RNA–Protein interactions for RNA: YCL052C

PBN1, Transcript of Component of glycosylphosphatidylinositol-mannosyltransferase I, yeast

Gene PBN1, Length 1,251 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBN1	YCL052C	RPL8B	P29453	256 aa	Known RBP	4.62	□□□□□ -1.67
PBN1	YCL052C	SRB4	P32569	687 aa		4.62	□□□□□ -1.67
PBN1	YCL052C	SLA2	P33338	968 aa		4.62	□□□□□ -1.67
PBN1	YCL052C	BYE1	P36106	594 aa		4.62	□□□□□ -1.67
PBN1	YCL052C	ERG7	P38604	731 aa		4.62	□□□□□ -1.67
PBN1	YCL052C	SMF1	P38925	575 aa		4.62	□□□□□ -1.67
PBN1	YCL052C	STT3	P39007	718 aa	Known RBP	4.62	□□□□□ -1.67
PBN1	YCL052C	MEF2	P39677	819 aa		4.62	□□□□□ -1.67
PBN1	YCL052C	VPS8	P39702	1274 aa		4.62	□□□□□ -1.67
PBN1	YCL052C	EFM4	P40516	257 aa		4.62	□□□□□ -1.67
PBN1	YCL052C	YGL176C	P46945	554 aa		4.62	□□□□□ -1.67
PBN1	YCL052C	UBA2	P52488	636 aa		4.62	□□□□□ -1.67
PBN1	YCL052C	SDA1	P53313	767 aa	Known RBP	4.62	□□□□□ -1.67
PBN1	YCL052C	GCN5	Q03330	439 aa		4.62	□□□□□ -1.67
PBN1	YCL052C	RSM24	Q03976	319 aa		4.62	□□□□□ -1.67
PBN1	YCL052C	YLR225C	Q05948	407 aa	Known RBP	4.62	□□□□□ -1.67
PBN1	YCL052C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
PBN1	YCL052C	YPL216W	Q08964	1102 aa		4.62	□□□□□ -1.67
PBN1	YCL052C	ACM1	Q08981	209 aa		4.62	□□□□□ -1.67
PBN1	YCL052C	RKM4	Q12504	494 aa		4.62	□□□□□ -1.67
PBN1	YCL052C	FIG2	P25653	1609 aa		4.61	□□□□□ -1.67
PBN1	YCL052C	TOM70	P07213	617 aa	Known RBP	4.61	□□□□□ -1.67
PBN1	YCL052C	THR4	P16120	514 aa	Known RBP	4.61	□□□□□ -1.67
PBN1	YCL052C	ACE2	P21192	770 aa		4.61	□□□□□ -1.67
PBN1	YCL052C	RAD57	P25301	460 aa		4.61	□□□□□ -1.67
PBN1	YCL052C	APL1	P27351	700 aa		4.61	□□□□□ -1.67
PBN1	YCL052C	YKL107W	P34251	309 aa		4.61	□□□□□ -1.67
PBN1	YCL052C	PNT1	P38969	423 aa		4.61	□□□□□ -1.67
PBN1	YCL052C	BUD16	P39988	312 aa		4.61	□□□□□ -1.67
PBN1	YCL052C	VFA1	P40080	203 aa		4.61	□□□□□ -1.67
PBN1	YCL052C	SIP5	P40210	489 aa	Known RBP	4.61	□□□□□ -1.67
PBN1	YCL052C	VTC2	P43585	828 aa		4.61	□□□□□ -1.67
PBN1	YCL052C	HFM1	P51979	1187 aa		4.61	□□□□□ -1.67
PBN1	YCL052C	YMR102C	Q03177	834 aa		4.61	□□□□□ -1.67
PBN1	YCL052C	PRP42	Q03776	544 aa	Known RBP	4.61	□□□□□ -1.67
PBN1	YCL052C	OMS1	Q06668	471 aa		4.61	□□□□□ -1.67
PBN1	YCL052C	SPO75	Q07798	868 aa		4.61	□□□□□ -1.67
PBN1	YCL052C	YLR001C	Q07895	862 aa		4.61	□□□□□ -1.67
PBN1	YCL052C	YAP7	Q08182	245 aa		4.61	□□□□□ -1.67
PBN1	YCL052C	SLK19	Q08581	821 aa	Known RBP	4.61	□□□□□ -1.67
PBN1	YCL052C	NEW1	Q08972	1196 aa	Known RBP	4.61	□□□□□ -1.67
PBN1	YCL052C	CWC2	Q12046	339 aa	Predicted RBP	4.61	□□□□□ -1.67
PBN1	YCL052C	PSF3	Q12146	194 aa		4.61	□□□□□ -1.67
PBN1	YCL052C	RUD3	Q12234	484 aa	Known RBP	4.61	□□□□□ -1.67
PBN1	YCL052C	PPR1	P07272	904 aa	Predicted RBP	4.6	□□□□□ -1.67
PBN1	YCL052C	SNF3	P10870	884 aa		4.6	□□□□□ -1.67
PBN1	YCL052C	OM45	P16547	393 aa		4.6	□□□□□ -1.67
PBN1	YCL052C	YKL091C	P33324	310 aa	Known RBP	4.6	□□□□□ -1.67
PBN1	YCL052C	SAS3	P34218	831 aa		4.6	□□□□□ -1.67
PBN1	YCL052C	MUD2	P36084	527 aa	Known RBP	4.6	□□□□□ -1.67
PBN1	YCL052C	PET10	P36139	283 aa		4.6	□□□□□ -1.67
PBN1	YCL052C	TOM71	P38825	639 aa	Known RBP	4.6	□□□□□ -1.67
PBN1	YCL052C	HUL4	P40985	892 aa		4.6	□□□□□ -1.67
PBN1	YCL052C	IES1	P43579	692 aa		4.6	□□□□□ -1.67
PBN1	YCL052C	MIC19	P43594	170 aa		4.6	□□□□□ -1.67
PBN1	YCL052C	CTK3	P46963	296 aa	Predicted RBP	4.6	□□□□□ -1.67
PBN1	YCL052C	YGR153W	P48238	217 aa		4.6	□□□□□ -1.67
PBN1	YCL052C	LYS4	P49367	693 aa	Predicted RBP	4.6	□□□□□ -1.67
PBN1	YCL052C	YGR053C	P53234	283 aa		4.6	□□□□□ -1.67
PBN1	YCL052C	GTF1	P53260	183 aa	Predicted RBP	4.6	□□□□□ -1.67
PBN1	YCL052C	RET3	P53600	189 aa		4.6	□□□□□ -1.67
PBN1	YCL052C	SPO20	Q04359	397 aa		4.6	□□□□□ -1.67
PBN1	YCL052C	ADY4	Q05955	493 aa		4.6	□□□□□ -1.67
PBN1	YCL052C	JIP5	Q06214	492 aa	Predicted RBP	4.6	□□□□□ -1.67
PBN1	YCL052C	DSE3	Q08729	430 aa		4.6	□□□□□ -1.67
PBN1	YCL052C	KEL3	Q08979	651 aa	Predicted RBP	4.6	□□□□□ -1.67
PBN1	YCL052C	PMD1	P32634	1753 aa		4.6	□□□□□ -1.67
PBN1	YCL052C	FOB1	O13329	566 aa		4.59	□□□□□ -1.67
PBN1	YCL052C	TOP1	P04786	769 aa		4.59	□□□□□ -1.67
PBN1	YCL052C	SRP54	P20424	541 aa	Known RBP	4.59	□□□□□ -1.67
PBN1	YCL052C	CKI1	P20485	582 aa		4.59	□□□□□ -1.67
PBN1	YCL052C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
PBN1	YCL052C	PAP1	P29468	568 aa	Known RBP	4.59	□□□□□ -1.67
PBN1	YCL052C	ECM32	P32644	1121 aa	Known RBP	4.59	□□□□□ -1.67
PBN1	YCL052C	FLO1	P32768	1537 aa		4.59	□□□□□ -1.67
PBN1	YCL052C	ABD1	P32783	436 aa	Predicted RBP	4.59	□□□□□ -1.67
PBN1	YCL052C	NFU1	P32860	256 aa		4.59	□□□□□ -1.67
PBN1	YCL052C	CNS1	P33313	385 aa		4.59	□□□□□ -1.67
PBN1	YCL052C	SMC2	P38989	1170 aa	Known RBP	4.59	□□□□□ -1.67
PBN1	YCL052C	CCT3	P39077	534 aa	Known RBP	4.59	□□□□□ -1.67
PBN1	YCL052C	YMR124W	P39523	943 aa	Known RBP	4.59	□□□□□ -1.67
PBN1	YCL052C	MAD1	P40957	749 aa		4.59	□□□□□ -1.67
PBN1	YCL052C	THI6	P41835	540 aa		4.59	□□□□□ -1.67
PBN1	YCL052C	GSM1	P42950	618 aa		4.59	□□□□□ -1.67
PBN1	YCL052C	BNI5	P53890	448 aa	Known RBP	4.59	□□□□□ -1.67
PBN1	YCL052C	MDM1	Q01846	1127 aa		4.59	□□□□□ -1.67
PBN1	YCL052C	VPS30	Q02948	557 aa		4.59	□□□□□ -1.67
PBN1	YCL052C	NGL3	Q03210	505 aa		4.59	□□□□□ -1.67
PBN1	YCL052C	VPS16	Q03308	798 aa		4.59	□□□□□ -1.67
PBN1	YCL052C	CLU1	Q03690	1277 aa	Known RBP	4.59	□□□□□ -1.67
PBN1	YCL052C	UBX2	Q04228	584 aa		4.59	□□□□□ -1.67
PBN1	YCL052C	CSM3	Q04659	317 aa		4.59	□□□□□ -1.67
PBN1	YCL052C	SOV1	Q04748	898 aa		4.59	□□□□□ -1.67
PBN1	YCL052C	SFH1	Q06168	426 aa		4.59	□□□□□ -1.67
PBN1	YCL052C	OPY2	Q06810	360 aa		4.59	□□□□□ -1.67
PBN1	YCL052C	WRS1	Q12109	432 aa	Known RBP	4.59	□□□□□ -1.67
PBN1	YCL052C	YLR358C	O13565	187 aa		4.58	□□□□□ -1.68
PBN1	YCL052C	RAD1	P06777	1100 aa		4.58	□□□□□ -1.68
PBN1	YCL052C	KIN2	P13186	1147 aa	Known RBP	4.58	□□□□□ -1.68
PBN1	YCL052C	CLN2	P20438	545 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms