RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	MCM7	P38132	845 aa		4.01	□□□□□ -1.77
YAL004W	YAL004W	JEM1	P40358	645 aa		4.01	□□□□□ -1.77
YAL004W	YAL004W	YGR153W	P48238	217 aa		4.01	□□□□□ -1.77
YAL004W	YAL004W	YML6	P51998	286 aa		4.01	□□□□□ -1.77
YAL004W	YAL004W	MRPL19	P53875	158 aa		4.01	□□□□□ -1.77
YAL004W	YAL004W	YNL058C	P53947	316 aa		4.01	□□□□□ -1.77
YAL004W	YAL004W	ADE16	P54113	591 aa	Known RBP	4.01	□□□□□ -1.77
YAL004W	YAL004W	NOG1	Q02892	647 aa	Known RBP	4.01	□□□□□ -1.77
YAL004W	YAL004W	YKU80	Q04437	629 aa		4.01	□□□□□ -1.77
YAL004W	YAL004W	TDA9	Q04545	1251 aa		4.01	□□□□□ -1.77
YAL004W	YAL004W	COG8	Q04632	607 aa		4.01	□□□□□ -1.77
YAL004W	YAL004W	GSF2	Q04697	403 aa	Known RBP	4.01	□□□□□ -1.77
YAL004W	YAL004W	TRE1	Q08919	783 aa		4.01	□□□□□ -1.77
YAL004W	YAL004W	YPL191C	Q08930	360 aa		4.01	□□□□□ -1.77
YAL004W	YAL004W	TAH18	Q12181	623 aa		4.01	□□□□□ -1.77
YAL004W	YAL004W	YPL066W	Q12194	479 aa		4.01	□□□□□ -1.77
YAL004W	YAL004W	YVC1	Q12324	675 aa		4.01	□□□□□ -1.77
YAL004W	YAL004W	YPR071W	Q12346	211 aa		4.01	□□□□□ -1.77
YAL004W	YAL004W	SMC6	Q12749	1114 aa		4.01	□□□□□ -1.77
YAL004W	YAL004W	SNF2	P22082	1703 aa		4.01	□□□□□ -1.77
YAL004W	YAL004W	ENA1	P13587	1091 aa		4	□□□□□ -1.77
YAL004W	YAL004W	AAC3	P18238	307 aa		4	□□□□□ -1.77
YAL004W	YAL004W	SYP1	P25623	870 aa	Known RBP	4	□□□□□ -1.77
YAL004W	YAL004W	DBF4	P32325	704 aa		4	□□□□□ -1.77
YAL004W	YAL004W	PAH1	P32567	862 aa		4	□□□□□ -1.77
YAL004W	YAL004W	RAD24	P32641	659 aa		4	□□□□□ -1.77
YAL004W	YAL004W	YKU70	P32807	602 aa		4	□□□□□ -1.77
YAL004W	YAL004W	DUR3	P33413	735 aa		4	□□□□□ -1.77
YAL004W	YAL004W	MUD2	P36084	527 aa	Known RBP	4	□□□□□ -1.77
YAL004W	YAL004W	PCM1	P38628	557 aa	Known RBP	4	□□□□□ -1.77
YAL004W	YAL004W	LRP1	P38801	184 aa	Known RBP	4	□□□□□ -1.77
YAL004W	YAL004W	SHU2	P38957	223 aa		4	□□□□□ -1.77
YAL004W	YAL004W	SIT1	P39980	628 aa		4	□□□□□ -1.77
YAL004W	YAL004W	KAP123	P40069	1113 aa	Known RBP	4	□□□□□ -1.77
YAL004W	YAL004W	VPS53	P47061	822 aa		4	□□□□□ -1.77
YAL004W	YAL004W	SPO1	P53541	631 aa		4	□□□□□ -1.77
YAL004W	YAL004W	ENA2	Q01896	1091 aa		4	□□□□□ -1.77
YAL004W	YAL004W	SKY1	Q03656	742 aa		4	□□□□□ -1.77
YAL004W	YAL004W	NKP2	Q06162	153 aa		4	□□□□□ -1.77
YAL004W	YAL004W	YIG1	Q08956	461 aa		4	□□□□□ -1.77
YAL004W	YAL004W	PGC1	Q08959	321 aa		4	□□□□□ -1.77
YAL004W	YAL004W	YPR027C	Q12079	277 aa		4	□□□□□ -1.77
YAL004W	YAL004W	ENA5	Q12691	1091 aa		4	□□□□□ -1.77
YAL004W	YAL004W	APC1	P53886	1748 aa		4	□□□□□ -1.77
YAL004W	YAL004W	HEM13	P11353	328 aa	Known RBP	3.99	□□□□□ -1.77
YAL004W	YAL004W	PCT1	P13259	424 aa		3.99	□□□□□ -1.77
YAL004W	YAL004W	DAL7	P21826	554 aa		3.99	□□□□□ -1.77
YAL004W	YAL004W	MSH1	P25846	959 aa		3.99	□□□□□ -1.77
YAL004W	YAL004W	CMK1	P27466	446 aa	Known RBP	3.99	□□□□□ -1.77
YAL004W	YAL004W	NOP16	P40007	231 aa	Known RBP	3.99	□□□□□ -1.77
YAL004W	YAL004W	SEC27	P41811	889 aa	Known RBP	3.99	□□□□□ -1.77
YAL004W	YAL004W	UPF3	P48412	387 aa	Known RBP	3.99	□□□□□ -1.77
YAL004W	YAL004W	ZIP2	P53061	704 aa		3.99	□□□□□ -1.77
YAL004W	YAL004W	PCL10	P53124	433 aa		3.99	□□□□□ -1.77
YAL004W	YAL004W	CNM67	P53865	581 aa	Known RBP	3.99	□□□□□ -1.77
YAL004W	YAL004W	MRPL22	P53881	309 aa		3.99	□□□□□ -1.77
YAL004W	YAL004W	RMT2	Q03305	412 aa		3.99	□□□□□ -1.77
YAL004W	YAL004W	SYF1	Q04048	859 aa	Predicted RBP	3.99	□□□□□ -1.77
YAL004W	YAL004W	TAF11	Q04226	346 aa		3.99	□□□□□ -1.77
YAL004W	YAL004W	CIA1	Q05583	330 aa		3.99	□□□□□ -1.77
YAL004W	YAL004W	YLR257W	Q06146	321 aa	Known RBP	3.99	□□□□□ -1.77
YAL004W	YAL004W	NOP58	Q12499	511 aa	Known RBP	3.99	□□□□□ -1.77
YAL004W	YAL004W	YRF1-2	P40105	1681 aa		3.99	□□□□□ -1.77
YAL004W	YAL004W	SWI1	P09547	1314 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	STF1	P01098	86 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	GFA1	P14742	717 aa	Known RBP	3.98	□□□□□ -1.77
YAL004W	YAL004W	HCA4	P20448	770 aa	Known RBP	3.98	□□□□□ -1.77
YAL004W	YAL004W	DBP5	P20449	482 aa	Known RBP	3.98	□□□□□ -1.77
YAL004W	YAL004W	DPH2	P32461	534 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	ORC2	P32833	620 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	SLC1	P33333	303 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	RDH54	P38086	958 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	RFC1	P38630	861 aa	Known RBP	3.98	□□□□□ -1.77
YAL004W	YAL004W	TDA3	P38758	523 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	PPE1	P38796	400 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	YHR218W	P38899	603 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	YIL166C	P40445	542 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	SMK1	P41808	388 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	CAF16	P43569	289 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	IRC6	P43615	237 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	YBP2	P53169	641 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	TEP1	P53916	434 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	TIM10	P87108	93 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	GRX3	Q03835	250 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	ARA2	Q04212	335 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	HEL2	Q05580	639 aa	Known RBP	3.98	□□□□□ -1.77
YAL004W	YAL004W	ECM38	Q05902	660 aa	Predicted RBP	3.98	□□□□□ -1.77
YAL004W	YAL004W	YCG1	Q06680	1035 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	MDM38	Q08179	573 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	ALE1	Q08548	619 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	GUP2	Q08929	609 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	SGT2	Q12118	346 aa	Known RBP	3.98	□□□□□ -1.77
YAL004W	YAL004W	CEX1	Q12453	761 aa		3.98	□□□□□ -1.77
YAL004W	YAL004W	SOD2	P00447	233 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	BI4	P03879	638 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	HMG1	P12683	1054 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	CLC1	P17891	233 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	ROX1	P25042	368 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	HOG1	P32485	435 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	RPT3	P33298	428 aa	Known RBP	3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms