Protein–RNA interactions for Protein: A0A0J9YU36

Gm43638, Predicted gene 43638, mousemouse

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm43638A0A0J9YU36 Gm25239-201ENSMUST00000174915 86 ntBASIC40.49■■■■■ 4.07
Gm43638A0A0J9YU36 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
Gm43638A0A0J9YU36 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
Gm43638A0A0J9YU36 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.96■■■■□ 3.67
Gm43638A0A0J9YU36 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
Gm43638A0A0J9YU36 Psd-208ENSMUST00000224556 2034 ntBASIC36.68■■■■□ 3.46
Gm43638A0A0J9YU36 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
Gm43638A0A0J9YU36 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.41
Gm43638A0A0J9YU36 Gm15042-201ENSMUST00000120212 883 ntBASIC36.19■■■■□ 3.38
Gm43638A0A0J9YU36 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.83■■■■□ 3.33
Gm43638A0A0J9YU36 Gm15045-201ENSMUST00000117359 883 ntBASIC35.59■■■■□ 3.29
Gm43638A0A0J9YU36 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
Gm43638A0A0J9YU36 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
Gm43638A0A0J9YU36 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.43■■■■□ 3.26
Gm43638A0A0J9YU36 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.22
Gm43638A0A0J9YU36 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
Gm43638A0A0J9YU36 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Gm43638A0A0J9YU36 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Gm43638A0A0J9YU36 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.85■■■■□ 3.17
Gm43638A0A0J9YU36 Gm24109-201ENSMUST00000175489 103 ntBASIC34.75■■■■□ 3.15
Gm43638A0A0J9YU36 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Gm43638A0A0J9YU36 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.58■■■■□ 3.13
Gm43638A0A0J9YU36 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Gm43638A0A0J9YU36 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Gm43638A0A0J9YU36 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
Gm43638A0A0J9YU36 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.45■■■■□ 3.11
Gm43638A0A0J9YU36 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.39■■■■□ 3.1
Gm43638A0A0J9YU36 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.37■■■■□ 3.09
Gm43638A0A0J9YU36 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34.17■■■■□ 3.06
Gm43638A0A0J9YU36 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.15■■■■□ 3.06
Gm43638A0A0J9YU36 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.13■■■■□ 3.05
Gm43638A0A0J9YU36 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Gm43638A0A0J9YU36 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Gm43638A0A0J9YU36 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Gm43638A0A0J9YU36 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Gm43638A0A0J9YU36 Gm23366-201ENSMUST00000175022 89 ntBASIC33.91■■■■□ 3.02
Gm43638A0A0J9YU36 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.84■■■■□ 3.01
Gm43638A0A0J9YU36 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Gm43638A0A0J9YU36 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Gm43638A0A0J9YU36 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.64■■■□□ 2.98
Gm43638A0A0J9YU36 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33.61■■■□□ 2.97
Gm43638A0A0J9YU36 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
Gm43638A0A0J9YU36 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.53■■■□□ 2.96
Gm43638A0A0J9YU36 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
Gm43638A0A0J9YU36 Gm10524-201ENSMUST00000181931 1893 ntBASIC33.43■■■□□ 2.94
Gm43638A0A0J9YU36 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Gm43638A0A0J9YU36 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Gm43638A0A0J9YU36 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
Gm43638A0A0J9YU36 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.25■■■□□ 2.91
Gm43638A0A0J9YU36 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.23■■■□□ 2.91
Gm43638A0A0J9YU36 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Gm43638A0A0J9YU36 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Gm43638A0A0J9YU36 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.76■■■□□ 2.83
Gm43638A0A0J9YU36 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Gm43638A0A0J9YU36 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Gm43638A0A0J9YU36 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.61■■■□□ 2.81
Gm43638A0A0J9YU36 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.61■■■□□ 2.81
Gm43638A0A0J9YU36 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Gm43638A0A0J9YU36 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
Gm43638A0A0J9YU36 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.46■■■□□ 2.79
Gm43638A0A0J9YU36 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Gm43638A0A0J9YU36 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.38■■■□□ 2.77
Gm43638A0A0J9YU36 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Gm43638A0A0J9YU36 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
Gm43638A0A0J9YU36 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.32■■■□□ 2.76
Gm43638A0A0J9YU36 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Gm43638A0A0J9YU36 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.3■■■□□ 2.76
Gm43638A0A0J9YU36 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Gm43638A0A0J9YU36 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Gm43638A0A0J9YU36 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
Gm43638A0A0J9YU36 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Gm43638A0A0J9YU36 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Gm43638A0A0J9YU36 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Gm43638A0A0J9YU36 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.03■■■□□ 2.72
Gm43638A0A0J9YU36 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Gm43638A0A0J9YU36 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Gm43638A0A0J9YU36 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32■■■□□ 2.71
Gm43638A0A0J9YU36 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Gm43638A0A0J9YU36 Gm27325-201ENSMUST00000175467 74 ntBASIC31.91■■■□□ 2.7
Gm43638A0A0J9YU36 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Gm43638A0A0J9YU36 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Gm43638A0A0J9YU36 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Gm43638A0A0J9YU36 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Gm43638A0A0J9YU36 Gm25238-201ENSMUST00000174914 89 ntBASIC31.71■■■□□ 2.67
Gm43638A0A0J9YU36 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Gm43638A0A0J9YU36 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Gm43638A0A0J9YU36 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Gm43638A0A0J9YU36 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Gm43638A0A0J9YU36 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Gm43638A0A0J9YU36 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Gm43638A0A0J9YU36 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Gm43638A0A0J9YU36 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
Gm43638A0A0J9YU36 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Gm43638A0A0J9YU36 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.53■■■□□ 2.64
Gm43638A0A0J9YU36 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Gm43638A0A0J9YU36 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Gm43638A0A0J9YU36 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.51■■■□□ 2.63
Gm43638A0A0J9YU36 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.49■■■□□ 2.63
Gm43638A0A0J9YU36 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Gm43638A0A0J9YU36 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.4■■■□□ 2.62
Retrieved 100 of 76,532 protein–RNA pairs in 227 ms