RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Hspd1P63038 573 aaKnown RBP13.13□□□□□ -0.31
Lig1-211ENSMUST00000177588 ZyxQ62523 564 aa13.13□□□□□ -0.31
Lig1-211ENSMUST00000177588 Ankle2Q6P1H6 964 aa13.13□□□□□ -0.31
Lig1-211ENSMUST00000177588 Ankrd23Q812A3 306 aa13.13□□□□□ -0.31
Lig1-211ENSMUST00000177588 Pm20d1Q8C165 503 aa13.13□□□□□ -0.31
Lig1-211ENSMUST00000177588 Luzp1Q8R4U7 1068 aaKnown RBP13.13□□□□□ -0.31
Lig1-211ENSMUST00000177588 Hps3Q91VB4 1002 aa13.13□□□□□ -0.31
Lig1-211ENSMUST00000177588 Samsn1P57725 372 aa13.13□□□□□ -0.31
Lig1-211ENSMUST00000177588 Ppp4r3aQ6P2K6 820 aa13.13□□□□□ -0.31
Lig1-211ENSMUST00000177588 Fez2Q6TYB5 348 aa13.13□□□□□ -0.31
Lig1-211ENSMUST00000177588 Dnm3Q8BZ98 863 aa13.13□□□□□ -0.31
Lig1-211ENSMUST00000177588 Pes1Q9EQ61 584 aaKnown RBP13.13□□□□□ -0.31
Lig1-211ENSMUST00000177588 Usp42B2RQC2 1324 aaKnown RBP13.13□□□□□ -0.31
Lig1-211ENSMUST00000177588 Gnat3Q3V3I2 354 aa13.12□□□□□ -0.31
Lig1-211ENSMUST00000177588 Ncaph2Q8BSP2 607 aa13.12□□□□□ -0.31
Lig1-211ENSMUST00000177588 Fam53cQ8BXQ8 393 aa13.12□□□□□ -0.31
Lig1-211ENSMUST00000177588 Terf2ipQ91VL8 393 aa13.12□□□□□ -0.31
Lig1-211ENSMUST00000177588 Clic4Q9QYB1 253 aa13.12□□□□□ -0.31
Lig1-211ENSMUST00000177588 PappaQ8R4K8 1624 aa13.12□□□□□ -0.31
Lig1-211ENSMUST00000177588 Samd1D3YXK1 519 aa13.12□□□□□ -0.31
Lig1-211ENSMUST00000177588 NfkbibQ60778 359 aa13.12□□□□□ -0.31
Lig1-211ENSMUST00000177588 Soga3Q6NZL0 945 aa13.12□□□□□ -0.31
Lig1-211ENSMUST00000177588 Frat2Q8K025 231 aa13.12□□□□□ -0.31
Lig1-211ENSMUST00000177588 Alg3Q8K2A8 438 aa13.12□□□□□ -0.31
Lig1-211ENSMUST00000177588 Nop2Q922K7 793 aaKnown RBP13.12□□□□□ -0.31
Lig1-211ENSMUST00000177588 Gtpbp4Q99ME9 634 aaKnown RBP13.12□□□□□ -0.31
Lig1-211ENSMUST00000177588 Hdac6Q9Z2V5 1149 aa13.12□□□□□ -0.31
Lig1-211ENSMUST00000177588 Sipa1l3G3X9J0 1776 aa13.12□□□□□ -0.31
Lig1-211ENSMUST00000177588 Ddb1Q3U1J4 1140 aaKnown RBP13.12□□□□□ -0.31
Lig1-211ENSMUST00000177588 Cfap99A0A140LIX9 648 aa13.11□□□□□ -0.31
Lig1-211ENSMUST00000177588 Jakmip2D3YXK0 820 aa13.11□□□□□ -0.31
Lig1-211ENSMUST00000177588 Tulp1Q9Z273 543 aa13.11□□□□□ -0.31
Lig1-211ENSMUST00000177588 Syde2E9PUP1 1314 aa13.11□□□□□ -0.31
Lig1-211ENSMUST00000177588 Sos2Q02384 1333 aa13.11□□□□□ -0.31
Lig1-211ENSMUST00000177588 Crb1Q8VHS2 1405 aa13.11□□□□□ -0.31
Lig1-211ENSMUST00000177588 Ccdc121E9Q6D3 323 aa13.11□□□□□ -0.31
Lig1-211ENSMUST00000177588 Sult6b1P0CC03 303 aa13.11□□□□□ -0.31
Lig1-211ENSMUST00000177588 H2afxP27661 143 aaKnown RBP13.11□□□□□ -0.31
Lig1-211ENSMUST00000177588 Kif2aP28740 705 aa13.11□□□□□ -0.31
Lig1-211ENSMUST00000177588 Irx2P81066 474 aa13.11□□□□□ -0.31
Lig1-211ENSMUST00000177588 Spata32Q8C5V0 334 aa13.11□□□□□ -0.31
Lig1-211ENSMUST00000177588 Stk38Q91VJ4 465 aa13.11□□□□□ -0.31
Lig1-211ENSMUST00000177588 Tomm22Q9CPQ3 142 aa13.11□□□□□ -0.31
Lig1-211ENSMUST00000177588 Sall1Q9ER74 1322 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Timm10P62073 90 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Cdc37Q61081 379 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Atg9aQ68FE2 551 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Srek1Q8BZX4 494 aaKnown RBP13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Ddx27Q921N6 760 aaKnown RBP13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Prl3d3A0A0M6L0J6 224 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Zfp597E9Q6S0 419 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Bin1O08539 588 aaKnown RBP13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 MpndQ3TV65 487 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Fkbp5Q64378 456 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Tmc2Q8R4P4 888 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Abca3Q8R420 1704 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 AtrnQ9WU60 1428 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 CoblQ5NBX1 1337 aaKnown RBP13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Shank3Q4ACU6 1730 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Gm43638A0A0J9YU36 694 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Serpinb6bO08804 377 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Gm12185Q5NCB2 835 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Ddx58Q6Q899 926 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 U2af1l4Q8BGJ9 220 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Mei4Q8BRM6 389 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Trim52Q8CDV4 233 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Sox30Q8CGW4 782 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Rbm17Q8JZX4 405 aaKnown RBP13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 SdsQ8VBT2 327 aa13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Yeats4Q9CR11 227 aaKnown RBP13.1□□□□□ -0.31
Lig1-211ENSMUST00000177588 Wdr19Q3UGF1 1341 aa13.09□□□□□ -0.31
Lig1-211ENSMUST00000177588 Ercc3P49135 783 aa13.09□□□□□ -0.31
Lig1-211ENSMUST00000177588 Sptlc2P97363 560 aaKnown RBP13.09□□□□□ -0.31
Lig1-211ENSMUST00000177588 Spag5Q7TME2 1165 aa13.09□□□□□ -0.31
Lig1-211ENSMUST00000177588 Fam102bQ8BQS4 339 aa13.09□□□□□ -0.31
Lig1-211ENSMUST00000177588 Zfp202Q8C879 641 aa13.09□□□□□ -0.31
Lig1-211ENSMUST00000177588 Rrs1Q9CYH6 365 aaKnown RBP13.09□□□□□ -0.31
Lig1-211ENSMUST00000177588 Nwd2Q6P5U7 1742 aa13.09□□□□□ -0.31
Lig1-211ENSMUST00000177588 Gm29094F6Q785 221 aa13.09□□□□□ -0.31
Lig1-211ENSMUST00000177588 Dcaf5Q80T85 946 aa13.09□□□□□ -0.31
Lig1-211ENSMUST00000177588 AidaQ8C4Q6 305 aa13.09□□□□□ -0.31
Lig1-211ENSMUST00000177588 MthfsQ9D110 203 aa13.09□□□□□ -0.31
Lig1-211ENSMUST00000177588 Stxbp4Q9WV89 557 aa13.09□□□□□ -0.31
Lig1-211ENSMUST00000177588 Grin2dQ03391 1323 aa13.08□□□□□ -0.31
Lig1-211ENSMUST00000177588 Npc1l1Q6T3U4 1333 aa13.08□□□□□ -0.31
Lig1-211ENSMUST00000177588 Vmn2r23E9PXI5 849 aa13.08□□□□□ -0.32
Lig1-211ENSMUST00000177588 Trim56Q80VI1 734 aaKnown RBP13.08□□□□□ -0.32
Lig1-211ENSMUST00000177588 RbsnQ80Y56 783 aa13.08□□□□□ -0.32
Lig1-211ENSMUST00000177588 Tmem67Q8BR76 992 aa13.08□□□□□ -0.32
Lig1-211ENSMUST00000177588 Ankrd1Q9CR42 319 aa13.08□□□□□ -0.32
Lig1-211ENSMUST00000177588 Ccng2O08918 344 aa13.08□□□□□ -0.32
Lig1-211ENSMUST00000177588 Kcnj4P52189 445 aa13.08□□□□□ -0.32
Lig1-211ENSMUST00000177588 Tshz1Q5DTH5 1084 aa13.08□□□□□ -0.32
Lig1-211ENSMUST00000177588 Znf532Q6NXK2 1036 aa13.08□□□□□ -0.32
Lig1-211ENSMUST00000177588 Zbtb40Q6PCS8 1258 aa13.08□□□□□ -0.32
Lig1-211ENSMUST00000177588 Jmjd4Q8BFT6 427 aa13.08□□□□□ -0.32
Lig1-211ENSMUST00000177588 Shisa4Q8CA71 197 aa13.08□□□□□ -0.32
Lig1-211ENSMUST00000177588 Nbr1P97432 988 aa13.08□□□□□ -0.32
Lig1-211ENSMUST00000177588 Kmt5bQ3U8K7 883 aa13.08□□□□□ -0.32
Lig1-211ENSMUST00000177588 Spty2d1Q68FG3 682 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms