RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W MMS1Q06211 1407 aa5.85□□□□□ -1.47
FOB1YDR110W ARG3P05150 338 aa5.85□□□□□ -1.47
FOB1YDR110W GRR1P24814 1151 aa5.85□□□□□ -1.47
FOB1YDR110W CBF5P33322 483 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
FOB1YDR110W SET3P36124 751 aa5.85□□□□□ -1.47
FOB1YDR110W SLX1P38324 304 aa5.85□□□□□ -1.47
FOB1YDR110W SMK1P41808 388 aa5.85□□□□□ -1.47
FOB1YDR110W YFL034WP43564 1073 aa5.85□□□□□ -1.47
FOB1YDR110W SAP4P53036 818 aa5.85□□□□□ -1.47
FOB1YDR110W RRT6P53117 311 aaPredicted RBP5.85□□□□□ -1.47
FOB1YDR110W TEP1P53916 434 aa5.85□□□□□ -1.47
FOB1YDR110W ATG26Q06321 1198 aa5.85□□□□□ -1.47
FOB1YDR110W UTP4Q06679 776 aaKnown RBP5.85□□□□□ -1.47
FOB1YDR110W TUM1Q08686 304 aaKnown RBP5.85□□□□□ -1.47
FOB1YDR110W BRR1Q99177 341 aaPredicted RBP5.85□□□□□ -1.47
FOB1YDR110W SPO14P36126 1683 aa5.85□□□□□ -1.47
FOB1YDR110W MLP2P40457 1679 aa5.84□□□□□ -1.47
FOB1YDR110W ULS1Q08562 1619 aa5.84□□□□□ -1.47
FOB1YDR110W APE1P14904 514 aa5.84□□□□□ -1.47
FOB1YDR110W PRP9P19736 530 aaKnown RBP5.84□□□□□ -1.47
FOB1YDR110W OLE1P21147 510 aaKnown RBP5.84□□□□□ -1.47
FOB1YDR110W MGM1P32266 881 aa5.84□□□□□ -1.47
FOB1YDR110W HMX1P32339 317 aa5.84□□□□□ -1.47
FOB1YDR110W RER2P35196 286 aa5.84□□□□□ -1.47
FOB1YDR110W PAN5P38787 379 aa5.84□□□□□ -1.47
FOB1YDR110W YHB1P39676 399 aaKnown RBP5.84□□□□□ -1.47
FOB1YDR110W MBP1P39678 833 aa5.84□□□□□ -1.47
FOB1YDR110W UBP7P40453 1071 aa5.84□□□□□ -1.47
FOB1YDR110W MMM1P41800 426 aa5.84□□□□□ -1.47
FOB1YDR110W CPR6P53691 371 aaKnown RBP5.84□□□□□ -1.47
FOB1YDR110W ARP5P53946 755 aa5.84□□□□□ -1.47
FOB1YDR110W VPS20Q04272 221 aa5.84□□□□□ -1.47
FOB1YDR110W GYL1Q04322 720 aa5.84□□□□□ -1.47
FOB1YDR110W VID22Q05934 901 aa5.84□□□□□ -1.47
FOB1YDR110W KAP95Q06142 861 aaKnown RBP5.84□□□□□ -1.47
FOB1YDR110W SPH1Q06160 661 aa5.84□□□□□ -1.47
FOB1YDR110W ECM7Q06200 448 aa5.84□□□□□ -1.47
FOB1YDR110W ERF2Q06551 359 aa5.84□□□□□ -1.47
FOB1YDR110W VHS3Q08438 674 aa5.84□□□□□ -1.47
FOB1YDR110W TRM8Q12009 286 aa5.84□□□□□ -1.47
FOB1YDR110W SFI1Q12369 946 aa5.84□□□□□ -1.47
FOB1YDR110W ARP7Q12406 477 aa5.84□□□□□ -1.47
FOB1YDR110W RTN2Q12443 393 aa5.84□□□□□ -1.47
FOB1YDR110W SKS1Q12505 502 aa5.84□□□□□ -1.47
FOB1YDR110W PDR12Q02785 1511 aa5.83□□□□□ -1.48
FOB1YDR110W AFR1P33304 620 aa5.83□□□□□ -1.48
FOB1YDR110W YBR284WP38150 797 aa5.83□□□□□ -1.48
FOB1YDR110W MSG5P38590 489 aa5.83□□□□□ -1.48
FOB1YDR110W LAM1P38851 1228 aa5.83□□□□□ -1.48
FOB1YDR110W TEL2P53038 688 aa5.83□□□□□ -1.48
FOB1YDR110W SLD3P53135 668 aa5.83□□□□□ -1.48
FOB1YDR110W CBK1P53894 756 aa5.83□□□□□ -1.48
FOB1YDR110W DON1Q05610 365 aa5.83□□□□□ -1.48
FOB1YDR110W GUD1Q07729 489 aa5.83□□□□□ -1.48
FOB1YDR110W PML1Q07930 204 aaPredicted RBP5.83□□□□□ -1.48
FOB1YDR110W PEX15Q08215 383 aa5.83□□□□□ -1.48
FOB1YDR110W FLP1P03870 423 aa5.82□□□□□ -1.48
FOB1YDR110W POL3P15436 1097 aa5.82□□□□□ -1.48
FOB1YDR110W SGF29P25554 259 aa5.82□□□□□ -1.48
FOB1YDR110W ADK2P26364 225 aa5.82□□□□□ -1.48
FOB1YDR110W YJU2P28320 278 aaPredicted RBP5.82□□□□□ -1.48
FOB1YDR110W SRB4P32569 687 aa5.82□□□□□ -1.48
FOB1YDR110W MGM101P32787 269 aaKnown RBP5.82□□□□□ -1.48
FOB1YDR110W RPT5P33297 434 aaKnown RBP5.82□□□□□ -1.48
FOB1YDR110W IXR1P33417 597 aa5.82□□□□□ -1.48
FOB1YDR110W CUE2P36075 443 aaKnown RBP5.82□□□□□ -1.48
FOB1YDR110W HSL7P38274 827 aa5.82□□□□□ -1.48
FOB1YDR110W PCM1P38628 557 aaKnown RBP5.82□□□□□ -1.48
FOB1YDR110W HXT13P39924 564 aa5.82□□□□□ -1.48
FOB1YDR110W FTR1P40088 404 aa5.82□□□□□ -1.48
FOB1YDR110W ATF1P40353 525 aa5.82□□□□□ -1.48
FOB1YDR110W LYS14P40971 790 aa5.82□□□□□ -1.48
FOB1YDR110W UBP6P43593 499 aaKnown RBP5.82□□□□□ -1.48
FOB1YDR110W NUP85P46673 744 aa5.82□□□□□ -1.48
FOB1YDR110W HXT17P53631 564 aa5.82□□□□□ -1.48
FOB1YDR110W YNL144CP53907 740 aa5.82□□□□□ -1.48
FOB1YDR110W HXT15P54854 567 aa5.82□□□□□ -1.48
FOB1YDR110W ECM9Q02202 377 aa5.82□□□□□ -1.48
FOB1YDR110W HLR1Q04429 423 aa5.82□□□□□ -1.48
FOB1YDR110W GTB1Q04924 702 aa5.82□□□□□ -1.48
FOB1YDR110W TFC6Q06339 672 aa5.82□□□□□ -1.48
FOB1YDR110W YOR389WQ08912 624 aa5.82□□□□□ -1.48
FOB1YDR110W YDL206WQ12424 762 aa5.82□□□□□ -1.48
FOB1YDR110W CAR2P07991 424 aaKnown RBP5.82□□□□□ -1.48
FOB1YDR110W RPS6AP0CX37 236 aaKnown RBP5.82□□□□□ -1.48
FOB1YDR110W RPS6BP0CX38 236 aaPredicted RBP5.82□□□□□ -1.48
FOB1YDR110W NCP1P16603 691 aaKnown RBP5.82□□□□□ -1.48
FOB1YDR110W PRP6P19735 899 aaPredicted RBP5.82□□□□□ -1.48
FOB1YDR110W SIS1P25294 352 aaKnown RBP5.82□□□□□ -1.48
FOB1YDR110W RRP43P25359 394 aaPredicted RBP5.82□□□□□ -1.48
FOB1YDR110W SMC1P32908 1225 aa5.82□□□□□ -1.48
FOB1YDR110W YEL1P34225 687 aa5.82□□□□□ -1.48
FOB1YDR110W BMH2P34730 273 aaKnown RBP5.82□□□□□ -1.48
FOB1YDR110W UBP11P36026 717 aa5.82□□□□□ -1.48
FOB1YDR110W PXL1P36166 706 aa5.82□□□□□ -1.48
FOB1YDR110W MMS4P38257 691 aa5.82□□□□□ -1.48
FOB1YDR110W YSW1P38280 609 aa5.82□□□□□ -1.48
FOB1YDR110W MSR1P38714 643 aa5.82□□□□□ -1.48
FOB1YDR110W MRX1P40050 688 aa5.82□□□□□ -1.48
FOB1YDR110W EMP65P40085 556 aa5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms