Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
Sox30Q8CGW4 Gm25239-201ENSMUST00000174915 86 ntBASIC38.64■■■■□ 3.78
Sox30Q8CGW4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.47■■■■□ 3.59
Sox30Q8CGW4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
Sox30Q8CGW4 Psd-208ENSMUST00000224556 2034 ntBASIC36.37■■■■□ 3.41
Sox30Q8CGW4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
Sox30Q8CGW4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
Sox30Q8CGW4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.3■■■■□ 3.24
Sox30Q8CGW4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
Sox30Q8CGW4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Sox30Q8CGW4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Sox30Q8CGW4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Sox30Q8CGW4 Gm15042-201ENSMUST00000120212 883 ntBASIC34.8■■■■□ 3.16
Sox30Q8CGW4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Sox30Q8CGW4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Sox30Q8CGW4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Sox30Q8CGW4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.6■■■■□ 3.13
Sox30Q8CGW4 Gm15045-201ENSMUST00000117359 883 ntBASIC34.29■■■■□ 3.08
Sox30Q8CGW4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Sox30Q8CGW4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.15■■■■□ 3.06
Sox30Q8CGW4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.97■■■■□ 3.03
Sox30Q8CGW4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.85■■■■□ 3.01
Sox30Q8CGW4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
Sox30Q8CGW4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.68■■■□□ 2.98
Sox30Q8CGW4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.62■■■□□ 2.97
Sox30Q8CGW4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Sox30Q8CGW4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Sox30Q8CGW4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Sox30Q8CGW4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.45■■■□□ 2.95
Sox30Q8CGW4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33.45■■■□□ 2.95
Sox30Q8CGW4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.42■■■□□ 2.94
Sox30Q8CGW4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
Sox30Q8CGW4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.39■■■□□ 2.94
Sox30Q8CGW4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Sox30Q8CGW4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.22■■■□□ 2.91
Sox30Q8CGW4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
Sox30Q8CGW4 Gm24109-201ENSMUST00000175489 103 ntBASIC33.1■■■□□ 2.89
Sox30Q8CGW4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Sox30Q8CGW4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Sox30Q8CGW4 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.9■■■□□ 2.86
Sox30Q8CGW4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.81■■■□□ 2.84
Sox30Q8CGW4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Sox30Q8CGW4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Sox30Q8CGW4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Sox30Q8CGW4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.45■■■□□ 2.79
Sox30Q8CGW4 Gm23366-201ENSMUST00000175022 89 ntBASIC32.39■■■□□ 2.78
Sox30Q8CGW4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Sox30Q8CGW4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Sox30Q8CGW4 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.36■■■□□ 2.77
Sox30Q8CGW4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Sox30Q8CGW4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Sox30Q8CGW4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Sox30Q8CGW4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Sox30Q8CGW4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
Sox30Q8CGW4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Sox30Q8CGW4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Sox30Q8CGW4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.09■■■□□ 2.73
Sox30Q8CGW4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Sox30Q8CGW4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
Sox30Q8CGW4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Sox30Q8CGW4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.93■■■□□ 2.7
Sox30Q8CGW4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Sox30Q8CGW4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Sox30Q8CGW4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Sox30Q8CGW4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.89■■■□□ 2.7
Sox30Q8CGW4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Sox30Q8CGW4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Sox30Q8CGW4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
Sox30Q8CGW4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Sox30Q8CGW4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Sox30Q8CGW4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Sox30Q8CGW4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Sox30Q8CGW4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Sox30Q8CGW4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Sox30Q8CGW4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Sox30Q8CGW4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Sox30Q8CGW4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.42■■■□□ 2.62
Sox30Q8CGW4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.28■■■□□ 2.6
Sox30Q8CGW4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Sox30Q8CGW4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Sox30Q8CGW4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
Sox30Q8CGW4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Sox30Q8CGW4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Sox30Q8CGW4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Sox30Q8CGW4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Sox30Q8CGW4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Sox30Q8CGW4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
Sox30Q8CGW4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Sox30Q8CGW4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.95■■■□□ 2.54
Sox30Q8CGW4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Sox30Q8CGW4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Sox30Q8CGW4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Sox30Q8CGW4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Sox30Q8CGW4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Sox30Q8CGW4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Sox30Q8CGW4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Sox30Q8CGW4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.76■■■□□ 2.51
Sox30Q8CGW4 Gm27325-201ENSMUST00000175467 74 ntBASIC30.73■■■□□ 2.51
Sox30Q8CGW4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Sox30Q8CGW4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms