RNA–Protein interactions for RNA: YHR041C

SRB2, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SRB2, Length 633 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRB2	YHR041C	DDC1	Q08949	612 aa		13.89	□□□□□ -0.19
SRB2	YHR041C	CKI1	P20485	582 aa		13.88	□□□□□ -0.19
SRB2	YHR041C	AVT2	P39981	480 aa		13.88	□□□□□ -0.19
SRB2	YHR041C	SNZ3	P43545	298 aa		13.88	□□□□□ -0.19
SRB2	YHR041C	SNZ2	P53824	298 aa		13.88	□□□□□ -0.19
SRB2	YHR041C	EAR1	Q03212	550 aa		13.88	□□□□□ -0.19
SRB2	YHR041C	HER2	Q03557	464 aa		13.88	□□□□□ -0.19
SRB2	YHR041C	YMR114C	Q04471	368 aa	Known RBP	13.88	□□□□□ -0.19
SRB2	YHR041C	JIP3	O13555	125 aa		13.87	□□□□□ -0.19
SRB2	YHR041C	ATP1	P07251	545 aa	Known RBP	13.87	□□□□□ -0.19
SRB2	YHR041C	RAD27	P26793	382 aa		13.87	□□□□□ -0.19
SRB2	YHR041C	RCK2	P38623	610 aa		13.87	□□□□□ -0.19
SRB2	YHR041C	PRK1	P40494	810 aa		13.87	□□□□□ -0.19
SRB2	YHR041C	CDC1	P40986	491 aa		13.87	□□□□□ -0.19
SRB2	YHR041C	RAD10	P06838	210 aa		13.86	□□□□□ -0.19
SRB2	YHR041C	PGS1	P25578	521 aa		13.86	□□□□□ -0.19
SRB2	YHR041C	SRB2	P34162	210 aa		13.86	□□□□□ -0.19
SRB2	YHR041C	KDX1	P36005	433 aa		13.86	□□□□□ -0.19
SRB2	YHR041C	SHE3	P38272	425 aa	Known RBP	13.86	□□□□□ -0.19
SRB2	YHR041C	FHL1	P39521	936 aa		13.86	□□□□□ -0.19
SRB2	YHR041C	LCP5	P40079	357 aa	Predicted RBP	13.86	□□□□□ -0.19
SRB2	YHR041C	HOP2	P53187	214 aa		13.86	□□□□□ -0.19
SRB2	YHR041C	ADE3	P07245	946 aa	Known RBP	13.85	□□□□□ -0.19
SRB2	YHR041C	SPE1	P08432	466 aa		13.85	□□□□□ -0.19
SRB2	YHR041C	MAS1	P10507	462 aa		13.85	□□□□□ -0.19
SRB2	YHR041C	SRB4	P32569	687 aa		13.85	□□□□□ -0.19
SRB2	YHR041C	TGL3	P40308	642 aa		13.85	□□□□□ -0.19
SRB2	YHR041C	UFO1	Q04511	668 aa		13.85	□□□□□ -0.19
SRB2	YHR041C	HRD3	Q05787	833 aa		13.85	□□□□□ -0.19
SRB2	YHR041C	YRR1	Q12172	810 aa		13.85	□□□□□ -0.19
SRB2	YHR041C	YLR462W	O13556	202 aa		13.84	□□□□□ -0.19
SRB2	YHR041C	PUT4	P15380	627 aa		13.84	□□□□□ -0.19
SRB2	YHR041C	VPH1	P32563	840 aa	Known RBP	13.84	□□□□□ -0.19
SRB2	YHR041C	ABD1	P32783	436 aa	Predicted RBP	13.84	□□□□□ -0.19
SRB2	YHR041C	SEG2	P34250	1132 aa		13.84	□□□□□ -0.19
SRB2	YHR041C	YHL049C	P38722	271 aa		13.84	□□□□□ -0.19
SRB2	YHR041C	PSY2	P40164	858 aa		13.84	□□□□□ -0.19
SRB2	YHR041C	YFL064C	P43540	174 aa		13.84	□□□□□ -0.19
SRB2	YHR041C	JJJ1	P53863	590 aa		13.84	□□□□□ -0.19
SRB2	YHR041C	YNL144C	P53907	740 aa		13.84	□□□□□ -0.19
SRB2	YHR041C	AIM39	Q08223	395 aa		13.84	□□□□□ -0.19
SRB2	YHR041C	SDH5	Q08230	162 aa		13.84	□□□□□ -0.19
SRB2	YHR041C	NBP2	Q12163	236 aa		13.84	□□□□□ -0.19
SRB2	YHR041C	YBL111C	Q3E7Y5	667 aa		13.84	□□□□□ -0.19
SRB2	YHR041C	SEC1	P30619	724 aa	Known RBP	13.83	□□□□□ -0.2
SRB2	YHR041C	DBF4	P32325	704 aa		13.83	□□□□□ -0.2
SRB2	YHR041C	HSL7	P38274	827 aa		13.83	□□□□□ -0.2
SRB2	YHR041C	RAD55	P38953	406 aa		13.83	□□□□□ -0.2
SRB2	YHR041C	NOG2	P53742	486 aa	Known RBP	13.83	□□□□□ -0.2
SRB2	YHR041C	INA17	Q02888	182 aa		13.83	□□□□□ -0.2
SRB2	YHR041C	ATG16	Q03818	150 aa		13.83	□□□□□ -0.2
SRB2	YHR041C	POB3	Q04636	552 aa	Known RBP	13.83	□□□□□ -0.2
SRB2	YHR041C	SPO21	Q12411	609 aa		13.83	□□□□□ -0.2
SRB2	YHR041C	IDI1	P15496	288 aa		13.82	□□□□□ -0.2
SRB2	YHR041C	TRX1	P22217	103 aa	Known RBP	13.82	□□□□□ -0.2
SRB2	YHR041C	PDE1	P22434	369 aa		13.82	□□□□□ -0.2
SRB2	YHR041C	YBL055C	P34220	418 aa	Predicted RBP	13.82	□□□□□ -0.2
SRB2	YHR041C	YBR053C	P38235	358 aa		13.82	□□□□□ -0.2
SRB2	YHR041C	KHA1	P40309	873 aa		13.82	□□□□□ -0.2
SRB2	YHR041C	NDC80	P40460	691 aa		13.82	□□□□□ -0.2
SRB2	YHR041C	MKT1	P40850	830 aa	Known RBP	13.82	□□□□□ -0.2
SRB2	YHR041C	GUF1	P46943	645 aa		13.82	□□□□□ -0.2
SRB2	YHR041C	ALY2	P47029	1046 aa		13.82	□□□□□ -0.2
SRB2	YHR041C	RIM8	P53179	542 aa		13.82	□□□□□ -0.2
SRB2	YHR041C	ECM22	Q05958	814 aa	Predicted RBP	13.82	□□□□□ -0.2
SRB2	YHR041C	YLR257W	Q06146	321 aa	Known RBP	13.82	□□□□□ -0.2
SRB2	YHR041C	LCB4	Q12246	624 aa		13.82	□□□□□ -0.2
SRB2	YHR041C	HXT3	P32466	567 aa	Known RBP	13.81	□□□□□ -0.2
SRB2	YHR041C	REI1	P38344	393 aa	Predicted RBP	13.81	□□□□□ -0.2
SRB2	YHR041C	TAF1	P46677	1066 aa		13.81	□□□□□ -0.2
SRB2	YHR041C	YGR283C	P53336	341 aa	Predicted RBP	13.81	□□□□□ -0.2
SRB2	YHR041C	SPO71	Q03868	1245 aa		13.81	□□□□□ -0.2
SRB2	YHR041C	URH1	Q04179	340 aa		13.81	□□□□□ -0.2
SRB2	YHR041C	TAF9	Q05027	157 aa		13.81	□□□□□ -0.2
SRB2	YHR041C	POL3	P15436	1097 aa		13.8	□□□□□ -0.2
SRB2	YHR041C	DSS4	P32601	143 aa		13.8	□□□□□ -0.2
SRB2	YHR041C	TMA108	P40462	946 aa		13.8	□□□□□ -0.2
SRB2	YHR041C	YIL054W	P40524	105 aa		13.8	□□□□□ -0.2
SRB2	YHR041C	CWC22	P53333	577 aa	Known RBP	13.8	□□□□□ -0.2
SRB2	YHR041C	CEG1	Q01159	459 aa	Predicted RBP	13.8	□□□□□ -0.2
SRB2	YHR041C	GCN5	Q03330	439 aa		13.8	□□□□□ -0.2
SRB2	YHR041C	ESC2	Q06340	456 aa		13.8	□□□□□ -0.2
SRB2	YHR041C	TAF10	Q12030	206 aa		13.8	□□□□□ -0.2
SRB2	YHR041C	YKR051W	P36142	418 aa		13.79	□□□□□ -0.2
SRB2	YHR041C	BET4	Q00618	327 aa		13.79	□□□□□ -0.2
SRB2	YHR041C	IVY1	Q04934	453 aa		13.79	□□□□□ -0.2
SRB2	YHR041C	FMP25	Q08023	583 aa		13.79	□□□□□ -0.2
SRB2	YHR041C	CCH1	P50077	2039 aa		13.79	□□□□□ -0.2
SRB2	YHR041C	MET4	P32389	672 aa		13.78	□□□□□ -0.2
SRB2	YHR041C	AIM26	P32858	118 aa		13.78	□□□□□ -0.2
SRB2	YHR041C	SWC5	P38326	303 aa		13.78	□□□□□ -0.2
SRB2	YHR041C	YJL045W	P47052	634 aa		13.78	□□□□□ -0.2
SRB2	YHR041C	CDC55	Q00362	526 aa		13.78	□□□□□ -0.2
SRB2	YHR041C	RRB1	Q04225	511 aa	Known RBP	13.78	□□□□□ -0.2
SRB2	YHR041C	SPG3	Q04398	127 aa	Predicted RBP	13.78	□□□□□ -0.2
SRB2	YHR041C	TDA9	Q04545	1251 aa		13.78	□□□□□ -0.2
SRB2	YHR041C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	13.78	□□□□□ -0.2	not detected
SRB2	YHR041C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	13.77	□□□□□ -0.21	RIP-Chip
SRB2	YHR041C	KGD2	P19262	463 aa	Predicted RBP	13.77	□□□□□ -0.21
SRB2	YHR041C	AEP2	P22136	580 aa		13.77	□□□□□ -0.21

Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms