RNA–Protein interactions for RNA: ENSMUST00000004507.10

Ddx56-201, Transcript of Probable ATP-dependent RNA helicase DDX56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx56, Length 1,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56-201ENSMUST00000004507 Gm35339A0A140LHH9 1649 aa23.19■■□□□ 1.3
Ddx56-201ENSMUST00000004507 NischQ80TM9 1593 aa23.11■■□□□ 1.29
Ddx56-201ENSMUST00000004507 Abcc9P70170 1546 aa22.39■■□□□ 1.17
Ddx56-201ENSMUST00000004507 Abcc8B2RUS7 1588 aa22.2■■□□□ 1.14
Ddx56-201ENSMUST00000004507 ScribQ80U72 1612 aa21.18■□□□□ 0.98
Ddx56-201ENSMUST00000004507 Kdm5dQ62240 1548 aa20.57■□□□□ 0.88
Ddx56-201ENSMUST00000004507 NacadQ5SWP3 1504 aa20.53■□□□□ 0.88
Ddx56-201ENSMUST00000004507 Dcaf1Q80TR8 1506 aa20.51■□□□□ 0.87
Ddx56-201ENSMUST00000004507 Rhox8Q6VSS7 320 aa20.46■□□□□ 0.87
Ddx56-201ENSMUST00000004507 Rtl1Q7M732 1744 aa20.32■□□□□ 0.84
Ddx56-201ENSMUST00000004507 Rb1cc1Q9ESK9 1588 aa20.19■□□□□ 0.82
Ddx56-201ENSMUST00000004507 Sycp2Q9CUU3 1500 aa20.11■□□□□ 0.81
Ddx56-201ENSMUST00000004507 Ccdc180J3QNE4 1664 aa19.94■□□□□ 0.78
Ddx56-201ENSMUST00000004507 Baz1aO88379 1555 aa19.92■□□□□ 0.78
Ddx56-201ENSMUST00000004507 BicraF8VPZ9 1578 aa19.79■□□□□ 0.76
Ddx56-201ENSMUST00000004507 Crybg2B7ZCC2 1516 aa19.72■□□□□ 0.75
Ddx56-201ENSMUST00000004507 Zcchc6Q5BLK4 1491 aaKnown RBP19.59■□□□□ 0.73
Ddx56-201ENSMUST00000004507 Smarca2Q6DIC0 1577 aa19.38■□□□□ 0.69
Ddx56-201ENSMUST00000004507 Cecr2E9Q2Z1 1453 aa19.17■□□□□ 0.66
Ddx56-201ENSMUST00000004507 Ccdc136Q3TVA9 1136 aa19.1■□□□□ 0.65
Ddx56-201ENSMUST00000004507 Pds5bQ4VA53 1446 aaKnown RBP19.1■□□□□ 0.65
Ddx56-201ENSMUST00000004507 Smarca4Q3TKT4 1613 aaKnown RBP19.06■□□□□ 0.64
Ddx56-201ENSMUST00000004507 Atad2bE9Q166 1460 aaKnown RBP19.01■□□□□ 0.63
Ddx56-201ENSMUST00000004507 Iqgap2Q3UQ44 1575 aa18.9■□□□□ 0.62
Ddx56-201ENSMUST00000004507 Brd4Q9ESU6 1400 aaKnown RBP18.85■□□□□ 0.61
Ddx56-201ENSMUST00000004507 Synj1Q8CHC4 1574 aa18.82■□□□□ 0.6
Ddx56-201ENSMUST00000004507 HrcG5E8J6 738 aa18.81■□□□□ 0.6
Ddx56-201ENSMUST00000004507 Thoc2B1AZI6 1594 aaKnown RBP18.79■□□□□ 0.6
Ddx56-201ENSMUST00000004507 CftrP26361 1476 aa18.79■□□□□ 0.6
Ddx56-201ENSMUST00000004507 Cttnbp2B9EJA2 1648 aa18.76■□□□□ 0.59
Ddx56-201ENSMUST00000004507 Rpgrip1Q9EPQ2 1331 aa18.75■□□□□ 0.59
Ddx56-201ENSMUST00000004507 Trim41Q5NCC3 630 aa18.75■□□□□ 0.59
Ddx56-201ENSMUST00000004507 Ercc6F8VPZ5 1481 aa18.73■□□□□ 0.59
Ddx56-201ENSMUST00000004507 Wdr62Q3U3T8 1523 aa18.66■□□□□ 0.58
Ddx56-201ENSMUST00000004507 Dnajc5bQ9CQ94 199 aa18.64■□□□□ 0.58
Ddx56-201ENSMUST00000004507 Frmpd1A2AKB4 1549 aa18.64■□□□□ 0.57
Ddx56-201ENSMUST00000004507 Cc2d2aQ8CFW7 1633 aa18.55■□□□□ 0.56
Ddx56-201ENSMUST00000004507 Esf1Q3V1V3 845 aaKnown RBP18.53■□□□□ 0.56
Ddx56-201ENSMUST00000004507 Unc13aQ4KUS2 1712 aa18.47■□□□□ 0.55
Ddx56-201ENSMUST00000004507 Fam135aQ6NS59 1506 aa18.44■□□□□ 0.54
Ddx56-201ENSMUST00000004507 Acin1Q9JIX8 1338 aaKnown RBP18.42■□□□□ 0.54
Ddx56-201ENSMUST00000004507 Phldb1Q6PDH0 1371 aaKnown RBP18.41■□□□□ 0.54
Ddx56-201ENSMUST00000004507 Golga3P55937 1487 aa18.35■□□□□ 0.53
Ddx56-201ENSMUST00000004507 Cngb1E1AZ71 1325 aa18.34■□□□□ 0.53
Ddx56-201ENSMUST00000004507 Top2bQ64511 1612 aa18.3■□□□□ 0.52
Ddx56-201ENSMUST00000004507 Cep164Q5DU05 1446 aa18.29■□□□□ 0.52
Ddx56-201ENSMUST00000004507 Ubl4bQ9CQ84 188 aa18.26■□□□□ 0.51
Ddx56-201ENSMUST00000004507 Ehmt2Q9Z148 1263 aaKnown RBP18.19■□□□□ 0.5
Ddx56-201ENSMUST00000004507 Rsf1E9PWW9 1441 aaKnown RBP18.18■□□□□ 0.5
Ddx56-201ENSMUST00000004507 Baz1bQ9Z277 1479 aa18.15■□□□□ 0.5
Ddx56-201ENSMUST00000004507 Kif15Q6P9L6 1387 aa18.13■□□□□ 0.49
Ddx56-201ENSMUST00000004507 Lamc3Q9R0B6 1581 aa18.13■□□□□ 0.49
Ddx56-201ENSMUST00000004507 TnnQ80Z71 1560 aa18.06■□□□□ 0.48
Ddx56-201ENSMUST00000004507 Fmn1Q05860 1466 aa18.05■□□□□ 0.48
Ddx56-201ENSMUST00000004507 Mrc2Q64449 1479 aa18.03■□□□□ 0.48
Ddx56-201ENSMUST00000004507 Ccdc88bQ4QRL3 1481 aa18.02■□□□□ 0.48
Ddx56-201ENSMUST00000004507 Cux2P70298 1426 aa18.02■□□□□ 0.47
Ddx56-201ENSMUST00000004507 Chic1Q8CBW7 227 aa17.96■□□□□ 0.47
Ddx56-201ENSMUST00000004507 Il27Q8K3I6 234 aa17.88■□□□□ 0.45
Ddx56-201ENSMUST00000004507 Camsap1A2AHC3 1581 aa17.87■□□□□ 0.45
Ddx56-201ENSMUST00000004507 Ccdc18Q640L5 1455 aa17.87■□□□□ 0.45
Ddx56-201ENSMUST00000004507 Npm1Q61937 292 aaKnown RBP17.86■□□□□ 0.45
Ddx56-201ENSMUST00000004507 Kif21aQ9QXL2 1672 aa17.81■□□□□ 0.44
Ddx56-201ENSMUST00000004507 Top2aQ01320 1528 aaKnown RBP17.81■□□□□ 0.44
Ddx56-201ENSMUST00000004507 Gab3Q8BSM5 595 aa17.71■□□□□ 0.43
Ddx56-201ENSMUST00000004507 LrpprcQ6PB66 1392 aaKnown RBP17.71■□□□□ 0.43
Ddx56-201ENSMUST00000004507 Grin2bQ01097 1482 aa17.67■□□□□ 0.42
Ddx56-201ENSMUST00000004507 Dhx29Q6PGC1 1365 aaKnown RBP17.67■□□□□ 0.42
Ddx56-201ENSMUST00000004507 Lrriq1Q0P5X1 1673 aa17.65■□□□□ 0.42
Ddx56-201ENSMUST00000004507 PogzQ8BZH4 1409 aaKnown RBP17.63■□□□□ 0.41
Ddx56-201ENSMUST00000004507 Crocc2F6XLV1 1638 aa17.6■□□□□ 0.41
Ddx56-201ENSMUST00000004507 Pcgf6Q99NA9 353 aa17.59■□□□□ 0.41
Ddx56-201ENSMUST00000004507 Duox2A2AQ99 1517 aa17.58■□□□□ 0.4
Ddx56-201ENSMUST00000004507 NrkQ9R0G8 1455 aa17.57■□□□□ 0.4
Ddx56-201ENSMUST00000004507 PtprkP35822 1457 aa17.54■□□□□ 0.4
Ddx56-201ENSMUST00000004507 Plb1Q3TTY0 1478 aa17.53■□□□□ 0.4
Ddx56-201ENSMUST00000004507 Urb2E9Q7L1 1524 aaKnown RBP17.52■□□□□ 0.4
Ddx56-201ENSMUST00000004507 Shroom4Q1W617 1475 aa17.52■□□□□ 0.39
Ddx56-201ENSMUST00000004507 Efcab5A0JP43 1406 aa17.51■□□□□ 0.39
Ddx56-201ENSMUST00000004507 Samd9lQ69Z37 1561 aa17.47■□□□□ 0.39
Ddx56-201ENSMUST00000004507 Npm2Q80W85 207 aa17.47■□□□□ 0.39
Ddx56-201ENSMUST00000004507 Rapgef2Q8CHG7 1496 aa17.46■□□□□ 0.39
Ddx56-201ENSMUST00000004507 Eif4g3Q80XI3 1579 aaKnown RBP17.37■□□□□ 0.37
Ddx56-201ENSMUST00000004507 Ift140E9PY46 1464 aa17.37■□□□□ 0.37
Ddx56-201ENSMUST00000004507 NefmP08553 848 aa17.37■□□□□ 0.37
Ddx56-201ENSMUST00000004507 Zeb1Q64318 1117 aa17.36■□□□□ 0.37
Ddx56-201ENSMUST00000004507 Rad54l2Q99NG0 1466 aa17.35■□□□□ 0.37
Ddx56-201ENSMUST00000004507 Setd1bQ8CFT2 1985 aa17.34■□□□□ 0.37
Ddx56-201ENSMUST00000004507 Disp1Q3TDN0 1521 aa17.34■□□□□ 0.37
Ddx56-201ENSMUST00000004507 Cep162Q6ZQ06 1403 aa17.33■□□□□ 0.37
Ddx56-201ENSMUST00000004507 Mier1Q5UAK0 511 aa17.33■□□□□ 0.37
Ddx56-201ENSMUST00000004507 Eif4g1Q6NZJ6 1600 aaKnown RBP17.32■□□□□ 0.36
Ddx56-201ENSMUST00000004507 Supt5hO55201 1082 aaKnown RBP17.31■□□□□ 0.36
Ddx56-201ENSMUST00000004507 Mroh2bQ7M6Y6 1581 aa17.31■□□□□ 0.36
Ddx56-201ENSMUST00000004507 Arhgap35Q91YM2 1499 aa17.3■□□□□ 0.36
Ddx56-201ENSMUST00000004507 SynmQ70IV5 1561 aa17.3■□□□□ 0.36
Ddx56-201ENSMUST00000004507 Magi3Q9EQJ9 1476 aa17.26■□□□□ 0.35
Ddx56-201ENSMUST00000004507 Pbrm1Q8BSQ9 1634 aaKnown RBP17.26■□□□□ 0.35
Ddx56-201ENSMUST00000004507 Grin2aP35436 1464 aa17.25■□□□□ 0.35
Ddx56-201ENSMUST00000004507 Myt1lP97500 1187 aa17.25■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms