Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm25239-201ENSMUST00000174915 86 ntBASIC44.86■■■■■ 4.77
Prpf40bQ80W14 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC41.8■■■■■ 4.28
Prpf40bQ80W14 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41.14■■■■■ 4.18
Prpf40bQ80W14 Gm24109-201ENSMUST00000175489 103 ntBASIC39.24■■■■□ 3.87
Prpf40bQ80W14 Gm15042-201ENSMUST00000120212 883 ntBASIC38.54■■■■□ 3.76
Prpf40bQ80W14 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37.93■■■■□ 3.66
Prpf40bQ80W14 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.92■■■■□ 3.66
Prpf40bQ80W14 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.89■■■■□ 3.66
Prpf40bQ80W14 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
Prpf40bQ80W14 Gm15045-201ENSMUST00000117359 883 ntBASIC37.55■■■■□ 3.6
Prpf40bQ80W14 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
Prpf40bQ80W14 Gm23366-201ENSMUST00000175022 89 ntBASIC37.37■■■■□ 3.57
Prpf40bQ80W14 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.84■■■■□ 3.49
Prpf40bQ80W14 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
Prpf40bQ80W14 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.57■■■■□ 3.44
Prpf40bQ80W14 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.51■■■■□ 3.44
Prpf40bQ80W14 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
Prpf40bQ80W14 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36.41■■■■□ 3.42
Prpf40bQ80W14 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
Prpf40bQ80W14 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Prpf40bQ80W14 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
Prpf40bQ80W14 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.74■■■■□ 3.31
Prpf40bQ80W14 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35.69■■■■□ 3.3
Prpf40bQ80W14 Gm25238-201ENSMUST00000174914 89 ntBASIC35.63■■■■□ 3.29
Prpf40bQ80W14 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
Prpf40bQ80W14 Psd-208ENSMUST00000224556 2034 ntBASIC35.4■■■■□ 3.26
Prpf40bQ80W14 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Prpf40bQ80W14 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.86■■■■□ 3.17
Prpf40bQ80W14 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
Prpf40bQ80W14 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.72■■■■□ 3.15
Prpf40bQ80W14 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34.63■■■■□ 3.13
Prpf40bQ80W14 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
Prpf40bQ80W14 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.5■■■■□ 3.11
Prpf40bQ80W14 Gm25262-201ENSMUST00000174934 133 ntBASIC34.48■■■■□ 3.11
Prpf40bQ80W14 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Prpf40bQ80W14 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34.36■■■■□ 3.09
Prpf40bQ80W14 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34.3■■■■□ 3.08
Prpf40bQ80W14 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Prpf40bQ80W14 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Prpf40bQ80W14 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.12■■■■□ 3.05
Prpf40bQ80W14 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Prpf40bQ80W14 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34■■■■□ 3.03
Prpf40bQ80W14 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Prpf40bQ80W14 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.97■■■■□ 3.03
Prpf40bQ80W14 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33.97■■■■□ 3.03
Prpf40bQ80W14 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.97■■■■□ 3.03
Prpf40bQ80W14 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Prpf40bQ80W14 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.93■■■■□ 3.02
Prpf40bQ80W14 Gm26115-201ENSMUST00000175605 87 ntBASIC33.9■■■■□ 3.02
Prpf40bQ80W14 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.9■■■■□ 3.02
Prpf40bQ80W14 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Prpf40bQ80W14 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Prpf40bQ80W14 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.79■■■■□ 3
Prpf40bQ80W14 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Prpf40bQ80W14 Gm27325-201ENSMUST00000175467 74 ntBASIC33.64■■■□□ 2.98
Prpf40bQ80W14 Gm8109-201ENSMUST00000194076 746 ntBASIC33.63■■■□□ 2.97
Prpf40bQ80W14 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
Prpf40bQ80W14 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.6■■■□□ 2.97
Prpf40bQ80W14 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Prpf40bQ80W14 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.49■■■□□ 2.95
Prpf40bQ80W14 Rab21-202ENSMUST00000218831 843 ntBASIC33.48■■■□□ 2.95
Prpf40bQ80W14 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.46■■■□□ 2.95
Prpf40bQ80W14 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
Prpf40bQ80W14 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Prpf40bQ80W14 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
Prpf40bQ80W14 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Prpf40bQ80W14 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.09■■■□□ 2.89
Prpf40bQ80W14 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Prpf40bQ80W14 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.08■■■□□ 2.89
Prpf40bQ80W14 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33.05■■■□□ 2.88
Prpf40bQ80W14 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33.01■■■□□ 2.87
Prpf40bQ80W14 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.93■■■□□ 2.86
Prpf40bQ80W14 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Prpf40bQ80W14 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.84■■■□□ 2.85
Prpf40bQ80W14 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Prpf40bQ80W14 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Prpf40bQ80W14 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.73■■■□□ 2.83
Prpf40bQ80W14 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.72■■■□□ 2.83
Prpf40bQ80W14 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Prpf40bQ80W14 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Prpf40bQ80W14 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
Prpf40bQ80W14 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Prpf40bQ80W14 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Prpf40bQ80W14 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.55■■■□□ 2.8
Prpf40bQ80W14 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
Prpf40bQ80W14 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
Prpf40bQ80W14 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Prpf40bQ80W14 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.45■■■□□ 2.79
Prpf40bQ80W14 Gm24804-201ENSMUST00000174982 85 ntBASIC32.45■■■□□ 2.79
Prpf40bQ80W14 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Prpf40bQ80W14 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.41■■■□□ 2.78
Prpf40bQ80W14 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.4■■■□□ 2.78
Prpf40bQ80W14 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Prpf40bQ80W14 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Prpf40bQ80W14 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.18■■■□□ 2.74
Prpf40bQ80W14 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.17■■■□□ 2.74
Prpf40bQ80W14 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.15■■■□□ 2.74
Prpf40bQ80W14 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Prpf40bQ80W14 Gm27322-201ENSMUST00000184007 104 ntBASIC32.12■■■□□ 2.73
Prpf40bQ80W14 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms