RNA–Protein interactions for RNA: YPR029C

APL4, Transcript of Gamma-adaptin, yeast

Gene APL4, Length 2,499 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL4	YPR029C	DOA4	P32571	926 aa		3.98	□□□□□ -1.77
APL4	YPR029C	SUR1	P33300	382 aa		3.98	□□□□□ -1.77
APL4	YPR029C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
APL4	YPR029C	EFM2	P38347	419 aa		3.98	□□□□□ -1.77
APL4	YPR029C	XDJ1	P39102	459 aa		3.98	□□□□□ -1.77
APL4	YPR029C	YEL023C	P39992	682 aa		3.98	□□□□□ -1.77
APL4	YPR029C	OSW5	P40219	148 aa		3.98	□□□□□ -1.77
APL4	YPR029C	UBP6	P43593	499 aa	Known RBP	3.98	□□□□□ -1.77
APL4	YPR029C	MET12	P46151	657 aa		3.98	□□□□□ -1.77
APL4	YPR029C	SAP4	P53036	818 aa		3.98	□□□□□ -1.77
APL4	YPR029C	MLC1	P53141	149 aa		3.98	□□□□□ -1.77
APL4	YPR029C	YGR054W	P53235	642 aa	Known RBP	3.98	□□□□□ -1.77
APL4	YPR029C	ART5	P53244	586 aa	Known RBP	3.98	□□□□□ -1.77
APL4	YPR029C	CBK1	P53894	756 aa		3.98	□□□□□ -1.77
APL4	YPR029C	ENA2	Q01896	1091 aa		3.98	□□□□□ -1.77
APL4	YPR029C	MRPL13	Q02204	264 aa		3.98	□□□□□ -1.77
APL4	YPR029C	TOF2	Q02208	771 aa		3.98	□□□□□ -1.77
APL4	YPR029C	OAZ1	Q02803	292 aa		3.98	□□□□□ -1.77
APL4	YPR029C	GYL1	Q04322	720 aa		3.98	□□□□□ -1.77
APL4	YPR029C	RSF1	Q05043	376 aa		3.98	□□□□□ -1.77
APL4	YPR029C	ARR1	Q06596	294 aa		3.98	□□□□□ -1.77
APL4	YPR029C	YDL206W	Q12424	762 aa		3.98	□□□□□ -1.77
APL4	YPR029C	ENA5	Q12691	1091 aa		3.98	□□□□□ -1.77
APL4	YPR029C	GCN4	P03069	281 aa		3.97	□□□□□ -1.77
APL4	YPR029C	FLP1	P03870	423 aa		3.97	□□□□□ -1.77
APL4	YPR029C	MET17	P06106	444 aa		3.97	□□□□□ -1.77
APL4	YPR029C	DBP2	P24783	546 aa	Known RBP	3.97	□□□□□ -1.77
APL4	YPR029C	SGF29	P25554	259 aa		3.97	□□□□□ -1.77
APL4	YPR029C	RPC82	P32349	654 aa		3.97	□□□□□ -1.77
APL4	YPR029C	SIF2	P38262	535 aa		3.97	□□□□□ -1.77
APL4	YPR029C	APM2	P38700	605 aa		3.97	□□□□□ -1.77
APL4	YPR029C	YHB1	P39676	399 aa	Known RBP	3.97	□□□□□ -1.77
APL4	YPR029C	NOP9	P47077	666 aa	Known RBP	3.97	□□□□□ -1.77
APL4	YPR029C	GNP1	P48813	663 aa		3.97	□□□□□ -1.77
APL4	YPR029C	VBA4	Q04602	768 aa	Known RBP	3.97	□□□□□ -1.77
APL4	YPR029C	SPH1	Q06160	661 aa		3.97	□□□□□ -1.77
APL4	YPR029C	SLK19	Q08581	821 aa	Known RBP	3.97	□□□□□ -1.77
APL4	YPR029C	YPR027C	Q12079	277 aa		3.97	□□□□□ -1.77
APL4	YPR029C	YVC1	Q12324	675 aa		3.97	□□□□□ -1.77
APL4	YPR029C	RTN2	Q12443	393 aa		3.97	□□□□□ -1.77
APL4	YPR029C	FUM1	P08417	488 aa	Known RBP	3.97	□□□□□ -1.77
APL4	YPR029C	BIK1	P11709	440 aa		3.97	□□□□□ -1.77
APL4	YPR029C	TOP3	P13099	656 aa		3.97	□□□□□ -1.77
APL4	YPR029C	MRPL33	P20084	86 aa		3.97	□□□□□ -1.77
APL4	YPR029C	ITR1	P30605	584 aa		3.97	□□□□□ -1.77
APL4	YPR029C	RME1	P32338	300 aa	Known RBP	3.97	□□□□□ -1.77
APL4	YPR029C	YEL043W	P32618	956 aa		3.97	□□□□□ -1.77
APL4	YPR029C	APE3	P37302	537 aa	Known RBP	3.97	□□□□□ -1.77
APL4	YPR029C	PCH2	P38126	564 aa		3.97	□□□□□ -1.77
APL4	YPR029C	YSW1	P38280	609 aa		3.97	□□□□□ -1.77
APL4	YPR029C	COS111	P38308	924 aa		3.97	□□□□□ -1.77
APL4	YPR029C	AXL2	P38928	823 aa		3.97	□□□□□ -1.77
APL4	YPR029C	NPR2	P39923	615 aa		3.97	□□□□□ -1.77
APL4	YPR029C	YIR014W	P40570	242 aa		3.97	□□□□□ -1.77
APL4	YPR029C	ALG2	P43636	503 aa		3.97	□□□□□ -1.77
APL4	YPR029C	ASK10	P48361	1146 aa		3.97	□□□□□ -1.77
APL4	YPR029C	YBP2	P53169	641 aa		3.97	□□□□□ -1.77
APL4	YPR029C	SNF12	P53628	566 aa		3.97	□□□□□ -1.77
APL4	YPR029C	TOF1	P53840	1238 aa		3.97	□□□□□ -1.77
APL4	YPR029C	CEG1	Q01159	459 aa	Predicted RBP	3.97	□□□□□ -1.77
APL4	YPR029C	PML39	Q03760	334 aa		3.97	□□□□□ -1.77
APL4	YPR029C	HLR1	Q04429	423 aa		3.97	□□□□□ -1.77
APL4	YPR029C	AIM32	Q04689	311 aa		3.97	□□□□□ -1.77
APL4	YPR029C	VID22	Q05934	901 aa		3.97	□□□□□ -1.77
APL4	YPR029C	ISR1	Q06098	443 aa	Known RBP	3.97	□□□□□ -1.77
APL4	YPR029C	RPN7	Q06103	429 aa	Known RBP	3.97	□□□□□ -1.77
APL4	YPR029C	SEC3	P33332	1336 aa	Known RBP	3.97	□□□□□ -1.77
APL4	YPR029C	CPA2	P03965	1118 aa	Known RBP	3.96	□□□□□ -1.78
APL4	YPR029C	ARG3	P05150	338 aa		3.96	□□□□□ -1.78
APL4	YPR029C	NUC1	P08466	329 aa		3.96	□□□□□ -1.78
APL4	YPR029C	MTF2	P10849	440 aa		3.96	□□□□□ -1.78
APL4	YPR029C	DBP3	P20447	523 aa	Known RBP	3.96	□□□□□ -1.78
APL4	YPR029C	HCA4	P20448	770 aa	Known RBP	3.96	□□□□□ -1.78
APL4	YPR029C	OLE1	P21147	510 aa	Known RBP	3.96	□□□□□ -1.78
APL4	YPR029C	MIH1	P23748	554 aa		3.96	□□□□□ -1.78
APL4	YPR029C	PRD1	P25375	712 aa		3.96	□□□□□ -1.78
APL4	YPR029C	IRE1	P32361	1115 aa		3.96	□□□□□ -1.78
APL4	YPR029C	HIR2	P32480	875 aa		3.96	□□□□□ -1.78
APL4	YPR029C	UGA4	P32837	571 aa		3.96	□□□□□ -1.78
APL4	YPR029C	LTV1	P34078	463 aa		3.96	□□□□□ -1.78
APL4	YPR029C	SET3	P36124	751 aa		3.96	□□□□□ -1.78
APL4	YPR029C	PXL1	P36166	706 aa		3.96	□□□□□ -1.78
APL4	YPR029C	MRPL40	P36534	297 aa		3.96	□□□□□ -1.78
APL4	YPR029C	TAF5	P38129	798 aa		3.96	□□□□□ -1.78
APL4	YPR029C	RRM3	P38766	723 aa		3.96	□□□□□ -1.78
APL4	YPR029C	MMM1	P41800	426 aa		3.96	□□□□□ -1.78
APL4	YPR029C	STU2	P46675	888 aa		3.96	□□□□□ -1.78
APL4	YPR029C	HFM1	P51979	1187 aa		3.96	□□□□□ -1.78
APL4	YPR029C	SSL2	Q00578	843 aa		3.96	□□□□□ -1.78
APL4	YPR029C	RPT6	Q01939	405 aa	Known RBP	3.96	□□□□□ -1.78
APL4	YPR029C	EGD1	Q02642	157 aa	Known RBP	3.96	□□□□□ -1.78
APL4	YPR029C	HOS3	Q02959	697 aa	Known RBP	3.96	□□□□□ -1.78
APL4	YPR029C	YAP6	Q03935	383 aa		3.96	□□□□□ -1.78
APL4	YPR029C	GIS4	Q04233	774 aa		3.96	□□□□□ -1.78
APL4	YPR029C	CIR2	Q08822	631 aa		3.96	□□□□□ -1.78
APL4	YPR029C	BUG1	Q12191	341 aa		3.96	□□□□□ -1.78
APL4	YPR029C	HER1	Q12276	1246 aa		3.96	□□□□□ -1.78
APL4	YPR029C	AHC1	Q12433	566 aa		3.96	□□□□□ -1.78
APL4	YPR029C	PFK27	Q12471	397 aa	Predicted RBP	3.96	□□□□□ -1.78
APL4	YPR029C	CDC19	P00549	500 aa	Known RBP	3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms