RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C BNA2P47125 453 aa5.1□□□□□ -1.59
SPR28YDR218C OCA1P50946 238 aaPredicted RBP5.1□□□□□ -1.59
SPR28YDR218C DAM1P53267 343 aa5.1□□□□□ -1.59
SPR28YDR218C FCP1Q03254 732 aa5.1□□□□□ -1.59
SPR28YDR218C TDA9Q04545 1251 aa5.1□□□□□ -1.59
SPR28YDR218C EIS1Q05050 843 aaKnown RBP5.1□□□□□ -1.59
SPR28YDR218C GUP2Q08929 609 aa5.1□□□□□ -1.59
SPR28YDR218C XRS2P33301 854 aa5.09□□□□□ -1.59
SPR28YDR218C DEF1P35732 738 aaKnown RBP5.09□□□□□ -1.59
SPR28YDR218C YRO2P38079 344 aa5.09□□□□□ -1.59
SPR28YDR218C YBR238CP38330 731 aaKnown RBP5.09□□□□□ -1.59
SPR28YDR218C RPN10P38886 268 aaKnown RBP5.09□□□□□ -1.59
SPR28YDR218C MSS4P38994 779 aa5.09□□□□□ -1.59
SPR28YDR218C CCT3P39077 534 aaKnown RBP5.09□□□□□ -1.59
SPR28YDR218C NIT3P49954 291 aa5.09□□□□□ -1.59
SPR28YDR218C TEP1P53916 434 aa5.09□□□□□ -1.59
SPR28YDR218C YKU80Q04437 629 aa5.09□□□□□ -1.59
SPR28YDR218C ATG33Q06485 197 aa5.09□□□□□ -1.59
SPR28YDR218C RSC3Q06639 885 aa5.09□□□□□ -1.59
SPR28YDR218C HIS5P07172 385 aa5.08□□□□□ -1.6
SPR28YDR218C NAT1P12945 854 aaKnown RBP5.08□□□□□ -1.6
SPR28YDR218C SPO16P17122 198 aa5.08□□□□□ -1.6
SPR28YDR218C DHR2P36009 735 aaPredicted RBP5.08□□□□□ -1.6
SPR28YDR218C MCD4P36051 919 aa5.08□□□□□ -1.6
SPR28YDR218C POA1P38218 177 aa5.08□□□□□ -1.6
SPR28YDR218C YEL068CP39977 110 aa5.08□□□□□ -1.6
SPR28YDR218C NPP2P39997 493 aa5.08□□□□□ -1.6
SPR28YDR218C YIL166CP40445 542 aa5.08□□□□□ -1.6
SPR28YDR218C VHR1P40522 640 aa5.08□□□□□ -1.6
SPR28YDR218C ASK10P48361 1146 aa5.08□□□□□ -1.6
SPR28YDR218C RNR4P49723 345 aaKnown RBP5.08□□□□□ -1.6
SPR28YDR218C SAP4P53036 818 aa5.08□□□□□ -1.6
SPR28YDR218C AIM14P53109 570 aa5.08□□□□□ -1.6
SPR28YDR218C PCL10P53124 433 aa5.08□□□□□ -1.6
SPR28YDR218C SFB2P53953 876 aa5.08□□□□□ -1.6
SPR28YDR218C YDR514CQ04408 483 aa5.08□□□□□ -1.6
SPR28YDR218C YDR286CQ05530 114 aa5.08□□□□□ -1.6
SPR28YDR218C CDA1Q06702 301 aa5.08□□□□□ -1.6
SPR28YDR218C SFI1Q12369 946 aa5.08□□□□□ -1.6
SPR28YDR218C NOP58Q12499 511 aaKnown RBP5.08□□□□□ -1.6
SPR28YDR218C AAC3P18238 307 aa5.07□□□□□ -1.6
SPR28YDR218C DAL7P21826 554 aa5.07□□□□□ -1.6
SPR28YDR218C NPP1P25353 742 aa5.07□□□□□ -1.6
SPR28YDR218C CDC48P25694 835 aaKnown RBP5.07□□□□□ -1.6
SPR28YDR218C REC104P33323 182 aa5.07□□□□□ -1.6
SPR28YDR218C MUD2P36084 527 aaKnown RBP5.07□□□□□ -1.6
SPR28YDR218C LRP1P38801 184 aaKnown RBP5.07□□□□□ -1.6
SPR28YDR218C CCT5P40413 562 aaKnown RBP5.07□□□□□ -1.6
SPR28YDR218C CIR1P42940 261 aa5.07□□□□□ -1.6
SPR28YDR218C CHA4P43634 648 aa5.07□□□□□ -1.6
SPR28YDR218C EXG2P52911 562 aa5.07□□□□□ -1.6
SPR28YDR218C ECM9Q02202 377 aa5.07□□□□□ -1.6
SPR28YDR218C YHM2Q04013 314 aa5.07□□□□□ -1.6
SPR28YDR218C YMR111CQ04461 462 aaPredicted RBP5.07□□□□□ -1.6
SPR28YDR218C ECM38Q05902 660 aaPredicted RBP5.07□□□□□ -1.6
SPR28YDR218C RRP9Q06506 573 aaKnown RBP5.07□□□□□ -1.6
SPR28YDR218C YPL191CQ08930 360 aa5.07□□□□□ -1.6
SPR28YDR218C PGC1Q08959 321 aa5.07□□□□□ -1.6
SPR28YDR218C HMG1P12683 1054 aa5.06□□□□□ -1.6
SPR28YDR218C RED1P14291 827 aa5.06□□□□□ -1.6
SPR28YDR218C GFA1P14742 717 aaKnown RBP5.06□□□□□ -1.6
SPR28YDR218C SDS22P36047 338 aa5.06□□□□□ -1.6
SPR28YDR218C BYE1P36106 594 aa5.06□□□□□ -1.6
SPR28YDR218C HSL7P38274 827 aa5.06□□□□□ -1.6
SPR28YDR218C GIC1P38785 314 aa5.06□□□□□ -1.6
SPR28YDR218C UME6P39001 836 aa5.06□□□□□ -1.6
SPR28YDR218C SEC27P41811 889 aaKnown RBP5.06□□□□□ -1.6
SPR28YDR218C GYP8P43570 497 aa5.06□□□□□ -1.6
SPR28YDR218C IRC6P43615 237 aa5.06□□□□□ -1.6
SPR28YDR218C CCM1P48237 864 aaPredicted RBP5.06□□□□□ -1.6
SPR28YDR218C MRPL13Q02204 264 aa5.06□□□□□ -1.6
SPR28YDR218C ATP25Q03153 612 aa5.06□□□□□ -1.6
SPR28YDR218C NHX1Q04121 633 aa5.06□□□□□ -1.6
SPR28YDR218C TAF11Q04226 346 aa5.06□□□□□ -1.6
SPR28YDR218C DBP10Q12389 995 aaKnown RBP5.06□□□□□ -1.6
SPR28YDR218C LAS17Q12446 633 aa5.06□□□□□ -1.6
SPR28YDR218C ORC2P32833 620 aa5.05□□□□□ -1.6
SPR28YDR218C SRP101P32916 621 aa5.05□□□□□ -1.6
SPR28YDR218C TIF4631P39935 952 aaKnown RBP5.05□□□□□ -1.6
SPR28YDR218C KHA1P40309 873 aa5.05□□□□□ -1.6
SPR28YDR218C AXL1P40851 1208 aa5.05□□□□□ -1.6
SPR28YDR218C ARF3P40994 183 aaRIP-Chip data5.05□□□□□ -1.6not detected
SPR28YDR218C SET2P46995 733 aaKnown RBP5.05□□□□□ -1.6
SPR28YDR218C VPS9P54787 451 aa5.05□□□□□ -1.6
SPR28YDR218C ARA2Q04212 335 aa5.05□□□□□ -1.6
SPR28YDR218C MET7Q08645 548 aa5.05□□□□□ -1.6
SPR28YDR218C NUR1Q12066 484 aa5.05□□□□□ -1.6
SPR28YDR218C OSW2Q12202 724 aa5.05□□□□□ -1.6
SPR28YDR218C ISA2Q12425 185 aa5.05□□□□□ -1.6
SPR28YDR218C SEM1O94742 89 aa5.04□□□□□ -1.6
SPR28YDR218C LEU2P04173 364 aaPredicted RBP5.04□□□□□ -1.6
SPR28YDR218C SPE1P08432 466 aa5.04□□□□□ -1.6
SPR28YDR218C NUC1P08466 329 aa5.04□□□□□ -1.6
SPR28YDR218C PFK2P16862 959 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
SPR28YDR218C TRX1P22217 103 aaKnown RBP5.04□□□□□ -1.6
SPR28YDR218C RPN2P32565 945 aaKnown RBP5.04□□□□□ -1.6
SPR28YDR218C EMC3P36039 253 aa5.04□□□□□ -1.6
SPR28YDR218C MRPL36P36531 177 aa5.04□□□□□ -1.6
SPR28YDR218C APM3P38153 483 aa5.04□□□□□ -1.6
SPR28YDR218C NPR3P38742 1146 aa5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms