RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C YPL277CQ08989 487 aa10.12□□□□□ -0.79
SSN3YPL042C PCK1P10963 549 aa10.11□□□□□ -0.79
SSN3YPL042C TRK2P28584 889 aa10.11□□□□□ -0.79
SSN3YPL042C TVP38P36164 337 aa10.11□□□□□ -0.79
SSN3YPL042C DSN1P40568 576 aa10.11□□□□□ -0.79
SSN3YPL042C AGX1P43567 385 aa10.11□□□□□ -0.79
SSN3YPL042C YJL055WP47044 245 aa10.11□□□□□ -0.79
SSN3YPL042C TOF1P53840 1238 aa10.11□□□□□ -0.79
SSN3YPL042C NCS2P53923 493 aaPredicted RBP10.11□□□□□ -0.79
SSN3YPL042C YDL073WQ07454 984 aa10.11□□□□□ -0.79
SSN3YPL042C MED1Q12321 566 aa10.11□□□□□ -0.79
SSN3YPL042C MPD2Q99316 277 aa10.11□□□□□ -0.79
SSN3YPL042C RPC25P35718 212 aa10.1□□□□□ -0.79
SSN3YPL042C RET2P43621 546 aa10.1□□□□□ -0.79
SSN3YPL042C ARK1P53974 638 aa10.1□□□□□ -0.79
SSN3YPL042C CUR1Q06469 252 aa10.1□□□□□ -0.79
SSN3YPL042C YEL077CQ3E7X8 1277 aa10.1□□□□□ -0.79
SSN3YPL042C DAL7P21826 554 aa10.09□□□□□ -0.79
SSN3YPL042C RPC53P25441 422 aa10.09□□□□□ -0.79
SSN3YPL042C RGT1P32862 1170 aa10.09□□□□□ -0.79
SSN3YPL042C RTT107P38850 1070 aa10.09□□□□□ -0.79
SSN3YPL042C UBP5P39944 805 aa10.09□□□□□ -0.79
SSN3YPL042C TMN3P40071 706 aa10.09□□□□□ -0.79
SSN3YPL042C HAS1Q03532 505 aaKnown RBP10.09□□□□□ -0.79
SSN3YPL042C RTC5Q12108 567 aaKnown RBP10.09□□□□□ -0.79
SSN3YPL042C TIF6Q12522 245 aaKnown RBP10.09□□□□□ -0.79
SSN3YPL042C SEC15P22224 910 aa10.09□□□□□ -0.79
SSN3YPL042C CDC48P25694 835 aaKnown RBP10.09□□□□□ -0.79
SSN3YPL042C YUR1P26725 428 aa10.09□□□□□ -0.79
SSN3YPL042C YEL1P34225 687 aa10.09□□□□□ -0.79
SSN3YPL042C MNR2P35724 969 aa10.09□□□□□ -0.79
SSN3YPL042C SLX1P38324 304 aa10.09□□□□□ -0.79
SSN3YPL042C YJL070CP40361 888 aa10.09□□□□□ -0.79
SSN3YPL042C IML2P47031 731 aa10.09□□□□□ -0.79
SSN3YPL042C NSE5Q03718 556 aa10.09□□□□□ -0.79
SSN3YPL042C YLR225CQ05948 407 aaKnown RBP10.09□□□□□ -0.79
SSN3YPL042C SPO75Q07798 868 aa10.09□□□□□ -0.79
SSN3YPL042C DBP5P20449 482 aaKnown RBP10.08□□□□□ -0.8
SSN3YPL042C RIM11P38615 370 aa10.08□□□□□ -0.8
SSN3YPL042C MAD1P40957 749 aa10.08□□□□□ -0.8
SSN3YPL042C HFM1P51979 1187 aa10.08□□□□□ -0.8
SSN3YPL042C SMC5Q08204 1093 aa10.08□□□□□ -0.8
SSN3YPL042C APL4Q12028 832 aa10.08□□□□□ -0.8
SSN3YPL042C CWC2Q12046 339 aaPredicted RBP10.08□□□□□ -0.8
SSN3YPL042C REC8Q12188 680 aa10.08□□□□□ -0.8
SSN3YPL042C TRM11Q12463 433 aa10.08□□□□□ -0.8
SSN3YPL042C PHO8P11491 566 aa10.07□□□□□ -0.8
SSN3YPL042C ITR1P30605 584 aa10.07□□□□□ -0.8
SSN3YPL042C KRE6P32486 720 aa10.07□□□□□ -0.8
SSN3YPL042C YSC83P32792 385 aa10.07□□□□□ -0.8
SSN3YPL042C ATG14P38270 344 aa10.07□□□□□ -0.8
SSN3YPL042C SPC72P39723 622 aa10.07□□□□□ -0.8
SSN3YPL042C VFA1P40080 203 aa10.07□□□□□ -0.8
SSN3YPL042C VPS53P47061 822 aa10.07□□□□□ -0.8
SSN3YPL042C KXD1P53158 218 aa10.07□□□□□ -0.8
SSN3YPL042C COG6P53959 839 aa10.07□□□□□ -0.8
SSN3YPL042C ROD1Q02805 837 aa10.07□□□□□ -0.8
SSN3YPL042C YDR090CQ03193 310 aa10.07□□□□□ -0.8
SSN3YPL042C YCG1Q06680 1035 aa10.07□□□□□ -0.8
SSN3YPL042C NCR1Q12200 1170 aa10.07□□□□□ -0.8
SSN3YPL042C YDR461C-AQ2V2P7 80 aa10.07□□□□□ -0.8
SSN3YPL042C STF1P01098 86 aa10.06□□□□□ -0.8
SSN3YPL042C APL1P27351 700 aa10.06□□□□□ -0.8
SSN3YPL042C TIF3P34167 436 aaKnown RBP10.06□□□□□ -0.8
SSN3YPL042C YEL025CP39991 1188 aa10.06□□□□□ -0.8
SSN3YPL042C YIL166CP40445 542 aa10.06□□□□□ -0.8
SSN3YPL042C STU2P46675 888 aa10.06□□□□□ -0.8
SSN3YPL042C RPS7BP48164 190 aaKnown RBP10.06□□□□□ -0.8
SSN3YPL042C MDR1P53258 950 aa10.06□□□□□ -0.8
SSN3YPL042C CAF130P53280 1122 aaPredicted RBP10.06□□□□□ -0.8
SSN3YPL042C PXR1P53335 271 aaPredicted RBP10.06□□□□□ -0.8
SSN3YPL042C UBX4P54730 416 aa10.06□□□□□ -0.8
SSN3YPL042C ADA2Q02336 434 aa10.06□□□□□ -0.8
SSN3YPL042C YLR287CQ05881 355 aa10.06□□□□□ -0.8
SSN3YPL042C ESC2Q06340 456 aa10.06□□□□□ -0.8
SSN3YPL042C MNL2Q12205 849 aa10.06□□□□□ -0.8
SSN3YPL042C PRE10P21242 288 aaKnown RBP RIP-Chip data10.06□□□□□ -0.8not detected
SSN3YPL042C PTR2P32901 601 aa10.06□□□□□ -0.8
SSN3YPL042C TEF4P36008 412 aaKnown RBP10.06□□□□□ -0.8
SSN3YPL042C SET3P36124 751 aa10.06□□□□□ -0.8
SSN3YPL042C NNT1Q05874 261 aa10.06□□□□□ -0.8
SSN3YPL042C YPR097WQ06839 1073 aa10.06□□□□□ -0.8
SSN3YPL042C MET7Q08645 548 aa10.06□□□□□ -0.8
SSN3YPL042C ATG9Q12142 997 aa10.06□□□□□ -0.8
SSN3YPL042C TMA17Q12513 150 aa10.06□□□□□ -0.8
SSN3YPL042C HEM1P09950 548 aaPredicted RBP10.05□□□□□ -0.8
SSN3YPL042C SEC2P17065 759 aa10.05□□□□□ -0.8
SSN3YPL042C REC107P21651 314 aa10.05□□□□□ -0.8
SSN3YPL042C ZUO1P32527 433 aaKnown RBP10.05□□□□□ -0.8
SSN3YPL042C MRS6P32864 603 aaKnown RBP10.05□□□□□ -0.8
SSN3YPL042C TIM23P32897 222 aa10.05□□□□□ -0.8
SSN3YPL042C ERC1P38767 581 aa10.05□□□□□ -0.8
SSN3YPL042C ALD5P40047 520 aaKnown RBP10.05□□□□□ -0.8
SSN3YPL042C YJR107WP47145 328 aa10.05□□□□□ -0.8
SSN3YPL042C TRF5P48561 642 aaKnown RBP10.05□□□□□ -0.8
SSN3YPL042C FOL2P51601 243 aaKnown RBP10.05□□□□□ -0.8
SSN3YPL042C SCS3P53012 380 aa10.05□□□□□ -0.8
SSN3YPL042C MNP1P53163 194 aaPredicted RBP10.05□□□□□ -0.8
SSN3YPL042C ERB1Q04660 807 aaKnown RBP10.05□□□□□ -0.8
SSN3YPL042C GAD1Q04792 585 aa10.05□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms