RNA–Protein interactions for RNA: YER017C

AFG3, Transcript of Mitochondrial inner membrane m-AAA protease component, yeast

Gene AFG3, Length 2,286 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AFG3	YER017C	ALA1	P40825	983 aa	Known RBP	7.54	□□□□□ -1.2
AFG3	YER017C	ALY2	P47029	1046 aa		7.54	□□□□□ -1.2
AFG3	YER017C	SXM1	Q04175	944 aa	Known RBP	7.54	□□□□□ -1.2
AFG3	YER017C	PRM6	Q04705	352 aa		7.54	□□□□□ -1.2
AFG3	YER017C	TAF10	Q12030	206 aa		7.54	□□□□□ -1.2
AFG3	YER017C	CDC24	P11433	854 aa	Predicted RBP	7.53	□□□□□ -1.2
AFG3	YER017C	PDR1	P12383	1068 aa		7.53	□□□□□ -1.2
AFG3	YER017C	MRPL25	P23369	157 aa		7.53	□□□□□ -1.2
AFG3	YER017C	SEC1	P30619	724 aa	Known RBP	7.53	□□□□□ -1.2
AFG3	YER017C	PAM1	P37304	830 aa	Known RBP	7.53	□□□□□ -1.2
AFG3	YER017C	RPT2	P40327	437 aa	Known RBP	7.53	□□□□□ -1.2
AFG3	YER017C	ASG7	P46993	209 aa		7.53	□□□□□ -1.2
AFG3	YER017C	PEX21	P50091	288 aa		7.53	□□□□□ -1.2
AFG3	YER017C	MND1	P53102	219 aa		7.53	□□□□□ -1.2
AFG3	YER017C	PUS1	Q12211	544 aa	Known RBP	7.53	□□□□□ -1.2
AFG3	YER017C	SPT5	P27692	1063 aa	Known RBP	7.53	□□□□□ -1.2
AFG3	YER017C	BCS1	P32839	456 aa		7.53	□□□□□ -1.2
AFG3	YER017C	MRP4	P32902	394 aa		7.53	□□□□□ -1.2
AFG3	YER017C	APE3	P37302	537 aa	Known RBP	7.53	□□□□□ -1.2
AFG3	YER017C	FLC2	P39719	783 aa		7.53	□□□□□ -1.2
AFG3	YER017C	GEM1	P39722	662 aa		7.53	□□□□□ -1.2
AFG3	YER017C	SAW1	P39735	261 aa		7.53	□□□□□ -1.2
AFG3	YER017C	ARG2	P40360	574 aa		7.53	□□□□□ -1.2
AFG3	YER017C	YJL045W	P47052	634 aa		7.53	□□□□□ -1.2
AFG3	YER017C	ELP3	Q02908	557 aa	Known RBP	7.53	□□□□□ -1.2
AFG3	YER017C	MSC2	Q03455	724 aa		7.53	□□□□□ -1.2
AFG3	YER017C	THI7	Q05998	598 aa		7.53	□□□□□ -1.2
AFG3	YER017C	KAP95	Q06142	861 aa	Known RBP	7.53	□□□□□ -1.2
AFG3	YER017C	CDD1	Q06549	142 aa		7.53	□□□□□ -1.2
AFG3	YER017C	MET7	Q08645	548 aa		7.53	□□□□□ -1.2
AFG3	YER017C	FAP7	Q12055	197 aa	Predicted RBP	7.53	□□□□□ -1.2
AFG3	YER017C	YPR027C	Q12079	277 aa		7.53	□□□□□ -1.2
AFG3	YER017C	YRR1	Q12172	810 aa		7.53	□□□□□ -1.2
AFG3	YER017C	ATG11	Q12527	1178 aa		7.53	□□□□□ -1.2
AFG3	YER017C	ADE4	P04046	510 aa	Known RBP	7.52	□□□□□ -1.21
AFG3	YER017C	SSA4	P22202	642 aa	Known RBP	7.52	□□□□□ -1.21
AFG3	YER017C	SLY1	P22213	666 aa		7.52	□□□□□ -1.21
AFG3	YER017C	ARG1	P22768	420 aa		7.52	□□□□□ -1.21
AFG3	YER017C	TIM23	P32897	222 aa		7.52	□□□□□ -1.21
AFG3	YER017C	YBL036C	P38197	257 aa		7.52	□□□□□ -1.21
AFG3	YER017C	SWC5	P38326	303 aa		7.52	□□□□□ -1.21
AFG3	YER017C	TMA108	P40462	946 aa		7.52	□□□□□ -1.21
AFG3	YER017C	TDA10	P42938	290 aa		7.52	□□□□□ -1.21
AFG3	YER017C	YNL040W	P53960	456 aa	Predicted RBP	7.52	□□□□□ -1.21
AFG3	YER017C	SNU56	Q03782	492 aa	Known RBP	7.52	□□□□□ -1.21
AFG3	YER017C	ARO80	Q04052	950 aa		7.52	□□□□□ -1.21
AFG3	YER017C	CDC73	Q06697	393 aa		7.52	□□□□□ -1.21
AFG3	YER017C	VBA3	P25594	458 aa		7.52	□□□□□ -1.21
AFG3	YER017C	MEI4	P29467	408 aa		7.52	□□□□□ -1.21
AFG3	YER017C	HEL1	P36113	551 aa		7.52	□□□□□ -1.21
AFG3	YER017C	VBA5	P36172	582 aa		7.52	□□□□□ -1.21
AFG3	YER017C	NOP4	P37838	685 aa	Known RBP	7.52	□□□□□ -1.21
AFG3	YER017C	AIM39	Q08223	395 aa		7.52	□□□□□ -1.21
AFG3	YER017C	PMR1	P13586	950 aa		7.51	□□□□□ -1.21
AFG3	YER017C	KAR4	P25583	335 aa		7.51	□□□□□ -1.21
AFG3	YER017C	MSS51	P32335	436 aa		7.51	□□□□□ -1.21
AFG3	YER017C	YHR054C	P38780	354 aa		7.51	□□□□□ -1.21
AFG3	YER017C	RSC30	P38781	883 aa		7.51	□□□□□ -1.21
AFG3	YER017C	MXR1	P40029	184 aa		7.51	□□□□□ -1.21
AFG3	YER017C	YIL054W	P40524	105 aa		7.51	□□□□□ -1.21
AFG3	YER017C	HLJ1	P48353	224 aa		7.51	□□□□□ -1.21
AFG3	YER017C	ALG11	P53954	548 aa	Known RBP	7.51	□□□□□ -1.21
AFG3	YER017C	CST9	Q06032	482 aa		7.51	□□□□□ -1.21
AFG3	YER017C	NOB1	Q08444	459 aa	Known RBP	7.51	□□□□□ -1.21
AFG3	YER017C	PCD1	Q12524	340 aa		7.51	□□□□□ -1.21
AFG3	YER017C	CHS1	P08004	1131 aa		7.5	□□□□□ -1.21
AFG3	YER017C	GLN3	P18494	730 aa		7.5	□□□□□ -1.21
AFG3	YER017C	GPT2	P36148	743 aa		7.5	□□□□□ -1.21
AFG3	YER017C	YMC2	P38087	329 aa		7.5	□□□□□ -1.21
AFG3	YER017C	AGP2	P38090	596 aa		7.5	□□□□□ -1.21
AFG3	YER017C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	7.5	□□□□□ -1.21	not detected
AFG3	YER017C	CDC55	Q00362	526 aa		7.5	□□□□□ -1.21
AFG3	YER017C	MZM1	Q03429	123 aa	Predicted RBP	7.5	□□□□□ -1.21
AFG3	YER017C	CMS1	Q07897	291 aa	Known RBP	7.5	□□□□□ -1.21
AFG3	YER017C	VHS3	Q08438	674 aa		7.5	□□□□□ -1.21
AFG3	YER017C	TRE1	Q08919	783 aa		7.5	□□□□□ -1.21
AFG3	YER017C	PUT4	P15380	627 aa		7.5	□□□□□ -1.21
AFG3	YER017C	PRP4	P20053	465 aa	Known RBP	7.5	□□□□□ -1.21
AFG3	YER017C	BAS1	P22035	811 aa		7.5	□□□□□ -1.21
AFG3	YER017C	TBS1	P38114	1094 aa		7.5	□□□□□ -1.21
AFG3	YER017C	MSR1	P38714	643 aa		7.5	□□□□□ -1.21
AFG3	YER017C	SPC97	P38863	823 aa		7.5	□□□□□ -1.21
AFG3	YER017C	YJR054W	P47114	497 aa		7.5	□□□□□ -1.21
AFG3	YER017C	KTR5	P53966	522 aa	Predicted RBP	7.5	□□□□□ -1.21
AFG3	YER017C	UBX4	P54730	416 aa		7.5	□□□□□ -1.21
AFG3	YER017C	DOT1	Q04089	582 aa	Known RBP	7.5	□□□□□ -1.21
AFG3	YER017C	SAT4	P25333	603 aa	Known RBP	7.49	□□□□□ -1.21
AFG3	YER017C	PDB1	P32473	366 aa	Known RBP	7.49	□□□□□ -1.21
AFG3	YER017C	SRB2	P34162	210 aa		7.49	□□□□□ -1.21
AFG3	YER017C	SMF2	P38778	549 aa		7.49	□□□□□ -1.21
AFG3	YER017C	YML119W	Q03208	357 aa		7.49	□□□□□ -1.21
AFG3	YER017C	VPS54	Q12071	889 aa		7.49	□□□□□ -1.21
AFG3	YER017C	RIB2	Q12362	591 aa	Known RBP	7.49	□□□□□ -1.21
AFG3	YER017C	DBP1	P24784	617 aa	Known RBP	7.49	□□□□□ -1.21
AFG3	YER017C	APN2	P38207	520 aa		7.49	□□□□□ -1.21
AFG3	YER017C	YBR032W	P38223	100 aa		7.49	□□□□□ -1.21
AFG3	YER017C	AVT2	P39981	480 aa		7.49	□□□□□ -1.21
AFG3	YER017C	YER186C	P40101	306 aa		7.49	□□□□□ -1.21
AFG3	YER017C	TFG1	P41895	735 aa	Predicted RBP	7.49	□□□□□ -1.21
AFG3	YER017C	SKP2	P42843	763 aa		7.49	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms