RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	GCN5	Q03330	439 aa		3.23	□□□□□ -1.89
SKP2	YNL311C	YML096W	Q04489	525 aa		3.23	□□□□□ -1.89
SKP2	YNL311C	SMD2	Q06217	110 aa	Known RBP	3.23	□□□□□ -1.89
SKP2	YNL311C	THI73	Q07904	523 aa		3.23	□□□□□ -1.89
SKP2	YNL311C	SKM1	Q12469	655 aa		3.23	□□□□□ -1.89
SKP2	YNL311C	STI1	P15705	589 aa	Known RBP RIP-Chip data	3.22	□□□□□ -1.89	not detected
SKP2	YNL311C	PRI2	P20457	528 aa		3.22	□□□□□ -1.89
SKP2	YNL311C	CIN8	P27895	1000 aa		3.22	□□□□□ -1.89
SKP2	YNL311C	PIM1	P36775	1133 aa		3.22	□□□□□ -1.89
SKP2	YNL311C	PGM2	P37012	569 aa	Known RBP	3.22	□□□□□ -1.89
SKP2	YNL311C	CUE3	P53137	624 aa	Known RBP	3.22	□□□□□ -1.89
SKP2	YNL311C	VTC3	Q02725	835 aa		3.22	□□□□□ -1.89
SKP2	YNL311C	SNU56	Q03782	492 aa	Known RBP	3.22	□□□□□ -1.89
SKP2	YNL311C	RTN1	Q04947	295 aa	Known RBP	3.22	□□□□□ -1.89
SKP2	YNL311C	ECM22	Q05958	814 aa	Predicted RBP	3.22	□□□□□ -1.89
SKP2	YNL311C	LCB5	Q06147	687 aa	Known RBP	3.22	□□□□□ -1.89
SKP2	YNL311C	CDC45	Q08032	650 aa		3.22	□□□□□ -1.89
SKP2	YNL311C	SAM4	Q08985	325 aa	Known RBP	3.22	□□□□□ -1.89
SKP2	YNL311C	TRA1	P38811	3744 aa		3.22	□□□□□ -1.89
SKP2	YNL311C	PEP3	P27801	918 aa		3.22	□□□□□ -1.89
SKP2	YNL311C	HSP78	P33416	811 aa		3.22	□□□□□ -1.89
SKP2	YNL311C	TBS1	P38114	1094 aa		3.22	□□□□□ -1.89
SKP2	YNL311C	ECM13	P38195	257 aa		3.22	□□□□□ -1.89
SKP2	YNL311C	RRN7	P40992	514 aa		3.22	□□□□□ -1.89
SKP2	YNL311C	CUR1	Q06469	252 aa		3.22	□□□□□ -1.89
SKP2	YNL311C	SRO7	Q12038	1033 aa		3.22	□□□□□ -1.89
SKP2	YNL311C	FRE7	Q12333	620 aa		3.22	□□□□□ -1.89
SKP2	YNL311C	RPL4A	P10664	362 aa	Known RBP	3.21	□□□□□ -1.9
SKP2	YNL311C	SCJ1	P25303	377 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	TYE7	P33122	291 aa	Predicted RBP	3.21	□□□□□ -1.9
SKP2	YNL311C	PET10	P36139	283 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	YBR056W	P38081	501 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	RGA1	P39083	1007 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	YJL070C	P40361	888 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	RPL4B	P49626	362 aa	Known RBP	3.21	□□□□□ -1.9
SKP2	YNL311C	NAF1	P53919	492 aa	Known RBP	3.21	□□□□□ -1.9
SKP2	YNL311C	YMR018W	Q04364	514 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	CEX1	Q12453	761 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	YOL098C	Q12496	1037 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	ASP3-2	P0CX77	362 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	ASP3-3	P0CX78	362 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	ASP3-4	P0CX79	362 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	ASP3-1	P0CZ17	362 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	YJU3	P28321	313 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	DAL1	P32375	460 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	YSC83	P32792	385 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	FHL1	P39521	936 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	AVT2	P39981	480 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	FAU1	P40099	211 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	ASN1	P49089	572 aa	Known RBP	3.21	□□□□□ -1.9
SKP2	YNL311C	YNL092W	P53934	400 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	YSH1	Q06224	779 aa	Predicted RBP	3.21	□□□□□ -1.9
SKP2	YNL311C	CDA1	Q06702	301 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
SKP2	YNL311C	LCB4	Q12246	624 aa		3.21	□□□□□ -1.9
SKP2	YNL311C	TY1A-DR4	O74302	440 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	TY1A-H	P0C2I4	478 aa	Known RBP	3.2	□□□□□ -1.9
SKP2	YNL311C	TY1A-A	P0CX57	440 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	TY1A-PR1	P0CX58	440 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	TY1A-OR	P0CX59	440 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	TY1A-PR2	P0CX60	440 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	TY1A-DR5	P0CX65	440 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	TY1A-ER2	P0CX66	440 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	TY1A-GR3	P0CX67	440 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	TY1A-LR1	P0CX68	440 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	TY1A-MR2	P0CX69	440 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	SBP1	P10080	294 aa	Known RBP	3.2	□□□□□ -1.9
SKP2	YNL311C	PYC1	P11154	1178 aa	Known RBP	3.2	□□□□□ -1.9
SKP2	YNL311C	TAF13	P11747	167 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	not detected
SKP2	YNL311C	TY1A-JR2	P47099	440 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	ORC5	P50874	479 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	VEL1	P53058	206 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	not detected
SKP2	YNL311C	GCR2	Q01722	534 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	MTD1	Q02046	320 aa	Known RBP	3.2	□□□□□ -1.9
SKP2	YNL311C	TY1A-DR1	Q03856	440 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	TY1A-ML1	Q04706	440 aa	Known RBP	3.2	□□□□□ -1.9
SKP2	YNL311C	TMS1	Q12116	473 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	TY1A-BR	Q12217	440 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	LPX1	Q12405	387 aa	Known RBP	3.2	□□□□□ -1.9
SKP2	YNL311C	TY1A-NL2	Q12470	440 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	TY1A-GR2	Q12485	440 aa		3.2	□□□□□ -1.9
SKP2	YNL311C	POL30	P15873	258 aa	Known RBP	3.19	□□□□□ -1.9
SKP2	YNL311C	THR4	P16120	514 aa	Known RBP	3.19	□□□□□ -1.9
SKP2	YNL311C	CWP1	P28319	239 aa		3.19	□□□□□ -1.9
SKP2	YNL311C	BMH2	P34730	273 aa	Known RBP	3.19	□□□□□ -1.9
SKP2	YNL311C	MNN4	P36044	1178 aa		3.19	□□□□□ -1.9
SKP2	YNL311C	EXO1	P39875	702 aa		3.19	□□□□□ -1.9
SKP2	YNL311C	UFE1	P41834	346 aa		3.19	□□□□□ -1.9
SKP2	YNL311C	SET2	P46995	733 aa	Known RBP	3.19	□□□□□ -1.9
SKP2	YNL311C	PGA2	P53903	129 aa		3.19	□□□□□ -1.9
SKP2	YNL311C	AQR1	P53943	586 aa		3.19	□□□□□ -1.9
SKP2	YNL311C	SEC2	P17065	759 aa		3.19	□□□□□ -1.9
SKP2	YNL311C	NAM7	P30771	971 aa	Known RBP	3.19	□□□□□ -1.9
SKP2	YNL311C	ASF1	P32447	279 aa		3.19	□□□□□ -1.9
SKP2	YNL311C	PXA2	P34230	853 aa		3.19	□□□□□ -1.9
SKP2	YNL311C	OPY1	P38271	328 aa		3.19	□□□□□ -1.9
SKP2	YNL311C	ELO1	P39540	310 aa		3.19	□□□□□ -1.9
SKP2	YNL311C	GUF1	P46943	645 aa		3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 28 ms