RNA–Protein interactions for RNA: ENSMUST00000131537.8

Lig3-204, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-204ENSMUST00000131537 Slc38a1Q8K2P7 485 aa17.14■□□□□ 0.33
Lig3-204ENSMUST00000131537 Tmed9Q99KF1 235 aaKnown RBP17.14■□□□□ 0.33
Lig3-204ENSMUST00000131537 Serpinb11Q9CQV3 388 aa17.14■□□□□ 0.33
Lig3-204ENSMUST00000131537 Tomm20Q9DCC8 145 aa17.14■□□□□ 0.33
Lig3-204ENSMUST00000131537 Fzr1Q9R1K5 493 aa17.14■□□□□ 0.33
Lig3-204ENSMUST00000131537 Rgs6Q9Z2H2 472 aa17.14■□□□□ 0.33
Lig3-204ENSMUST00000131537 Muc2Q80Z19 2680 aa17.14■□□□□ 0.33
Lig3-204ENSMUST00000131537 Gm9925F6T2U3 160 aa17.13■□□□□ 0.33
Lig3-204ENSMUST00000131537 Lbhd2G3UW55 114 aa17.13■□□□□ 0.33
Lig3-204ENSMUST00000131537 Fcn1O70165 334 aa17.13■□□□□ 0.33
Lig3-204ENSMUST00000131537 Tmem14aP56983 99 aa17.13■□□□□ 0.33
Lig3-204ENSMUST00000131537 Olfr142Q60881 305 aa17.13■□□□□ 0.33
Lig3-204ENSMUST00000131537 Nxph2Q61199 261 aa17.13■□□□□ 0.33
Lig3-204ENSMUST00000131537 Pou4f3Q63955 338 aa17.13■□□□□ 0.33
Lig3-204ENSMUST00000131537 Ranbp3lQ6PDH4 491 aa17.13■□□□□ 0.33
Lig3-204ENSMUST00000131537 JkampQ8BI36 311 aa17.13■□□□□ 0.33
Lig3-204ENSMUST00000131537 Fyttd1Q91Z49 317 aaKnown RBP17.13■□□□□ 0.33
Lig3-204ENSMUST00000131537 Mob1aQ921Y0 216 aa17.13■□□□□ 0.33
Lig3-204ENSMUST00000131537 Il24Q925S4 181 aa17.13■□□□□ 0.33
Lig3-204ENSMUST00000131537 Sp5Q9JHX2 398 aa17.13■□□□□ 0.33
Lig3-204ENSMUST00000131537 Abca12E9Q876 2595 aa17.13■□□□□ 0.33
Lig3-204ENSMUST00000131537 Olfr172E9Q8F6 309 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Vmn1r7E9Q8T0 311 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Olfr178E9Q9T3 319 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Cxcl13O55038 109 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Kcnj1O88335 372 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 P18526 117 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 B3gat2P59270 324 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Rps25P62852 125 aaKnown RBP17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Il18P70380 192 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Otx1P80205 355 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Mpzl1Q3TEW6 270 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 C1ql2Q8CFR0 287 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Olfr780Q8VEU0 312 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Olfr1453Q8VFX0 307 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 ClpxQ9JHS4 634 aaKnown RBP17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Dnaja4Q9JMC3 397 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Ttc28Q80XJ3 2450 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Gm21854A0A087WNM4 232 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Gm10778A0A087WNP5 499 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Prdm13E9PZZ1 754 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Casp6O08738 276 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Hoxb6P09023 224 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Cox6a1P43024 111 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Sf3b6P59708 125 aaKnown RBP17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Rasd2P63032 266 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Tubg1P83887 451 aaKnown RBP17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Anxa11P97384 503 aaKnown RBP17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Kbtbd8Q3UQV5 599 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 AY761185Q5ERI8 94 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Pan3Q640Q5 837 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Olfr94Q6UAH0 386 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Cml2Q8CHQ9 238 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Rab15Q8K386 212 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Nsun5Q8K4F6 465 aaKnown RBP17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Sfxn5Q925N0 342 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Hspb11Q9D6H2 143 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Elp4Q9ER73 422 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Adgrg4B7ZCC9 3073 aa17.12■□□□□ 0.33
Lig3-204ENSMUST00000131537 Lrrc29A0A1B0GQY9 621 aa17.11■□□□□ 0.33
Lig3-204ENSMUST00000131537 Scml2B1AVB3 969 aa17.11■□□□□ 0.33
Lig3-204ENSMUST00000131537 Gm6614M0QWR8 670 aa17.11■□□□□ 0.33
Lig3-204ENSMUST00000131537 Ogg1O08760 345 aa17.11■□□□□ 0.33
Lig3-204ENSMUST00000131537 Nrg3O35181 713 aa17.11■□□□□ 0.33
Lig3-204ENSMUST00000131537 SgcdP82347 289 aa17.11■□□□□ 0.33
Lig3-204ENSMUST00000131537 Pax8Q00288 457 aa17.11■□□□□ 0.33
Lig3-204ENSMUST00000131537 H2-T22Q31615 379 aa17.11■□□□□ 0.33
Lig3-204ENSMUST00000131537 Znf691Q3TDE8 283 aa17.11■□□□□ 0.33
Lig3-204ENSMUST00000131537 Cd96Q3U0X8 602 aa17.11■□□□□ 0.33
Lig3-204ENSMUST00000131537 PcolceQ61398 468 aa17.11■□□□□ 0.33
Lig3-204ENSMUST00000131537 Lsm10Q8QZX5 122 aa17.11■□□□□ 0.33
Lig3-204ENSMUST00000131537 Ccm2lQ8VCC6 481 aa17.11■□□□□ 0.33
Lig3-204ENSMUST00000131537 Olfr1138Q8VFQ9 311 aa17.11■□□□□ 0.33
Lig3-204ENSMUST00000131537 Thyn1Q91YJ3 226 aa17.11■□□□□ 0.33
Lig3-204ENSMUST00000131537 Taf11Q99JX1 211 aa17.11■□□□□ 0.33
Lig3-204ENSMUST00000131537 Rpl22l1Q9D7S7 122 aaKnown RBP17.11■□□□□ 0.33
Lig3-204ENSMUST00000131537 Ndufaf3Q9JKL4 185 aa17.11■□□□□ 0.33
Lig3-204ENSMUST00000131537 Sdk1Q3UH53 2193 aa17.11■□□□□ 0.33
Lig3-204ENSMUST00000131537 OtoglF7A4A7 2325 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 Igkv14-100A0A0G2JG36 117 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 Gm21800J3QMJ9 180 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 Matn3O35701 481 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 Wnt2bO70283 389 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 Hsd17b12O70503 312 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 Sstr2P30875 369 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 Serpinf1P97298 417 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 Prop1P97458 223 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 Olfr1131Q7TR45 309 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 Swi5Q8K3D3 89 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 Mterf3Q8R3J4 412 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 Basp1Q91XV3 226 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 Scrt1Q99M85 348 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 Kcnmb2Q9CZM9 235 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 Tmem269Q9D4Y8 254 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 Ak3Q9WTP7 227 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 Gm8225D3Z536 292 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 Vmn2r66K7N6R9 851 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 P04945 108 aa17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 UbcP0CG50 734 aaKnown RBP17.1■□□□□ 0.33
Lig3-204ENSMUST00000131537 Atp5j2P56135 88 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 52 ms