Protein–RNA interactions for Protein: O88335

Kcnj1, ATP-sensitive inward rectifier potassium channel 1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnj1O88335 Gm25239-201ENSMUST00000174915 86 ntBASIC31.74■■■□□ 2.67
Kcnj1O88335 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Kcnj1O88335 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Kcnj1O88335 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Kcnj1O88335 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Kcnj1O88335 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
Kcnj1O88335 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Kcnj1O88335 Psd-208ENSMUST00000224556 2034 ntBASIC28.77■■■□□ 2.2
Kcnj1O88335 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Kcnj1O88335 Gm15042-201ENSMUST00000120212 883 ntBASIC28.15■■■□□ 2.1
Kcnj1O88335 Gm15045-201ENSMUST00000117359 883 ntBASIC27.57■■■□□ 2
Kcnj1O88335 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Kcnj1O88335 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Kcnj1O88335 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Kcnj1O88335 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Kcnj1O88335 Gm24109-201ENSMUST00000175489 103 ntBASIC27.29■■□□□ 1.96
Kcnj1O88335 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Kcnj1O88335 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Kcnj1O88335 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Kcnj1O88335 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Kcnj1O88335 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Kcnj1O88335 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27■■□□□ 1.91
Kcnj1O88335 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Kcnj1O88335 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Kcnj1O88335 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.9■■□□□ 1.9
Kcnj1O88335 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Kcnj1O88335 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Kcnj1O88335 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Kcnj1O88335 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Kcnj1O88335 Gm23366-201ENSMUST00000175022 89 ntBASIC26.6■■□□□ 1.85
Kcnj1O88335 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Kcnj1O88335 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Kcnj1O88335 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Kcnj1O88335 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Kcnj1O88335 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Kcnj1O88335 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Kcnj1O88335 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.37■■□□□ 1.81
Kcnj1O88335 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Kcnj1O88335 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Kcnj1O88335 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Kcnj1O88335 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Kcnj1O88335 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.22■■□□□ 1.79
Kcnj1O88335 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Kcnj1O88335 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.17■■□□□ 1.78
Kcnj1O88335 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Kcnj1O88335 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Kcnj1O88335 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Kcnj1O88335 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Kcnj1O88335 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.93■■□□□ 1.74
Kcnj1O88335 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Kcnj1O88335 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.85■■□□□ 1.73
Kcnj1O88335 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.85■■□□□ 1.73
Kcnj1O88335 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
Kcnj1O88335 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Kcnj1O88335 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Kcnj1O88335 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Kcnj1O88335 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Kcnj1O88335 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.49■■□□□ 1.67
Kcnj1O88335 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Kcnj1O88335 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Kcnj1O88335 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Kcnj1O88335 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Kcnj1O88335 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Kcnj1O88335 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Kcnj1O88335 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.22■■□□□ 1.63
Kcnj1O88335 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.22■■□□□ 1.63
Kcnj1O88335 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Kcnj1O88335 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Kcnj1O88335 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Kcnj1O88335 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Kcnj1O88335 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Kcnj1O88335 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Kcnj1O88335 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Kcnj1O88335 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.03■■□□□ 1.6
Kcnj1O88335 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Kcnj1O88335 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
Kcnj1O88335 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.99■■□□□ 1.59
Kcnj1O88335 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Kcnj1O88335 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Kcnj1O88335 Gm25238-201ENSMUST00000174914 89 ntBASIC24.91■■□□□ 1.58
Kcnj1O88335 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.9■■□□□ 1.58
Kcnj1O88335 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Kcnj1O88335 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Kcnj1O88335 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Kcnj1O88335 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
Kcnj1O88335 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Kcnj1O88335 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.84■■□□□ 1.57
Kcnj1O88335 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Kcnj1O88335 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Kcnj1O88335 Gm27325-201ENSMUST00000175467 74 ntBASIC24.75■■□□□ 1.55
Kcnj1O88335 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Kcnj1O88335 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Kcnj1O88335 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Kcnj1O88335 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Kcnj1O88335 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.69■■□□□ 1.54
Kcnj1O88335 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Kcnj1O88335 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.67■■□□□ 1.54
Kcnj1O88335 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Kcnj1O88335 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Kcnj1O88335 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.66■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms