RNA–Protein interactions for RNA: ENSMUST00000004507.10

Ddx56-201, Transcript of Probable ATP-dependent RNA helicase DDX56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx56, Length 1,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56-201ENSMUST00000004507 Pus3Q9JI38 481 aa13.33□□□□□ -0.28
Ddx56-201ENSMUST00000004507 1810065E05RikQ5NC41 235 aa13.32□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Arid3aQ62431 601 aa13.32□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Asap2Q7SIG6 958 aa13.32□□□□□ -0.28
Ddx56-201ENSMUST00000004507 BrapQ99MP8 591 aa13.32□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Ppil4Q9CXG3 492 aaKnown RBP13.32□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Dbndd1Q9CZ00 160 aa13.32□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Kif13bA0A286YCV9 1847 aa13.32□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Plcb3P51432 1234 aaKnown RBP13.32□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Csrnp1P59054 583 aa13.32□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Zfp317Q8C0Q5 607 aa13.32□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Sned1Q70E20 1403 aa13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Tpm3P21107 285 aaKnown RBP13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Exosc10P56960 887 aaKnown RBP13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Hspd1P63038 573 aaKnown RBP13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Zbtb38Q3LR78 1197 aa13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Nol10Q5RJG1 687 aaKnown RBP13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Oxsr1Q6P9R2 527 aa13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Plcd3Q8K2J0 785 aa13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Bicd2Q921C5 820 aa13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Mrpl44Q9CY73 333 aaKnown RBP13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Togaram1Q6A070 1776 aaKnown RBP13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Brpf3B2KF05 1204 aaKnown RBP13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Cfap58B2RW38 873 aa13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 1700113H08RikE9Q9Q5 327 aa13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Lnx1O70263 728 aa13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 AidaQ8C4Q6 305 aa13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Lmbrd2Q8C561 694 aa13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Atad2Q8CDM1 1040 aa13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Mtmr3Q8K296 1196 aa13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Rbm10Q99KG3 930 aaKnown RBP13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 DmtnQ9WV69 405 aa13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Foxo3Q9WVH4 672 aa13.31□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Usp42B2RQC2 1324 aaKnown RBP13.3□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Mctp1E9PV86 951 aa13.3□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Ncaph2Q8BSP2 607 aa13.3□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Col23a1Q8K4G2 532 aa13.3□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Ppp4r3bQ922R5 820 aa13.3□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Hmgn5Q9JL35 406 aa13.3□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Sh3bgrQ9WUZ7 214 aa13.3□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Myh7Q91Z83 1935 aa13.3□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Kdm3aQ6PCM1 1323 aa13.29□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Trim34bJ3QNR8 485 aa13.29□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Slc4a1P04919 929 aa13.29□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Usp28Q5I043 1051 aa13.29□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Rbm17Q8JZX4 405 aaKnown RBP13.29□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Pms1Q8K119 917 aa13.29□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Trim59Q922Y2 403 aa13.29□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Nfe2l3Q9WTM4 660 aa13.29□□□□□ -0.28
Ddx56-201ENSMUST00000004507 VirmaA2AIV2 1811 aaKnown RBP13.29□□□□□ -0.28
Ddx56-201ENSMUST00000004507 TnksQ6PFX9 1320 aa13.29□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Golgb1E9PVZ8 3238 aa13.29□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Hmx1O70218 332 aa13.29□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Bach1P97302 739 aa13.29□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Rab3gap1Q80UJ7 981 aa13.29□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Nop14Q8R3N1 860 aaKnown RBP13.29□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Rufy2Q8R4C2 606 aa13.29□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Wdr78E9PYY5 807 aa13.28□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Kif3aP28741 701 aa13.28□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Nucb2P81117 420 aa13.28□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Prom2Q3UUY6 835 aa13.28□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Ncbp1Q3UYV9 790 aaKnown RBP13.28□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Ltv1Q6NSQ7 470 aaKnown RBP13.28□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Pes1Q9EQ61 584 aaKnown RBP13.28□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Rgs9O54828 675 aa13.27□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Cct2P80314 535 aaKnown RBP13.27□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Tmem109Q3UBX0 243 aa13.27□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Fsd1Q7TPM6 496 aa13.27□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Kcnf1Q7TSH7 493 aa13.27□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Ttc14Q9CSP9 761 aa13.27□□□□□ -0.28
Ddx56-201ENSMUST00000004507 IncenpQ9WU62 880 aa13.27□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Carmil3Q3UFQ8 1375 aa13.27□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Ccdc112A0AUP1 442 aa13.27□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Eva1cP58659 440 aa13.27□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Itga6Q61739 1091 aa13.27□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Polr3gQ6NXY9 223 aa13.27□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Nxf7Q80SZ6 620 aaKnown RBP13.27□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Cdca8Q8BHX3 289 aa13.27□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Tmem67Q8BR76 992 aa13.27□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Rps6ka5Q8C050 863 aa13.27□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Emilin1Q99K41 1017 aa13.27□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Osbpl5Q9ER64 874 aa13.27□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Cyp3a57D3YYZ0 503 aa13.26□□□□□ -0.29
Ddx56-201ENSMUST00000004507 FosbP13346 338 aa13.26□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Wdhd1P59328 1117 aa13.26□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Ifit1Q64282 463 aa13.26□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Trim56Q80VI1 734 aaKnown RBP13.26□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Pknox2Q8BG99 474 aa13.26□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Inpp5bQ8K337 993 aa13.26□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Ncoa5Q91W39 579 aaKnown RBP13.26□□□□□ -0.29
Ddx56-201ENSMUST00000004507 4931408C20RikE9PWP9 1381 aa13.26□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Aox4Q3TYQ9 1336 aa13.26□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Cyp2d34L7N463 504 aa13.25□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Hap1O35668 628 aa13.25□□□□□ -0.29
Ddx56-201ENSMUST00000004507 TsksO54887 585 aa13.25□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Ptgs1P22437 602 aa13.25□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Spty2d1Q68FG3 682 aa13.25□□□□□ -0.29
Ddx56-201ENSMUST00000004507 ErfeQ6PGN1 340 aa13.25□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Ubxn4Q8VCH8 506 aa13.25□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Gja10Q9WUS4 505 aa13.25□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms