RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeast

Gene PRE6, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRE6	YOL038W	YJR054W	P47114	497 aa		11.39	□□□□□ -0.59
PRE6	YOL038W	YNR061C	P53747	219 aa		11.39	□□□□□ -0.59
PRE6	YOL038W	MZM1	Q03429	123 aa	Predicted RBP	11.39	□□□□□ -0.59
PRE6	YOL038W	EBS1	Q03466	884 aa	Known RBP	11.39	□□□□□ -0.59
PRE6	YOL038W	GIR2	Q03768	265 aa	Predicted RBP	11.39	□□□□□ -0.59
PRE6	YOL038W	NSE1	Q07913	336 aa		11.39	□□□□□ -0.59
PRE6	YOL038W	AI5_BETA	Q9ZZX0	354 aa		11.39	□□□□□ -0.59
PRE6	YOL038W	MRM1	P25270	412 aa		11.38	□□□□□ -0.59
PRE6	YOL038W	BCH2	P36122	765 aa		11.38	□□□□□ -0.59
PRE6	YOL038W	SBE2	P42223	864 aa	Known RBP	11.38	□□□□□ -0.59
PRE6	YOL038W	IES1	P43579	692 aa		11.38	□□□□□ -0.59
PRE6	YOL038W	ECM22	Q05958	814 aa	Predicted RBP	11.38	□□□□□ -0.59
PRE6	YOL038W	COG4	Q06096	861 aa		11.38	□□□□□ -0.59
PRE6	YOL038W	HCM1	P25364	564 aa		11.37	□□□□□ -0.59
PRE6	YOL038W	GSY2	P27472	705 aa		11.37	□□□□□ -0.59
PRE6	YOL038W	ECM32	P32644	1121 aa	Known RBP	11.37	□□□□□ -0.59
PRE6	YOL038W	KDX1	P36005	433 aa		11.37	□□□□□ -0.59
PRE6	YOL038W	FAA4	P47912	694 aa	Known RBP	11.37	□□□□□ -0.59
PRE6	YOL038W	STE20	Q03497	939 aa	Known RBP	11.37	□□□□□ -0.59
PRE6	YOL038W	MEX67	Q99257	599 aa	Known RBP	11.37	□□□□□ -0.59
PRE6	YOL038W	MTF1	P14908	341 aa	Known RBP	11.36	□□□□□ -0.59
PRE6	YOL038W	DAL2	P25335	343 aa		11.36	□□□□□ -0.59
PRE6	YOL038W	MRC1	P25588	1096 aa		11.36	□□□□□ -0.59
PRE6	YOL038W	TSA1	P34760	196 aa	Known RBP	11.36	□□□□□ -0.59
PRE6	YOL038W	PSY4	P38193	441 aa		11.36	□□□□□ -0.59
PRE6	YOL038W	LEO1	P38439	464 aa		11.36	□□□□□ -0.59
PRE6	YOL038W	NPR3	P38742	1146 aa		11.36	□□□□□ -0.59
PRE6	YOL038W	AVT2	P39981	480 aa		11.36	□□□□□ -0.59
PRE6	YOL038W	BTT1	P40314	149 aa	Predicted RBP	11.36	□□□□□ -0.59
PRE6	YOL038W	LSB3	P43603	459 aa	Known RBP	11.36	□□□□□ -0.59
PRE6	YOL038W	ATH1	P48016	1211 aa		11.36	□□□□□ -0.59
PRE6	YOL038W	YLR297W	Q05899	129 aa		11.36	□□□□□ -0.59
PRE6	YOL038W	PDC6	P26263	563 aa	Known RBP	11.35	□□□□□ -0.59
PRE6	YOL038W	DAL1	P32375	460 aa		11.35	□□□□□ -0.59
PRE6	YOL038W	DSS4	P32601	143 aa		11.35	□□□□□ -0.59
PRE6	YOL038W	SWE1	P32944	819 aa		11.35	□□□□□ -0.59
PRE6	YOL038W	YBR225W	P38321	900 aa		11.35	□□□□□ -0.59
PRE6	YOL038W	RAD55	P38953	406 aa		11.35	□□□□□ -0.59
PRE6	YOL038W	DJP1	P40564	432 aa		11.35	□□□□□ -0.59
PRE6	YOL038W	TUB4	P53378	473 aa		11.35	□□□□□ -0.59
PRE6	YOL038W	CSR1	Q06705	408 aa	Known RBP	11.35	□□□□□ -0.59
PRE6	YOL038W	YET1	P35723	206 aa		11.34	□□□□□ -0.59
PRE6	YOL038W	NUP60	P39705	539 aa		11.34	□□□□□ -0.59
PRE6	YOL038W	CDC1	P40986	491 aa		11.34	□□□□□ -0.59
PRE6	YOL038W	RMD8	P43620	662 aa		11.34	□□□□□ -0.59
PRE6	YOL038W	GUF1	P46943	645 aa		11.34	□□□□□ -0.59
PRE6	YOL038W	KRE33	P53914	1056 aa	Known RBP	11.34	□□□□□ -0.59
PRE6	YOL038W	HAP5	Q02516	242 aa		11.34	□□□□□ -0.59
PRE6	YOL038W	SPO75	Q07798	868 aa		11.34	□□□□□ -0.59
PRE6	YOL038W	RCL1	Q08096	367 aa	Predicted RBP	11.34	□□□□□ -0.59
PRE6	YOL038W	DDC1	Q08949	612 aa		11.34	□□□□□ -0.59
PRE6	YOL038W	CSG2	P35206	410 aa		11.33	□□□□□ -0.6
PRE6	YOL038W	CTM1	P38818	585 aa		11.33	□□□□□ -0.6
PRE6	YOL038W	RVS167	P39743	482 aa	Known RBP	11.33	□□□□□ -0.6
PRE6	YOL038W	CHS6	P40955	746 aa		11.33	□□□□□ -0.6
PRE6	YOL038W	YGL036W	P53185	909 aa	Predicted RBP	11.33	□□□□□ -0.6
PRE6	YOL038W	TMA16	Q08687	178 aa		11.33	□□□□□ -0.6
PRE6	YOL038W	YOR387C	Q08910	206 aa		11.33	□□□□□ -0.6
PRE6	YOL038W	TRE1	Q08919	783 aa		11.33	□□□□□ -0.6
PRE6	YOL038W	VPS54	Q12071	889 aa		11.33	□□□□□ -0.6
PRE6	YOL038W	NBP2	Q12163	236 aa		11.33	□□□□□ -0.6
PRE6	YOL038W	LCB4	Q12246	624 aa		11.33	□□□□□ -0.6
PRE6	YOL038W	TRP2	P00899	507 aa	Known RBP	11.32	□□□□□ -0.6
PRE6	YOL038W	CDC37	P06101	506 aa	Known RBP	11.32	□□□□□ -0.6
PRE6	YOL038W	LRE1	P25579	583 aa	Known RBP	11.32	□□□□□ -0.6
PRE6	YOL038W	APL1	P27351	700 aa		11.32	□□□□□ -0.6
PRE6	YOL038W	MAP2	P38174	421 aa	Known RBP	11.32	□□□□□ -0.6
PRE6	YOL038W	VPS70	P47161	811 aa		11.32	□□□□□ -0.6
PRE6	YOL038W	CWC24	P53769	259 aa		11.32	□□□□□ -0.6
PRE6	YOL038W	YPL062W	Q02781	134 aa		11.32	□□□□□ -0.6
PRE6	YOL038W	CWC2	Q12046	339 aa	Predicted RBP	11.32	□□□□□ -0.6
PRE6	YOL038W	AIM44	Q99299	758 aa		11.32	□□□□□ -0.6
PRE6	YOL038W	MSB2	P32334	1306 aa		11.32	□□□□□ -0.6
PRE6	YOL038W	ABZ1	P37254	787 aa	Predicted RBP	11.31	□□□□□ -0.6
PRE6	YOL038W	ADE17	P38009	592 aa	Known RBP	11.31	□□□□□ -0.6
PRE6	YOL038W	EFM2	P38347	419 aa		11.31	□□□□□ -0.6
PRE6	YOL038W	YIL161W	P40449	235 aa	Known RBP	11.31	□□□□□ -0.6
PRE6	YOL038W	DRN1	P53255	507 aa	Known RBP	11.31	□□□□□ -0.6
PRE6	YOL038W	HRD3	Q05787	833 aa		11.31	□□□□□ -0.6
PRE6	YOL038W	FUS1	P11710	512 aa		11.3	□□□□□ -0.6
PRE6	YOL038W	STE5	P32917	917 aa		11.3	□□□□□ -0.6
PRE6	YOL038W	VPS24	P36095	224 aa	Known RBP	11.3	□□□□□ -0.6
PRE6	YOL038W	SHM1	P37292	490 aa	Predicted RBP	11.3	□□□□□ -0.6
PRE6	YOL038W	NEM1	P38757	446 aa		11.3	□□□□□ -0.6
PRE6	YOL038W	DYS1	P38791	387 aa		11.3	□□□□□ -0.6
PRE6	YOL038W	MTD1	Q02046	320 aa	Known RBP	11.3	□□□□□ -0.6
PRE6	YOL038W	DIS3	Q08162	1001 aa	Known RBP	11.3	□□□□□ -0.6
PRE6	YOL038W	LPX1	Q12405	387 aa	Known RBP	11.3	□□□□□ -0.6
PRE6	YOL038W	REV1	P12689	985 aa		11.29	□□□□□ -0.6
PRE6	YOL038W	TIF5	P38431	405 aa	Known RBP	11.29	□□□□□ -0.6
PRE6	YOL038W	YEL075C	P39972	122 aa		11.29	□□□□□ -0.6
PRE6	YOL038W	DOT6	P40059	670 aa	Known RBP	11.29	□□□□□ -0.6
PRE6	YOL038W	RPT2	P40327	437 aa	Known RBP	11.29	□□□□□ -0.6
PRE6	YOL038W	SHQ1	P40486	507 aa	Predicted RBP	11.29	□□□□□ -0.6
PRE6	YOL038W	GYP8	P43570	497 aa		11.29	□□□□□ -0.6
PRE6	YOL038W	PFD1	P46988	109 aa		11.29	□□□□□ -0.6
PRE6	YOL038W	COS5	P47187	383 aa		11.29	□□□□□ -0.6
PRE6	YOL038W	MND1	P53102	219 aa		11.29	□□□□□ -0.6
PRE6	YOL038W	GFD1	Q04839	188 aa	Known RBP	11.29	□□□□□ -0.6
PRE6	YOL038W	MSH2	P25847	964 aa		11.28	□□□□□ -0.6

Retrieved 100 of 5,963 RNA–protein pairs in 94.1 ms