RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	VAM6	Q07468	1049 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	GET4	Q12125	312 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	BUG1	Q12191	341 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	TIP41	Q12199	356 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	WHI5	Q12416	295 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	CEX1	Q12453	761 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	YPT6	Q99260	215 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	YPR089W	O13585	888 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	ILV2	P07342	687 aa	Known RBP	5.23	□□□□□ -1.57
PAL1	YDR348C	OSM1	P21375	501 aa	Known RBP	5.23	□□□□□ -1.57
PAL1	YDR348C	YEL1	P34225	687 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	YKR078W	P36158	585 aa	Known RBP	5.23	□□□□□ -1.57
PAL1	YDR348C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.23	□□□□□ -1.57	not detected
PAL1	YDR348C	TIF5	P38431	405 aa	Known RBP	5.23	□□□□□ -1.57
PAL1	YDR348C	PEX18	P38855	283 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	CSM2	P40465	213 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	QDR2	P40474	542 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	IRR1	P40541	1150 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	YGR153W	P48238	217 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	RFX1	P48743	811 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	SUT1	P53032	299 aa	Known RBP	5.23	□□□□□ -1.57
PAL1	YDR348C	ZIP2	P53061	704 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	USE1	P53146	245 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	YGR021W	P53212	290 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	UBX4	P54730	416 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	PTA1	Q01329	785 aa	Predicted RBP	5.23	□□□□□ -1.57
PAL1	YDR348C	YMR187C	Q03236	431 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	ACL4	Q03771	387 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	UTP4	Q06679	776 aa	Known RBP	5.23	□□□□□ -1.57
PAL1	YDR348C	YPR078C	Q06813	372 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	MSC6	Q08818	692 aa	Known RBP	5.23	□□□□□ -1.57
PAL1	YDR348C	TAF3	Q12297	353 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	HIF1	Q12373	385 aa		5.23	□□□□□ -1.57
PAL1	YDR348C	SEM1	O94742	89 aa		5.22	□□□□□ -1.57
PAL1	YDR348C	TUF1	P02992	437 aa	Known RBP	5.22	□□□□□ -1.57
PAL1	YDR348C	SWI6	P09959	803 aa		5.22	□□□□□ -1.57
PAL1	YDR348C	URA4	P20051	364 aa		5.22	□□□□□ -1.57
PAL1	YDR348C	RME1	P32338	300 aa	Known RBP	5.22	□□□□□ -1.57
PAL1	YDR348C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.22	□□□□□ -1.57	RIP-Chip
PAL1	YDR348C	HES1	P35843	434 aa		5.22	□□□□□ -1.57
PAL1	YDR348C	MAL31	P38156	614 aa		5.22	□□□□□ -1.57
PAL1	YDR348C	PET100	P38958	111 aa		5.22	□□□□□ -1.57
PAL1	YDR348C	LCP5	P40079	357 aa	Predicted RBP	5.22	□□□□□ -1.57
PAL1	YDR348C	YIR007W	P40566	764 aa		5.22	□□□□□ -1.57
PAL1	YDR348C	TOS3	P43637	560 aa		5.22	□□□□□ -1.57
PAL1	YDR348C	STB2	P46679	850 aa		5.22	□□□□□ -1.57
PAL1	YDR348C	TAF6	P53040	516 aa		5.22	□□□□□ -1.57
PAL1	YDR348C	YGR016W	P53209	190 aa		5.22	□□□□□ -1.57
PAL1	YDR348C	SDA1	P53313	767 aa	Known RBP	5.22	□□□□□ -1.57
PAL1	YDR348C	NAM8	Q00539	523 aa	Known RBP	5.22	□□□□□ -1.57
PAL1	YDR348C	RPS15	Q01855	142 aa	Known RBP	5.22	□□□□□ -1.57
PAL1	YDR348C	NOP12	Q08208	459 aa	Known RBP	5.22	□□□□□ -1.57
PAL1	YDR348C	SSP2	Q08646	371 aa		5.22	□□□□□ -1.57
PAL1	YDR348C	GPR1	Q12361	961 aa		5.22	□□□□□ -1.57
PAL1	YDR348C	MDM20	Q12387	796 aa	Known RBP	5.22	□□□□□ -1.57
PAL1	YDR348C	LEU1	P07264	779 aa	Known RBP	5.21	□□□□□ -1.58
PAL1	YDR348C	MPH2	P0CD99	609 aa		5.21	□□□□□ -1.58
PAL1	YDR348C	SEC63	P14906	663 aa		5.21	□□□□□ -1.58
PAL1	YDR348C	VMA2	P16140	517 aa	Known RBP	5.21	□□□□□ -1.58
PAL1	YDR348C	THR1	P17423	357 aa	Known RBP	5.21	□□□□□ -1.58
PAL1	YDR348C	PRP5	P21372	849 aa	Predicted RBP	5.21	□□□□□ -1.58
PAL1	YDR348C	RNR3	P21672	869 aa	Known RBP	5.21	□□□□□ -1.58
PAL1	YDR348C	CNA1	P23287	553 aa		5.21	□□□□□ -1.58
PAL1	YDR348C	CLB2	P24869	491 aa		5.21	□□□□□ -1.58
PAL1	YDR348C	BUD23	P25627	275 aa	Predicted RBP	5.21	□□□□□ -1.58
PAL1	YDR348C	FRD1	P32614	470 aa	Known RBP	5.21	□□□□□ -1.58
PAL1	YDR348C	ANP1	P32629	500 aa		5.21	□□□□□ -1.58
PAL1	YDR348C	YKL050C	P35736	922 aa		5.21	□□□□□ -1.58
PAL1	YDR348C	PET10	P36139	283 aa		5.21	□□□□□ -1.58
PAL1	YDR348C	PPS1	P38148	807 aa		5.21	□□□□□ -1.58
PAL1	YDR348C	SPL2	P38839	148 aa		5.21	□□□□□ -1.58
PAL1	YDR348C	SHC1	P39000	512 aa		5.21	□□□□□ -1.58
PAL1	YDR348C	PCF11	P39081	626 aa	Predicted RBP	5.21	□□□□□ -1.58
PAL1	YDR348C	NPT1	P39683	429 aa	Known RBP	5.21	□□□□□ -1.58
PAL1	YDR348C	YIR042C	P40586	236 aa		5.21	□□□□□ -1.58
PAL1	YDR348C	YGL138C	P53122	345 aa		5.21	□□□□□ -1.58
PAL1	YDR348C	CIK1	Q01649	594 aa		5.21	□□□□□ -1.58
PAL1	YDR348C	SHR3	Q02774	210 aa		5.21	□□□□□ -1.58
PAL1	YDR348C	HMO1	Q03973	246 aa	Known RBP	5.21	□□□□□ -1.58
PAL1	YDR348C	YDR278C	Q05612	105 aa		5.21	□□□□□ -1.58
PAL1	YDR348C	TDA5	Q06417	326 aa	Known RBP	5.21	□□□□□ -1.58
PAL1	YDR348C	GPI13	Q07830	1017 aa		5.21	□□□□□ -1.58
PAL1	YDR348C	RPN8	Q08723	338 aa	Known RBP	5.21	□□□□□ -1.58
PAL1	YDR348C	BUD7	Q08754	746 aa		5.21	□□□□□ -1.58
PAL1	YDR348C	CDC53	Q12018	815 aa	Known RBP	5.21	□□□□□ -1.58
PAL1	YDR348C	MNL2	Q12205	849 aa		5.21	□□□□□ -1.58
PAL1	YDR348C	YLR462W	O13556	202 aa		5.2	□□□□□ -1.58
PAL1	YDR348C	PEP5	P12868	1029 aa		5.2	□□□□□ -1.58
PAL1	YDR348C	SPO16	P17122	198 aa		5.2	□□□□□ -1.58
PAL1	YDR348C	UTP11	P34247	250 aa	Predicted RBP	5.2	□□□□□ -1.58
PAL1	YDR348C	UBP13	P38187	747 aa		5.2	□□□□□ -1.58
PAL1	YDR348C	MMS21	P38632	267 aa		5.2	□□□□□ -1.58
PAL1	YDR348C	YHL049C	P38722	271 aa		5.2	□□□□□ -1.58
PAL1	YDR348C	OSH7	P38755	437 aa		5.2	□□□□□ -1.58
PAL1	YDR348C	SAK1	P38990	1142 aa		5.2	□□□□□ -1.58
PAL1	YDR348C	STT3	P39007	718 aa	Known RBP	5.2	□□□□□ -1.58
PAL1	YDR348C	OAF1	P39720	1047 aa	Predicted RBP	5.2	□□□□□ -1.58
PAL1	YDR348C	YEL075C	P39972	122 aa		5.2	□□□□□ -1.58
PAL1	YDR348C	YER189W	P40104	122 aa		5.2	□□□□□ -1.58
PAL1	YDR348C	DPH1	P40487	425 aa	Known RBP	5.2	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms