RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Sh3bp1P55194 680 aa15.72■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Dclk3Q8BWQ5 790 aa15.72■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Lrrc2Q8VDB8 371 aa15.72■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Kcnn1Q9EQR3 537 aa15.72■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Mlh1Q9JK91 760 aa15.72■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Ccdc152E9PX14 254 aa15.72■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Haus1Q8BHX1 278 aa15.72■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Tab2Q99K90 693 aa15.72■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Nip7Q9CXK8 180 aaKnown RBP15.72■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Fam204aQ8C6C7 236 aa15.72■□□□□ 0.11
Col3a1-201ENSMUST00000087883 IqcdQ9D3V1 458 aa15.72■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Taf7Q9R1C0 341 aa15.72■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Rapgef1Q3UHC1 1224 aa15.72■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Tubb2aQ7TMM9 445 aa15.72■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Tubb2bQ9CWF2 445 aa15.72■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Atp2a2O55143 1044 aaKnown RBP15.71■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Nlrp2Q4PLS0 1046 aaKnown RBP15.71■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Ankrd35E9Q9D8 996 aa15.71■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Diaph2O70566 1098 aa15.71■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Eps15P42567 897 aa15.71■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Dnajc21E9Q8D0 531 aa15.71■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Clec11aO88200 328 aa15.71■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Plcb3P51432 1234 aaKnown RBP15.71■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Ccpg1Q640L3 753 aa15.71■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Mcur1Q9CXD6 340 aa15.71■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Mtx1P47802 317 aa15.71■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Dzip1lQ499E4 774 aa15.71■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Ints8Q80V86 995 aa15.71■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Efcab2Q9CQ46 164 aa15.71■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Efhd1Q9D4J1 240 aa15.71■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Ccdc157Q5SPX1 718 aa15.7■□□□□ 0.1
Col3a1-201ENSMUST00000087883 MycbpapQ5SUV2 932 aa15.7■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Cavin2Q63918 418 aaKnown RBP15.7■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Maip1Q8BHE8 291 aa15.7■□□□□ 0.1
Col3a1-201ENSMUST00000087883 JmyQ9QXM1 983 aa15.7■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Atf7ipQ7TT18 1306 aa15.7■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Gm45015A0A140LII9 184 aa15.7■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Micall1Q8BGT6 870 aa15.7■□□□□ 0.1
Col3a1-201ENSMUST00000087883 GckrQ91X44 587 aa15.7■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Map3k9Q3U1V8 1077 aa15.7■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Gm5934D3Z4U6 212 aa15.7■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Utp18Q5SSI6 552 aaKnown RBP15.7■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Syap1Q9D5V6 365 aa15.7■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Zc3h12cQ5DTV4 884 aa15.7■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Vamp4O70480 141 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Wdr93Q402B2 695 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Exoc3l2D3YUP5 789 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Dcaf17Q3TUL7 519 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Snx25Q3ZT31 840 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 PpardP35396 440 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 EsrrbQ61539 433 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Tmem132eQ6IEE6 982 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Igsf3Q6ZQA6 1194 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Zranb1Q7M760 708 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Wdr3Q8BHB4 942 aaKnown RBP15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Rps6kb1Q8BSK8 525 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Aldh1l2Q8K009 923 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Stx17Q9D0I4 301 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Cabp5Q9JLK3 173 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Dpf1Q9QX66 387 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 RpgrQ9R0X5 1001 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Frmpd2A0A140LI67 1392 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Epb41l2O70318 988 aaKnown RBP15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Ier5O89113 308 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Akr1b8P45377 316 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Trim6Q8BGE7 488 aa15.69■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Gm5624F6ZZG8 207 aa15.68■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Rab44Q8CB87 725 aa15.68■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Myl6bQ8CI43 207 aa15.68■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Kif17Q99PW8 1038 aa15.68■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Letm1Q9Z2I0 738 aa15.68■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Hoxb7P09024 217 aa15.68■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Bank1Q80VH0 783 aa15.68■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Cdr2P97817 455 aa15.68■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Tekt3Q6X6Z7 490 aa15.68■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Prpf40bQ80W14 870 aa15.68■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Cd274Q9EP73 290 aa15.68■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Zmym3Q9JLM4 1370 aa15.68■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Ift20Q61025 132 aa15.68■□□□□ 0.1
Col3a1-201ENSMUST00000087883 4933428M09RikQ9D3X3 192 aa15.68■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Speer4f2E9Q366 295 aa15.68■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Gnat2P50149 354 aa15.68■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Cct5P80316 541 aaKnown RBP15.68■□□□□ 0.1
Col3a1-201ENSMUST00000087883 SkiQ60698 725 aa15.68■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Hs6st3Q9QYK4 470 aa15.68■□□□□ 0.1
Col3a1-201ENSMUST00000087883 9230110C19RikQ8CC70 267 aa15.67■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Apbb1ipQ8R5A3 670 aa15.67■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Cyp27a1Q9DBG1 533 aa15.67■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Cct6bQ61390 531 aa15.67■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Abtb2Q7TQI7 1024 aa15.67■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Krt20Q9D312 431 aa15.67■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Ppp1r12cQ3UMT1 782 aa15.67■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Gm28047Q3US59 414 aa15.67■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Tekt2Q922G7 430 aa15.67■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Bicc1Q99MQ1 977 aaKnown RBP15.67■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Kcnh3Q9WVJ0 1095 aa15.67■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Mtmr7Q9Z2C9 660 aa15.67■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Palm3A2TJV2 734 aa15.67■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Abcb4P21440 1276 aa15.67■□□□□ 0.1
Col3a1-201ENSMUST00000087883 Rrp1P56183 494 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms