RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W SNP1Q00916 300 aaPredicted RBP3.44□□□□□ -1.86
SEC22YLR268W UFO1Q04511 668 aa3.44□□□□□ -1.86
SEC22YLR268W VBA3P25594 458 aa3.43□□□□□ -1.86
SEC22YLR268W EUG1P32474 517 aa3.43□□□□□ -1.86
SEC22YLR268W APN2P38207 520 aa3.43□□□□□ -1.86
SEC22YLR268W YNL195CP40168 261 aa3.43□□□□□ -1.86
SEC22YLR268W CAF16P43569 289 aa3.43□□□□□ -1.86
SEC22YLR268W SET2P46995 733 aaKnown RBP3.43□□□□□ -1.86
SEC22YLR268W HUL5P53119 910 aa3.43□□□□□ -1.86
SEC22YLR268W CPR8P53728 308 aa3.43□□□□□ -1.86
SEC22YLR268W LEU2P04173 364 aaPredicted RBP3.42□□□□□ -1.86
SEC22YLR268W MIH1P23748 554 aa3.42□□□□□ -1.86
SEC22YLR268W AAD3P25612 363 aa3.42□□□□□ -1.86
SEC22YLR268W BEM3P32873 1128 aa3.42□□□□□ -1.86
SEC22YLR268W HSL7P38274 827 aa3.42□□□□□ -1.86
SEC22YLR268W GDH3P39708 457 aa3.42□□□□□ -1.86
SEC22YLR268W DIP5P53388 608 aa3.42□□□□□ -1.86
SEC22YLR268W ARP4P80428 489 aa3.42□□□□□ -1.86
SEC22YLR268W ERG20P08524 352 aaKnown RBP3.41□□□□□ -1.86
SEC22YLR268W TUP1P16649 713 aa3.41□□□□□ -1.86
SEC22YLR268W YIL077CP40508 320 aa3.41□□□□□ -1.86
SEC22YLR268W LEE1Q02799 301 aaKnown RBP3.41□□□□□ -1.86
SEC22YLR268W POM34Q12445 299 aa3.41□□□□□ -1.86
SEC22YLR268W YOR131CQ12486 218 aa3.41□□□□□ -1.86
SEC22YLR268W TSR4P25040 408 aa3.4□□□□□ -1.87
SEC22YLR268W SPC97P38863 823 aa3.4□□□□□ -1.87
SEC22YLR268W ATG36P46983 293 aa3.4□□□□□ -1.87
SEC22YLR268W ATP23P53722 227 aa3.4□□□□□ -1.87
SEC22YLR268W BRE5P53741 515 aaKnown RBP3.4□□□□□ -1.87
SEC22YLR268W DAK1P54838 584 aaKnown RBP3.4□□□□□ -1.87
SEC22YLR268W NHX1Q04121 633 aa3.4□□□□□ -1.87
SEC22YLR268W YFT2Q06676 274 aa3.4□□□□□ -1.87
SEC22YLR268W VPS36Q06696 566 aa3.4□□□□□ -1.87
SEC22YLR268W IZH3Q07959 543 aa3.4□□□□□ -1.87
SEC22YLR268W CDC53Q12018 815 aaKnown RBP3.4□□□□□ -1.87
SEC22YLR268W FRE7Q12333 620 aa3.4□□□□□ -1.87
SEC22YLR268W CIT2P08679 460 aa3.39□□□□□ -1.87
SEC22YLR268W YPT7P32939 208 aa3.39□□□□□ -1.87
SEC22YLR268W CHZ1P40019 153 aaPredicted RBP3.39□□□□□ -1.87
SEC22YLR268W NMD5P46970 1048 aa3.39□□□□□ -1.87
SEC22YLR268W MAL11P53048 616 aa3.39□□□□□ -1.87
SEC22YLR268W ERG13P54839 491 aaKnown RBP3.39□□□□□ -1.87
SEC22YLR268W NEW1Q08972 1196 aaKnown RBP3.39□□□□□ -1.87
SEC22YLR268W STI1P15705 589 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
SEC22YLR268W PMA2P19657 947 aa3.38□□□□□ -1.87
SEC22YLR268W COS111P38308 924 aa3.38□□□□□ -1.87
SEC22YLR268W PCI8P40512 444 aa3.38□□□□□ -1.87
SEC22YLR268W GSY1P23337 708 aa3.37□□□□□ -1.87
SEC22YLR268W HOG1P32485 435 aa3.37□□□□□ -1.87
SEC22YLR268W ASK1P35734 292 aa3.37□□□□□ -1.87
SEC22YLR268W PXL1P36166 706 aa3.37□□□□□ -1.87
SEC22YLR268W MNT3P40549 630 aa3.37□□□□□ -1.87
SEC22YLR268W SNO3P43544 222 aa3.37□□□□□ -1.87
SEC22YLR268W MDM12Q92328 271 aa3.37□□□□□ -1.87
SEC22YLR268W CDC9P04819 755 aa3.36□□□□□ -1.87
SEC22YLR268W RPL7AP05737 244 aaKnown RBP3.36□□□□□ -1.87
SEC22YLR268W KIN82P25341 720 aa3.36□□□□□ -1.87
SEC22YLR268W ELF1P36053 145 aa3.36□□□□□ -1.87
SEC22YLR268W AKL1P38080 1108 aaKnown RBP3.36□□□□□ -1.87
SEC22YLR268W SSZ1P38788 538 aaKnown RBP3.36□□□□□ -1.87
SEC22YLR268W BIT61P47041 543 aa3.36□□□□□ -1.87
SEC22YLR268W NNF1P47149 201 aa3.36□□□□□ -1.87
SEC22YLR268W SCW4P53334 386 aaKnown RBP3.36□□□□□ -1.87
SEC22YLR268W RPL7BQ12213 244 aaKnown RBP3.36□□□□□ -1.87
SEC22YLR268W SEC15P22224 910 aa3.35□□□□□ -1.87
SEC22YLR268W APD1P38281 316 aa3.35□□□□□ -1.87
SEC22YLR268W RIM4P38741 713 aa3.35□□□□□ -1.87
SEC22YLR268W CCT4P39078 528 aaKnown RBP3.35□□□□□ -1.87
SEC22YLR268W YJR039WP47107 1121 aa3.35□□□□□ -1.87
SEC22YLR268W NSE3Q05541 303 aa3.35□□□□□ -1.87
SEC22YLR268W ISA1Q07821 250 aaPredicted RBP3.35□□□□□ -1.87
SEC22YLR268W ZPS1Q12512 249 aa3.35□□□□□ -1.87
SEC22YLR268W PIH1P38768 344 aa3.34□□□□□ -1.87
SEC22YLR268W DOT6P40059 670 aaKnown RBP3.34□□□□□ -1.87
SEC22YLR268W THI6P41835 540 aa3.34□□□□□ -1.87
SEC22YLR268W LSC1P53598 329 aaKnown RBP3.34□□□□□ -1.87
SEC22YLR268W HEM1P09950 548 aaPredicted RBP3.33□□□□□ -1.88
SEC22YLR268W SRP40P32583 406 aaPredicted RBP3.33□□□□□ -1.88
SEC22YLR268W PET127P32606 800 aa3.33□□□□□ -1.88
SEC22YLR268W RPC34P32910 317 aa3.33□□□□□ -1.88
SEC22YLR268W MNN4P36044 1178 aa3.33□□□□□ -1.88
SEC22YLR268W JHD1P40034 492 aa3.33□□□□□ -1.88
SEC22YLR268W RSC9Q03124 581 aa3.33□□□□□ -1.88
SEC22YLR268W COG8Q04632 607 aa3.33□□□□□ -1.88
SEC22YLR268W PRS5Q12265 496 aaKnown RBP3.33□□□□□ -1.88
SEC22YLR268W YMR084WA2P2R3 262 aa3.32□□□□□ -1.88
SEC22YLR268W MRPL9P31334 269 aa3.32□□□□□ -1.88
SEC22YLR268W DSS1P39112 969 aa3.32□□□□□ -1.88
SEC22YLR268W GIS2P53849 153 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
SEC22YLR268W TRS23Q03784 219 aa3.32□□□□□ -1.88
SEC22YLR268W NUP53Q03790 475 aa3.32□□□□□ -1.88
SEC22YLR268W CPA2P03965 1118 aaKnown RBP3.31□□□□□ -1.88
SEC22YLR268W SRD1P09007 221 aa3.31□□□□□ -1.88
SEC22YLR268W FRS1P15624 595 aaKnown RBP3.31□□□□□ -1.88
SEC22YLR268W IDP3P53982 420 aaKnown RBP3.31□□□□□ -1.88
SEC22YLR268W GPD1Q00055 391 aaKnown RBP3.31□□□□□ -1.88
SEC22YLR268W VHS3Q08438 674 aa3.31□□□□□ -1.88
SEC22YLR268W RPS9BP05755 195 aaKnown RBP3.3□□□□□ -1.88
SEC22YLR268W AQY1P0CD91 305 aa3.3□□□□□ -1.88
SEC22YLR268W YHR202WP38887 602 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms