Protein–RNA interactions for Protein: Q6PDH4

Ranbp3l, Ran-binding protein 3-like, mousemouse

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ranbp3lQ6PDH4 Gm25239-201ENSMUST00000174915 86 ntBASIC31.1■■■□□ 2.57
Ranbp3lQ6PDH4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ranbp3lQ6PDH4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ranbp3lQ6PDH4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
Ranbp3lQ6PDH4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Ranbp3lQ6PDH4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ranbp3lQ6PDH4 Psd-208ENSMUST00000224556 2034 ntBASIC28.29■■■□□ 2.12
Ranbp3lQ6PDH4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ranbp3lQ6PDH4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Ranbp3lQ6PDH4 Gm15042-201ENSMUST00000120212 883 ntBASIC27.83■■■□□ 2.05
Ranbp3lQ6PDH4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Ranbp3lQ6PDH4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ranbp3lQ6PDH4 Gm15045-201ENSMUST00000117359 883 ntBASIC27.31■■□□□ 1.96
Ranbp3lQ6PDH4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ranbp3lQ6PDH4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.12■■□□□ 1.93
Ranbp3lQ6PDH4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ranbp3lQ6PDH4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ranbp3lQ6PDH4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ranbp3lQ6PDH4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ranbp3lQ6PDH4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ranbp3lQ6PDH4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ranbp3lQ6PDH4 Gm24109-201ENSMUST00000175489 103 ntBASIC26.67■■□□□ 1.86
Ranbp3lQ6PDH4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ranbp3lQ6PDH4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ranbp3lQ6PDH4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ranbp3lQ6PDH4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ranbp3lQ6PDH4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ranbp3lQ6PDH4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Ranbp3lQ6PDH4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.38■■□□□ 1.81
Ranbp3lQ6PDH4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ranbp3lQ6PDH4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ranbp3lQ6PDH4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ranbp3lQ6PDH4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Ranbp3lQ6PDH4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.16■■□□□ 1.78
Ranbp3lQ6PDH4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ranbp3lQ6PDH4 Gm23366-201ENSMUST00000175022 89 ntBASIC26.09■■□□□ 1.77
Ranbp3lQ6PDH4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ranbp3lQ6PDH4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ranbp3lQ6PDH4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Ranbp3lQ6PDH4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Ranbp3lQ6PDH4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ranbp3lQ6PDH4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ranbp3lQ6PDH4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ranbp3lQ6PDH4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ranbp3lQ6PDH4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.73■■□□□ 1.71
Ranbp3lQ6PDH4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.67■■□□□ 1.7
Ranbp3lQ6PDH4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.61■■□□□ 1.69
Ranbp3lQ6PDH4 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.6■■□□□ 1.69
Ranbp3lQ6PDH4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ranbp3lQ6PDH4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Ranbp3lQ6PDH4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.53■■□□□ 1.68
Ranbp3lQ6PDH4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ranbp3lQ6PDH4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ranbp3lQ6PDH4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Ranbp3lQ6PDH4 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.45■■□□□ 1.66
Ranbp3lQ6PDH4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ranbp3lQ6PDH4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ranbp3lQ6PDH4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ranbp3lQ6PDH4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ranbp3lQ6PDH4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ranbp3lQ6PDH4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ranbp3lQ6PDH4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Ranbp3lQ6PDH4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Ranbp3lQ6PDH4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ranbp3lQ6PDH4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.97■■□□□ 1.59
Ranbp3lQ6PDH4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ranbp3lQ6PDH4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ranbp3lQ6PDH4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ranbp3lQ6PDH4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ranbp3lQ6PDH4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ranbp3lQ6PDH4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Ranbp3lQ6PDH4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ranbp3lQ6PDH4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.74■■□□□ 1.55
Ranbp3lQ6PDH4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Ranbp3lQ6PDH4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ranbp3lQ6PDH4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ranbp3lQ6PDH4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.59■■□□□ 1.53
Ranbp3lQ6PDH4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.58■■□□□ 1.52
Ranbp3lQ6PDH4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ranbp3lQ6PDH4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ranbp3lQ6PDH4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ranbp3lQ6PDH4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ranbp3lQ6PDH4 Gm27325-201ENSMUST00000175467 74 ntBASIC24.49■■□□□ 1.51
Ranbp3lQ6PDH4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ranbp3lQ6PDH4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Ranbp3lQ6PDH4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Ranbp3lQ6PDH4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Ranbp3lQ6PDH4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ranbp3lQ6PDH4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ranbp3lQ6PDH4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ranbp3lQ6PDH4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ranbp3lQ6PDH4 Gm25238-201ENSMUST00000174914 89 ntBASIC24.33■■□□□ 1.49
Ranbp3lQ6PDH4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ranbp3lQ6PDH4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.29■■□□□ 1.48
Ranbp3lQ6PDH4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
Ranbp3lQ6PDH4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ranbp3lQ6PDH4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ranbp3lQ6PDH4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ranbp3lQ6PDH4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Ranbp3lQ6PDH4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.21■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 155.3 ms