RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	CSE1	P33307	960 aa		13.46	□□□□□ -0.25
NPL3	YDR432W	MND1	P53102	219 aa		13.46	□□□□□ -0.25
NPL3	YDR432W	YGL036W	P53185	909 aa	Predicted RBP	13.46	□□□□□ -0.25
NPL3	YDR432W	DRN1	P53255	507 aa	Known RBP	13.46	□□□□□ -0.25
NPL3	YDR432W	TRE1	Q08919	783 aa		13.46	□□□□□ -0.25
NPL3	YDR432W	RPL40A	P0CH08	128 aa	Known RBP	13.45	□□□□□ -0.26
NPL3	YDR432W	RPL40B	P0CH09	128 aa	Known RBP	13.45	□□□□□ -0.26
NPL3	YDR432W	SPT5	P27692	1063 aa	Known RBP	13.45	□□□□□ -0.26
NPL3	YDR432W	XRS2	P33301	854 aa		13.45	□□□□□ -0.26
NPL3	YDR432W	HSP78	P33416	811 aa		13.45	□□□□□ -0.26
NPL3	YDR432W	EBS1	Q03466	884 aa	Known RBP	13.45	□□□□□ -0.26
NPL3	YDR432W	YCG1	Q06680	1035 aa		13.45	□□□□□ -0.26
NPL3	YDR432W	REV1	P12689	985 aa		13.44	□□□□□ -0.26
NPL3	YDR432W	KIN3	P22209	435 aa		13.44	□□□□□ -0.26
NPL3	YDR432W	CDC11	P32458	415 aa		13.44	□□□□□ -0.26
NPL3	YDR432W	PSY4	P38193	441 aa		13.44	□□□□□ -0.26
NPL3	YDR432W	SSP1	P38871	571 aa		13.44	□□□□□ -0.26
NPL3	YDR432W	CDC1	P40986	491 aa		13.44	□□□□□ -0.26
NPL3	YDR432W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	13.44	□□□□□ -0.26	not detected
NPL3	YDR432W	GFD1	Q04839	188 aa	Known RBP	13.44	□□□□□ -0.26
NPL3	YDR432W	RCL1	Q08096	367 aa	Predicted RBP	13.44	□□□□□ -0.26
NPL3	YDR432W	LPX1	Q12405	387 aa	Known RBP	13.44	□□□□□ -0.26
NPL3	YDR432W	NUM1	Q00402	2748 aa		13.43	□□□□□ -0.26
NPL3	YDR432W	CSG2	P35206	410 aa		13.43	□□□□□ -0.26
NPL3	YDR432W	RMD8	P43620	662 aa		13.43	□□□□□ -0.26
NPL3	YDR432W	CWC24	P53769	259 aa		13.43	□□□□□ -0.26
NPL3	YDR432W	FPR1	P20081	114 aa	Known RBP	13.42	□□□□□ -0.26
NPL3	YDR432W	MRC1	P25588	1096 aa		13.42	□□□□□ -0.26
NPL3	YDR432W	PSE1	P32337	1089 aa	Known RBP	13.42	□□□□□ -0.26
NPL3	YDR432W	ADE17	P38009	592 aa	Known RBP	13.42	□□□□□ -0.26
NPL3	YDR432W	ECM13	P38195	257 aa		13.42	□□□□□ -0.26
NPL3	YDR432W	PFD1	P46988	109 aa		13.42	□□□□□ -0.26
NPL3	YDR432W	NMA2	P53204	395 aa		13.42	□□□□□ -0.26
NPL3	YDR432W	YNL035C	P53962	389 aa	Known RBP	13.42	□□□□□ -0.26
NPL3	YDR432W	YPL014W	Q02606	381 aa		13.42	□□□□□ -0.26
NPL3	YDR432W	HRD3	Q05787	833 aa		13.42	□□□□□ -0.26
NPL3	YDR432W	TMA16	Q08687	178 aa		13.42	□□□□□ -0.26
NPL3	YDR432W	JIP3	O13555	125 aa		13.41	□□□□□ -0.26
NPL3	YDR432W	CDC37	P06101	506 aa	Known RBP	13.41	□□□□□ -0.26
NPL3	YDR432W	DAL2	P25335	343 aa		13.41	□□□□□ -0.26
NPL3	YDR432W	DYS1	P38791	387 aa		13.41	□□□□□ -0.26
NPL3	YDR432W	VTC4	P47075	721 aa		13.41	□□□□□ -0.26
NPL3	YDR432W	YPL062W	Q02781	134 aa		13.41	□□□□□ -0.26
NPL3	YDR432W	SPO75	Q07798	868 aa		13.41	□□□□□ -0.26
NPL3	YDR432W	YER152C	P10356	443 aa		13.4	□□□□□ -0.26
NPL3	YDR432W	CLC1	P17891	233 aa		13.4	□□□□□ -0.26
NPL3	YDR432W	HFM1	P51979	1187 aa		13.4	□□□□□ -0.26
NPL3	YDR432W	YNR065C	P53751	1116 aa		13.4	□□□□□ -0.26
NPL3	YDR432W	VPS54	Q12071	889 aa		13.4	□□□□□ -0.26
NPL3	YDR432W	PPR1	P07272	904 aa	Predicted RBP	13.39	□□□□□ -0.27
NPL3	YDR432W	YET1	P35723	206 aa		13.39	□□□□□ -0.27
NPL3	YDR432W	UFE1	P41834	346 aa		13.39	□□□□□ -0.27
NPL3	YDR432W	GPD1	Q00055	391 aa	Known RBP	13.39	□□□□□ -0.27
NPL3	YDR432W	ARO80	Q04052	950 aa		13.39	□□□□□ -0.27
NPL3	YDR432W	MDM38	Q08179	573 aa		13.39	□□□□□ -0.27
NPL3	YDR432W	MRPL10	P36520	322 aa		13.38	□□□□□ -0.27
NPL3	YDR432W	SDS3	P40505	327 aa		13.38	□□□□□ -0.27
NPL3	YDR432W	ERG10	P41338	398 aa	Known RBP	13.38	□□□□□ -0.27
NPL3	YDR432W	ESBP6	P53918	673 aa		13.38	□□□□□ -0.27
NPL3	YDR432W	LCB4	Q12246	624 aa		13.38	□□□□□ -0.27
NPL3	YDR432W	ENO2	P00925	437 aa	Known RBP	13.37	□□□□□ -0.27
NPL3	YDR432W	AEP2	P22136	580 aa		13.37	□□□□□ -0.27
NPL3	YDR432W	STE5	P32917	917 aa		13.37	□□□□□ -0.27
NPL3	YDR432W	SGE1	P33335	543 aa		13.37	□□□□□ -0.27
NPL3	YDR432W	RPC25	P35718	212 aa		13.37	□□□□□ -0.27
NPL3	YDR432W	HEM14	P40012	539 aa		13.37	□□□□□ -0.27
NPL3	YDR432W	OSW5	P40219	148 aa		13.37	□□□□□ -0.27
NPL3	YDR432W	TAF9	Q05027	157 aa		13.37	□□□□□ -0.27
NPL3	YDR432W	RPS3	P05750	240 aa	Known RBP	13.36	□□□□□ -0.27
NPL3	YDR432W	YBR053C	P38235	358 aa		13.36	□□□□□ -0.27
NPL3	YDR432W	COQ6	P53318	479 aa		13.36	□□□□□ -0.27
NPL3	YDR432W	RTN1	Q04947	295 aa	Known RBP	13.36	□□□□□ -0.27
NPL3	YDR432W	PMT7	Q06644	662 aa		13.36	□□□□□ -0.27
NPL3	YDR432W	DIS3	Q08162	1001 aa	Known RBP	13.36	□□□□□ -0.27
NPL3	YDR432W	CDC33	P07260	213 aa	Known RBP	13.35	□□□□□ -0.27
NPL3	YDR432W	ABZ1	P37254	787 aa	Predicted RBP	13.35	□□□□□ -0.27
NPL3	YDR432W	RPT2	P40327	437 aa	Known RBP	13.35	□□□□□ -0.27
NPL3	YDR432W	YIR007W	P40566	764 aa		13.35	□□□□□ -0.27
NPL3	YDR432W	HOP2	P53187	214 aa		13.35	□□□□□ -0.27
NPL3	YDR432W	ECM38	Q05902	660 aa	Predicted RBP	13.35	□□□□□ -0.27
NPL3	YDR432W	YOR387C	Q08910	206 aa		13.35	□□□□□ -0.27
NPL3	YDR432W	CCP1	P00431	361 aa		13.34	□□□□□ -0.27
NPL3	YDR432W	GIP1	P38229	639 aa		13.34	□□□□□ -0.27
NPL3	YDR432W	ASG7	P46993	209 aa		13.34	□□□□□ -0.27
NPL3	YDR432W	PIR3	Q03180	325 aa		13.34	□□□□□ -0.27
NPL3	YDR432W	SPG3	Q04398	127 aa	Predicted RBP	13.34	□□□□□ -0.27
NPL3	YDR432W	YML082W	Q04533	649 aa	Known RBP	13.34	□□□□□ -0.27
NPL3	YDR432W	HPF1	Q05164	967 aa		13.34	□□□□□ -0.27
NPL3	YDR432W	SVS1	Q12254	260 aa		13.34	□□□□□ -0.27
NPL3	YDR432W	MRP4	P32902	394 aa		13.33	□□□□□ -0.28
NPL3	YDR432W	SPT8	P38915	602 aa		13.33	□□□□□ -0.28
NPL3	YDR432W	PCF11	P39081	626 aa	Predicted RBP	13.33	□□□□□ -0.28
NPL3	YDR432W	GDH3	P39708	457 aa		13.33	□□□□□ -0.28
NPL3	YDR432W	PHO86	P46956	311 aa		13.33	□□□□□ -0.28
NPL3	YDR432W	ACC1	Q00955	2233 aa	Known RBP	13.32	□□□□□ -0.28
NPL3	YDR432W	TCD2	P36101	447 aa	Known RBP	13.32	□□□□□ -0.28
NPL3	YDR432W	DUN1	P39009	513 aa		13.32	□□□□□ -0.28
NPL3	YDR432W	PSY2	P40164	858 aa		13.32	□□□□□ -0.28
NPL3	YDR432W	NUP84	P52891	726 aa		13.32	□□□□□ -0.28
NPL3	YDR432W	COP1	P53622	1201 aa	Known RBP	13.32	□□□□□ -0.28

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms