Protein–RNA interactions for Protein: Q8CB87

Rab44, Ras-related protein Rab-44, mousemouse

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab44Q8CB87 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34,56■■■■□ 3,12
Rab44Q8CB87 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33,28■■■□□ 2,92
Rab44Q8CB87 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33,15■■■□□ 2,9
Rab44Q8CB87 Gm25239-201ENSMUST00000174915 86 ntBASIC32,85■■■□□ 2,85
Rab44Q8CB87 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32,61■■■□□ 2,81
Rab44Q8CB87 Psd-208ENSMUST00000224556 2034 ntBASIC32,51■■■□□ 2,79
Rab44Q8CB87 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32,08■■■□□ 2,73
Rab44Q8CB87 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31,44■■■□□ 2,62
Rab44Q8CB87 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31,3■■■□□ 2,6
Rab44Q8CB87 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30,97■■■□□ 2,55
Rab44Q8CB87 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30,94■■■□□ 2,54
Rab44Q8CB87 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30,89■■■□□ 2,54
Rab44Q8CB87 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30,74■■■□□ 2,51
Rab44Q8CB87 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30,67■■■□□ 2,5
Rab44Q8CB87 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30,57■■■□□ 2,48
Rab44Q8CB87 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30,5■■■□□ 2,47
Rab44Q8CB87 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30,3■■■□□ 2,44
Rab44Q8CB87 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30,26■■■□□ 2,43
Rab44Q8CB87 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30,2■■■□□ 2,43
Rab44Q8CB87 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30,19■■■□□ 2,42
Rab44Q8CB87 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29,98■■■□□ 2,39
Rab44Q8CB87 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29,96■■■□□ 2,39
Rab44Q8CB87 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29,94■■■□□ 2,38
Rab44Q8CB87 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29,71■■■□□ 2,35
Rab44Q8CB87 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29,67■■■□□ 2,34
Rab44Q8CB87 Gm15042-201ENSMUST00000120212 883 ntBASIC29,63■■■□□ 2,33
Rab44Q8CB87 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29,55■■■□□ 2,32
Rab44Q8CB87 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29,55■■■□□ 2,32
Rab44Q8CB87 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29,52■■■□□ 2,32
Rab44Q8CB87 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29,37■■■□□ 2,29
Rab44Q8CB87 Gm42596-201ENSMUST00000196305 1958 ntBASIC29,28■■■□□ 2,28
Rab44Q8CB87 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29,26■■■□□ 2,28
Rab44Q8CB87 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29,24■■■□□ 2,27
Rab44Q8CB87 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29,18■■■□□ 2,26
Rab44Q8CB87 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29,17■■■□□ 2,26
Rab44Q8CB87 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29,15■■■□□ 2,26
Rab44Q8CB87 Gm15045-201ENSMUST00000117359 883 ntBASIC29,15■■■□□ 2,26
Rab44Q8CB87 Gm10524-201ENSMUST00000181931 1893 ntBASIC29,12■■■□□ 2,25
Rab44Q8CB87 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29,12■■■□□ 2,25
Rab44Q8CB87 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29,09■■■□□ 2,25
Rab44Q8CB87 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29,09■■■□□ 2,25
Rab44Q8CB87 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29,08■■■□□ 2,25
Rab44Q8CB87 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29,02■■■□□ 2,24
Rab44Q8CB87 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2,23
Rab44Q8CB87 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28,98■■■□□ 2,23
Rab44Q8CB87 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28,91■■■□□ 2,22
Rab44Q8CB87 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28,88■■■□□ 2,21
Rab44Q8CB87 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28,83■■■□□ 2,21
Rab44Q8CB87 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28,79■■■□□ 2,2
Rab44Q8CB87 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28,65■■■□□ 2,18
Rab44Q8CB87 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28,63■■■□□ 2,17
Rab44Q8CB87 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28,56■■■□□ 2,16
Rab44Q8CB87 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28,54■■■□□ 2,16
Rab44Q8CB87 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28,49■■■□□ 2,15
Rab44Q8CB87 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28,45■■■□□ 2,14
Rab44Q8CB87 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28,38■■■□□ 2,13
Rab44Q8CB87 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28,34■■■□□ 2,13
Rab44Q8CB87 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28,31■■■□□ 2,12
Rab44Q8CB87 Gm24109-201ENSMUST00000175489 103 ntBASIC28,31■■■□□ 2,12
Rab44Q8CB87 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28,29■■■□□ 2,12
Rab44Q8CB87 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28,28■■■□□ 2,12
Rab44Q8CB87 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28,22■■■□□ 2,11
Rab44Q8CB87 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28,22■■■□□ 2,11
Rab44Q8CB87 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28,21■■■□□ 2,11
Rab44Q8CB87 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28,18■■■□□ 2,1
Rab44Q8CB87 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28,18■■■□□ 2,1
Rab44Q8CB87 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28,14■■■□□ 2,1
Rab44Q8CB87 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28,12■■■□□ 2,09
Rab44Q8CB87 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28,11■■■□□ 2,09
Rab44Q8CB87 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28,07■■■□□ 2,08
Rab44Q8CB87 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28,07■■■□□ 2,08
Rab44Q8CB87 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28,01■■■□□ 2,07
Rab44Q8CB87 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2,07
Rab44Q8CB87 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27,92■■■□□ 2,06
Rab44Q8CB87 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27,89■■■□□ 2,06
Rab44Q8CB87 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27,83■■■□□ 2,05
Rab44Q8CB87 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27,78■■■□□ 2,04
Rab44Q8CB87 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27,76■■■□□ 2,04
Rab44Q8CB87 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27,75■■■□□ 2,03
Rab44Q8CB87 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27,75■■■□□ 2,03
Rab44Q8CB87 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27,74■■■□□ 2,03
Rab44Q8CB87 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27,72■■■□□ 2,03
Rab44Q8CB87 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27,69■■■□□ 2,02
Rab44Q8CB87 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27,68■■■□□ 2,02
Rab44Q8CB87 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27,63■■■□□ 2,01
Rab44Q8CB87 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27,59■■■□□ 2,01
Rab44Q8CB87 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27,55■■■□□ 2
Rab44Q8CB87 Gm23366-201ENSMUST00000175022 89 ntBASIC27,54■■■□□ 2
Rab44Q8CB87 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27,53■■■□□ 2
Rab44Q8CB87 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27,5■■□□□ 1,99
Rab44Q8CB87 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27,49■■□□□ 1,99
Rab44Q8CB87 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27,48■■□□□ 1,99
Rab44Q8CB87 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27,48■■□□□ 1,99
Rab44Q8CB87 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27,47■■□□□ 1,99
Rab44Q8CB87 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27,46■■□□□ 1,99
Rab44Q8CB87 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27,41■■□□□ 1,98
Rab44Q8CB87 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27,41■■□□□ 1,98
Rab44Q8CB87 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27,41■■□□□ 1,98
Rab44Q8CB87 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27,41■■□□□ 1,98
Rab44Q8CB87 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27,4■■□□□ 1,98
Retrieved 100 of 76,532 protein–RNA pairs in 10,2 ms