Protein–RNA interactions for Protein: Q8CC70

9230110C19Rik, RIKEN cDNA 9230110C19 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9230110C19RikQ8CC70 Gm25239-201ENSMUST00000174915 86 ntBASIC43.74■■■■■ 4.59
9230110C19RikQ8CC70 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.26■■■■■ 4.04
9230110C19RikQ8CC70 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
9230110C19RikQ8CC70 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.7■■■■□ 3.95
9230110C19RikQ8CC70 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
9230110C19RikQ8CC70 Gm15042-201ENSMUST00000120212 883 ntBASIC38.6■■■■□ 3.77
9230110C19RikQ8CC70 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38.39■■■■□ 3.74
9230110C19RikQ8CC70 Gm15045-201ENSMUST00000117359 883 ntBASIC37.84■■■■□ 3.65
9230110C19RikQ8CC70 Gm24109-201ENSMUST00000175489 103 ntBASIC37.75■■■■□ 3.63
9230110C19RikQ8CC70 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
9230110C19RikQ8CC70 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
9230110C19RikQ8CC70 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.87■■■■□ 3.49
9230110C19RikQ8CC70 Psd-208ENSMUST00000224556 2034 ntBASIC36.81■■■■□ 3.48
9230110C19RikQ8CC70 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC36.63■■■■□ 3.45
9230110C19RikQ8CC70 Gm23366-201ENSMUST00000175022 89 ntBASIC36.54■■■■□ 3.44
9230110C19RikQ8CC70 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.47■■■■□ 3.43
9230110C19RikQ8CC70 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36.39■■■■□ 3.42
9230110C19RikQ8CC70 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
9230110C19RikQ8CC70 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.41
9230110C19RikQ8CC70 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.15■■■■□ 3.38
9230110C19RikQ8CC70 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
9230110C19RikQ8CC70 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.97■■■■□ 3.35
9230110C19RikQ8CC70 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
9230110C19RikQ8CC70 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.89■■■■□ 3.34
9230110C19RikQ8CC70 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC35.79■■■■□ 3.32
9230110C19RikQ8CC70 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.72■■■■□ 3.31
9230110C19RikQ8CC70 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
9230110C19RikQ8CC70 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
9230110C19RikQ8CC70 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
9230110C19RikQ8CC70 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.51■■■■□ 3.27
9230110C19RikQ8CC70 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.43■■■■□ 3.26
9230110C19RikQ8CC70 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
9230110C19RikQ8CC70 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC35.22■■■■□ 3.23
9230110C19RikQ8CC70 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.1■■■■□ 3.21
9230110C19RikQ8CC70 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.93■■■■□ 3.18
9230110C19RikQ8CC70 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
9230110C19RikQ8CC70 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
9230110C19RikQ8CC70 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
9230110C19RikQ8CC70 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
9230110C19RikQ8CC70 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
9230110C19RikQ8CC70 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.56■■■■□ 3.12
9230110C19RikQ8CC70 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34.54■■■■□ 3.12
9230110C19RikQ8CC70 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
9230110C19RikQ8CC70 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
9230110C19RikQ8CC70 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
9230110C19RikQ8CC70 Gm25238-201ENSMUST00000174914 89 ntBASIC34.4■■■■□ 3.1
9230110C19RikQ8CC70 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
9230110C19RikQ8CC70 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34.33■■■■□ 3.09
9230110C19RikQ8CC70 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.27■■■■□ 3.08
9230110C19RikQ8CC70 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
9230110C19RikQ8CC70 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34.18■■■■□ 3.06
9230110C19RikQ8CC70 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
9230110C19RikQ8CC70 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
9230110C19RikQ8CC70 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
9230110C19RikQ8CC70 Gm10524-201ENSMUST00000181931 1893 ntBASIC34.01■■■■□ 3.03
9230110C19RikQ8CC70 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
9230110C19RikQ8CC70 Gm27325-201ENSMUST00000175467 74 ntBASIC33.89■■■■□ 3.02
9230110C19RikQ8CC70 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.8■■■■□ 3
9230110C19RikQ8CC70 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
9230110C19RikQ8CC70 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
9230110C19RikQ8CC70 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
9230110C19RikQ8CC70 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.7■■■□□ 2.99
9230110C19RikQ8CC70 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
9230110C19RikQ8CC70 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.69■■■□□ 2.98
9230110C19RikQ8CC70 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33.65■■■□□ 2.98
9230110C19RikQ8CC70 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.64■■■□□ 2.98
9230110C19RikQ8CC70 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33.52■■■□□ 2.96
9230110C19RikQ8CC70 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
9230110C19RikQ8CC70 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33.48■■■□□ 2.95
9230110C19RikQ8CC70 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33.48■■■□□ 2.95
9230110C19RikQ8CC70 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
9230110C19RikQ8CC70 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33.4■■■□□ 2.94
9230110C19RikQ8CC70 Gm42596-201ENSMUST00000196305 1958 ntBASIC33.4■■■□□ 2.94
9230110C19RikQ8CC70 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
9230110C19RikQ8CC70 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
9230110C19RikQ8CC70 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.34■■■□□ 2.93
9230110C19RikQ8CC70 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33.33■■■□□ 2.93
9230110C19RikQ8CC70 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.32■■■□□ 2.92
9230110C19RikQ8CC70 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
9230110C19RikQ8CC70 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.08■■■□□ 2.89
9230110C19RikQ8CC70 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
9230110C19RikQ8CC70 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.06■■■□□ 2.88
9230110C19RikQ8CC70 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
9230110C19RikQ8CC70 Rab21-202ENSMUST00000218831 843 ntBASIC33■■■□□ 2.87
9230110C19RikQ8CC70 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
9230110C19RikQ8CC70 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
9230110C19RikQ8CC70 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.84■■■□□ 2.85
9230110C19RikQ8CC70 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.8■■■□□ 2.84
9230110C19RikQ8CC70 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
9230110C19RikQ8CC70 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
9230110C19RikQ8CC70 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.71■■■□□ 2.83
9230110C19RikQ8CC70 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
9230110C19RikQ8CC70 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
9230110C19RikQ8CC70 Gm25262-201ENSMUST00000174934 133 ntBASIC32.7■■■□□ 2.83
9230110C19RikQ8CC70 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
9230110C19RikQ8CC70 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
9230110C19RikQ8CC70 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.68■■■□□ 2.82
9230110C19RikQ8CC70 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
9230110C19RikQ8CC70 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
9230110C19RikQ8CC70 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms