RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W NCS2P53923 493 aaPredicted RBP2.52□□□□□ -2.01
NUP100YKL068W MET7Q08645 548 aa2.52□□□□□ -2.01
NUP100YKL068W MCH5Q08777 521 aa2.52□□□□□ -2.01
NUP100YKL068W MET17P06106 444 aa2.52□□□□□ -2.01
NUP100YKL068W ILS1P09436 1072 aaKnown RBP2.52□□□□□ -2.01
NUP100YKL068W CAF20P12962 161 aaKnown RBP2.52□□□□□ -2.01
NUP100YKL068W MNE1P24720 663 aa2.52□□□□□ -2.01
NUP100YKL068W UGA3P26370 528 aa2.52□□□□□ -2.01
NUP100YKL068W APM3P38153 483 aa2.52□□□□□ -2.01
NUP100YKL068W NCL1P38205 684 aaKnown RBP2.52□□□□□ -2.01
NUP100YKL068W FAT1P38225 669 aa2.52□□□□□ -2.01
NUP100YKL068W EXO5P38289 585 aa2.52□□□□□ -2.01
NUP100YKL068W DLD3P39976 496 aaKnown RBP2.52□□□□□ -2.01
NUP100YKL068W AAD14P42884 376 aa2.52□□□□□ -2.01
NUP100YKL068W YNR040WP53736 256 aa2.52□□□□□ -2.01
NUP100YKL068W HOS3Q02959 697 aaKnown RBP2.52□□□□□ -2.01
NUP100YKL068W PRP42Q03776 544 aaKnown RBP2.52□□□□□ -2.01
NUP100YKL068W APL5Q08951 932 aaKnown RBP2.52□□□□□ -2.01
NUP100YKL068W TRM8Q12009 286 aa2.52□□□□□ -2.01
NUP100YKL068W NUC1P08466 329 aa2.51□□□□□ -2.01
NUP100YKL068W CDC16P09798 840 aa2.51□□□□□ -2.01
NUP100YKL068W SUI2P20459 304 aaKnown RBP2.51□□□□□ -2.01
NUP100YKL068W LAM1P38851 1228 aa2.51□□□□□ -2.01
NUP100YKL068W TIF4631P39935 952 aaKnown RBP2.51□□□□□ -2.01
NUP100YKL068W LTP1P40347 161 aa2.51□□□□□ -2.01
NUP100YKL068W RIC1P40395 1056 aa2.51□□□□□ -2.01
NUP100YKL068W YIL092WP40497 633 aa2.51□□□□□ -2.01
NUP100YKL068W MPH1P40562 993 aa2.51□□□□□ -2.01
NUP100YKL068W RMD8P43620 662 aa2.51□□□□□ -2.01
NUP100YKL068W MAD3P47074 515 aa2.51□□□□□ -2.01
NUP100YKL068W GUP1P53154 560 aa2.51□□□□□ -2.01
NUP100YKL068W YGR283CP53336 341 aaPredicted RBP2.51□□□□□ -2.01
NUP100YKL068W SEC5P89102 971 aa2.51□□□□□ -2.01
NUP100YKL068W HLR1Q04429 423 aa2.51□□□□□ -2.01
NUP100YKL068W VID22Q05934 901 aa2.51□□□□□ -2.01
NUP100YKL068W YCG1Q06680 1035 aa2.51□□□□□ -2.01
NUP100YKL068W NFI1Q12216 726 aa2.51□□□□□ -2.01
NUP100YKL068W LYS2P07702 1392 aa2.51□□□□□ -2.01
NUP100YKL068W RPC40P07703 335 aaKnown RBP2.51□□□□□ -2.01
NUP100YKL068W NCP1P16603 691 aaKnown RBP2.51□□□□□ -2.01
NUP100YKL068W AFT1P22149 690 aa2.51□□□□□ -2.01
NUP100YKL068W AMS1P22855 1083 aa2.51□□□□□ -2.01
NUP100YKL068W ADP1P25371 1049 aa2.51□□□□□ -2.01
NUP100YKL068W AFR1P33304 620 aa2.51□□□□□ -2.01
NUP100YKL068W NPR3P38742 1146 aa2.51□□□□□ -2.01
NUP100YKL068W EAF5P39995 279 aa2.51□□□□□ -2.01
NUP100YKL068W LSM5P40089 93 aaKnown RBP2.51□□□□□ -2.01
NUP100YKL068W ENT3P47160 408 aa2.51□□□□□ -2.01
NUP100YKL068W ARE2P53629 642 aaKnown RBP2.51□□□□□ -2.01
NUP100YKL068W SSL2Q00578 843 aa2.51□□□□□ -2.01
NUP100YKL068W MRPL13Q02204 264 aa2.51□□□□□ -2.01
NUP100YKL068W CUS1Q02554 436 aaPredicted RBP2.51□□□□□ -2.01
NUP100YKL068W LCD1Q04377 747 aa2.51□□□□□ -2.01
NUP100YKL068W REX3Q12090 404 aa2.51□□□□□ -2.01
NUP100YKL068W CFT2Q12102 859 aaPredicted RBP2.51□□□□□ -2.01
NUP100YKL068W ARP7Q12406 477 aa2.51□□□□□ -2.01
NUP100YKL068W GRX6Q12438 231 aa2.51□□□□□ -2.01
NUP100YKL068W PGA3Q12746 312 aaKnown RBP2.51□□□□□ -2.01
NUP100YKL068W TY1A-LR4P0C2I8 440 aaKnown RBP2.51□□□□□ -2.01
NUP100YKL068W TY1A-DR6P0CX70 440 aa2.51□□□□□ -2.01
NUP100YKL068W TY1A-ER1P0CX71 440 aa2.51□□□□□ -2.01
NUP100YKL068W TY1A-LR2P0CX72 440 aa2.51□□□□□ -2.01
NUP100YKL068W TY1A-PLP0CX73 440 aa2.51□□□□□ -2.01
NUP100YKL068W TY1A-JR1P0CX74 440 aa2.51□□□□□ -2.01
NUP100YKL068W TY1A-LR3P0CX75 440 aa2.51□□□□□ -2.01
NUP100YKL068W TY1A-ML2P0CX76 440 aa2.51□□□□□ -2.01
NUP100YKL068W PDX1P16451 410 aa2.51□□□□□ -2.01
NUP100YKL068W MIH1P23748 554 aa2.51□□□□□ -2.01
NUP100YKL068W PHO3P24031 467 aa2.51□□□□□ -2.01
NUP100YKL068W NPP1P25353 742 aa2.51□□□□□ -2.01
NUP100YKL068W IFA38P38286 347 aa2.51□□□□□ -2.01
NUP100YKL068W YBR225WP38321 900 aa2.51□□□□□ -2.01
NUP100YKL068W PPE1P38796 400 aa2.51□□□□□ -2.01
NUP100YKL068W YHR202WP38887 602 aa2.51□□□□□ -2.01
NUP100YKL068W VPS41P38959 992 aa2.51□□□□□ -2.01
NUP100YKL068W YTA6P40328 754 aa2.51□□□□□ -2.01
NUP100YKL068W PTA1Q01329 785 aaPredicted RBP2.51□□□□□ -2.01
NUP100YKL068W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
NUP100YKL068W NHX1Q04121 633 aa2.51□□□□□ -2.01
NUP100YKL068W SPP382Q06411 708 aaPredicted RBP2.51□□□□□ -2.01
NUP100YKL068W SWA2Q06677 668 aa2.51□□□□□ -2.01
NUP100YKL068W ADY3Q07732 790 aa2.51□□□□□ -2.01
NUP100YKL068W TY1A-GR1Q12085 440 aa2.51□□□□□ -2.01
NUP100YKL068W ISA2Q12425 185 aa2.51□□□□□ -2.01
NUP100YKL068W PAR32Q12515 295 aaKnown RBP2.51□□□□□ -2.01
NUP100YKL068W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.51□□□□□ -2.01
NUP100YKL068W TY1A-OLQ92392 440 aaKnown RBP2.51□□□□□ -2.01
NUP100YKL068W ADE8P04161 214 aa2.5□□□□□ -2.01
NUP100YKL068W CMP2P14747 604 aa2.5□□□□□ -2.01
NUP100YKL068W HOP1P20050 605 aa2.5□□□□□ -2.01
NUP100YKL068W MCM3P24279 971 aaKnown RBP2.5□□□□□ -2.01
NUP100YKL068W RAD51P25454 400 aa2.5□□□□□ -2.01
NUP100YKL068W CDC48P25694 835 aaKnown RBP2.5□□□□□ -2.01
NUP100YKL068W CCR4P31384 837 aaKnown RBP2.5□□□□□ -2.01
NUP100YKL068W CNS1P33313 385 aa2.5□□□□□ -2.01
NUP100YKL068W DEF1P35732 738 aaKnown RBP2.5□□□□□ -2.01
NUP100YKL068W SHU2P38957 223 aa2.5□□□□□ -2.01
NUP100YKL068W AIR1P40507 360 aaKnown RBP2.5□□□□□ -2.01
NUP100YKL068W LCB2P40970 561 aa2.5□□□□□ -2.01
NUP100YKL068W POL31P46957 487 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 784.7 ms