04511	668 aa		15.19	■□□□□ 0.02
SHR5	YOL110W	YDR278C	Q05612	105 aa		15.19	■□□□□ 0.02
SHR5	YOL110W	APC5	Q08683	685 aa		15.19	■□□□□ 0.02
SHR5	YOL110W	YLR422W	Q06409	1932 aa		15.18	■□□□□ 0.02
SHR5	YOL110W	PDR1	P12383	1068 aa		15.18	■□□□□ 0.02
SHR5	YOL110W	SRB2	P34162	210 aa		15.18	■□□□□ 0.02
SHR5	YOL110W	MMF1	P40185	145 aa	Known RBP	15.18	■□□□□ 0.02
SHR5	YOL110W	INP52	P50942	1183 aa		15.18	■□□□□ 0.02
SHR5	YOL110W	NOG2	P53742	486 aa	Known RBP	15.18	■□□□□ 0.02
SHR5	YOL110W	SLG1	P54867	378 aa		15.18	■□□□□ 0.02
SHR5	YOL110W	TAF9	Q05027	157 aa		15.18	■□□□□ 0.02
SHR5	YOL110W	YRR1	Q12172	810 aa		15.18	■□□□□ 0.02
SHR5	YOL110W	HRT3	Q12347	344 aa		15.18	■□□□□ 0.02
SHR5	YOL110W	VPS5	Q92331	675 aa		15.18	■□□□□ 0.02
SHR5	YOL110W	PMS1	P14242	873 aa		15.17	■□□□□ 0.02
SHR5	YOL110W	CCT4	P39078	528 aa	Known RBP	15.17	■□□□□ 0.02
SHR5	YOL110W	FMP10	P40098	244 aa		15.17	■□□□□ 0.02
SHR5	YOL110W	URH1	Q04179	340 aa		15.17	■□□□□ 0.02
SHR5	YOL110W	RRB1	Q04225	511 aa	Known RBP	15.17	■□□□□ 0.02
SHR5	YOL110W	ECI1	Q05871	280 aa		15.17	■□□□□ 0.02
SHR5	YOL110W	DDC1	Q08949	612 aa		15.17	■□□□□ 0.02
SHR5	YOL110W	LEA1	Q08963	238 aa	Predicted RBP	15.17	■□□□□ 0.02
SHR5	YOL110W	AIM41	Q12032	185 aa		15.17	■□□□□ 0.02
SHR5	YOL110W	NBP2	Q12163	236 aa		15.17	■□□□□ 0.02
SHR5	YOL110W	MAS1	P10507	462 aa		15.16	■□□□□ 0.02
SHR5	YOL110W	TRX1	P22217	103 aa	Known RBP	15.16	■□□□□ 0.02
SHR5	YOL110W	MET4	P32389	672 aa		15.16	■□□□□ 0.02
SHR5	YOL110W	PEX2	P32800	271 aa		15.16	■□□□□ 0.02
SHR5	YOL110W	CNS1	P33313	385 aa		15.16	■□□□□ 0.02
SHR5	YOL110W	RRP1	P35178	278 aa	Predicted RBP	15.16	■□□□□ 0.02
SHR5	YOL110W	SWC5	P38326	303 aa		15.16	■□□□□ 0.02
SHR5	YOL110W	ATG23	Q06671	453 aa		15.16	■□□□□ 0.02
SHR5	YOL110W	RCL1	Q08096	367 aa	Predicted RBP	15.16	■□□□□ 0.02
SHR5	YOL110W	CIR2	Q08822	631 aa		15.16	■□□□□ 0.02
SHR5	YOL110W	MNL2	Q12205	849 aa		15.16	■□□□□ 0.02
SHR5	YOL110W	IDI1	P15496	288 aa		15.15	■□□□□ 0.02
SHR5	YOL110W	SAK1	P38990	1142 aa		15.15	■□□□□ 0.02
SHR5	YOL110W	FAF1	P40546	346 aa	Predicted RBP	15.15	■□□□□ 0.02
SHR5	YOL110W	VTI1	Q04338	217 aa		15.15	■□□□□ 0.02
SHR5	YOL110W	RAD27	P26793	382 aa		15.14	■□□□□ 0.01
SHR5	YOL110W	LYS9	P38999	446 aa		15.14	■□□□□ 0.01
SHR5	YOL110W	KHA1	P40309	873 aa		15.14	■□□□□ 0.01
SHR5	YOL110W	YIL054W	P40524	105 aa		15.14	■□□□□ 0.01
SHR5	YOL110W	GUF1	P46943	645 aa		15.14	■□□□□ 0.01
SHR5	YOL110W	VTC4	P47075	721 aa		15.14	■□□□□ 0.01
SHR5	YOL110W	PRP31	P49704	494 aa	Predicted RBP	15.14	■□□□□ 0.01
SHR5	YOL110W	YNL247W	P53852	767 aa	Known RBP	15.14	■□□□□ 0.01
SHR5	YOL110W	SPO71	Q03868	1245 aa		15.14	■□□□□ 0.01
SHR5	YOL110W	THI20	Q08224	551 aa		15.14	■□□□□ 0.01
SHR5	YOL110W	PGS1	P25578	521 aa		15.13	■□□□□ 0.01
SHR5	YOL110W	CAP1	P28495	268 aa	Known RBP	15.13	■□□□□ 0.01
SHR5	YOL110W	YBR056W	P38081	501 aa		15.13	■□□□□ 0.01
SHR5	YOL110W	HSL7	P38274	827 aa		15.13	■□□□□ 0.01
SHR5	YOL110W	END3	P39013	349 aa		15.13	■□□□□ 0.01
SHR5	YOL110W	SAP185	P40856	1058 aa		15.13	■□□□□ 0.01
SHR5	YOL110W	VPS25	P47142	202 aa		15.13	■□□□□ 0.01
SHR5	YOL110W	RIM8	P53179	542 aa		15.13	■□□□□ 0.01
SHR5	YOL110W	YNL108C	P53929	270 aa		15.13	■□□□□ 0.01
SHR5	YOL110W	POL3	P15436	1097 aa		15.12	■□□□□ 0.01
SHR5	YOL110W	GCG1	P32656	232 aa	Known RBP	15.12	■□□□□ 0.01
SHR5	YOL110W	PCA1	P38360	1216 aa		15.12	■□□□□ 0.01
SHR5	YOL110W	YIR016W	P40572	265 aa		15.12	■□□□□ 0.01
SHR5	YOL110W	YML6	P51998	286 aa		15.12	■□□□□ 0.01
SHR5	YOL110W	YPL062W	Q02781	134 aa		15.12	■□□□□ 0.01
SHR5	YOL110W	ELP3	Q02908	557 aa	Known RBP	15.12	■□□□□ 0.01

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms