RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C NIT3P49954 291 aa3.84□□□□□ -1.79
HRD1YOL013C RSC1P53236 928 aa3.84□□□□□ -1.79
HRD1YOL013C MEP3P53390 489 aa3.84□□□□□ -1.79
HRD1YOL013C GTR1Q00582 310 aa3.84□□□□□ -1.79
HRD1YOL013C CTF4Q01454 927 aa3.84□□□□□ -1.79
HRD1YOL013C KIN4Q01919 800 aa3.84□□□□□ -1.79
HRD1YOL013C MEH1Q02205 184 aa3.84□□□□□ -1.79
HRD1YOL013C CIA1Q05583 330 aa3.84□□□□□ -1.79
HRD1YOL013C ECM38Q05902 660 aaPredicted RBP3.84□□□□□ -1.79
HRD1YOL013C ATG33Q06485 197 aa3.84□□□□□ -1.79
HRD1YOL013C MED1Q12321 566 aa3.84□□□□□ -1.79
HRD1YOL013C RPS9AO13516 197 aaKnown RBP3.84□□□□□ -1.8
HRD1YOL013C URA1P28272 314 aaPredicted RBP3.84□□□□□ -1.8
HRD1YOL013C CHS3P29465 1165 aa3.84□□□□□ -1.8
HRD1YOL013C SWI3P32591 825 aa3.84□□□□□ -1.8
HRD1YOL013C GZF3P42944 551 aaKnown RBP3.84□□□□□ -1.8
HRD1YOL013C TAD1P53065 400 aa3.84□□□□□ -1.8
HRD1YOL013C HDA1P53973 706 aa3.84□□□□□ -1.8
HRD1YOL013C TRS130Q03660 1102 aa3.84□□□□□ -1.8
HRD1YOL013C VIP1Q06685 1146 aaKnown RBP3.84□□□□□ -1.8
HRD1YOL013C PSK2Q08217 1101 aa3.84□□□□□ -1.8
HRD1YOL013C NEW1Q08972 1196 aaKnown RBP3.84□□□□□ -1.8
HRD1YOL013C LAS17Q12446 633 aa3.84□□□□□ -1.8
HRD1YOL013C RMP1Q12530 201 aa3.84□□□□□ -1.8
HRD1YOL013C TRP4P07285 380 aaPredicted RBP3.83□□□□□ -1.8
HRD1YOL013C RPS21AP0C0V8 87 aaKnown RBP3.83□□□□□ -1.8
HRD1YOL013C PER1P25625 357 aa3.83□□□□□ -1.8
HRD1YOL013C EFT1P32324 842 aaKnown RBP3.83□□□□□ -1.8
HRD1YOL013C TFC3P34111 1160 aa3.83□□□□□ -1.8
HRD1YOL013C MCD4P36051 919 aa3.83□□□□□ -1.8
HRD1YOL013C FAF1P40546 346 aaPredicted RBP3.83□□□□□ -1.8
HRD1YOL013C MNN11P46985 422 aaKnown RBP3.83□□□□□ -1.8
HRD1YOL013C SLI1P53304 468 aa3.83□□□□□ -1.8
HRD1YOL013C MOT3P54785 490 aaKnown RBP3.83□□□□□ -1.8
HRD1YOL013C ECM9Q02202 377 aa3.83□□□□□ -1.8
HRD1YOL013C RSC3Q06639 885 aa3.83□□□□□ -1.8
HRD1YOL013C PEX19Q07418 342 aa3.83□□□□□ -1.8
HRD1YOL013C GRC3Q07845 632 aa3.83□□□□□ -1.8
HRD1YOL013C ENV7Q12003 364 aa3.83□□□□□ -1.8
HRD1YOL013C SWM1Q12379 170 aa3.83□□□□□ -1.8
HRD1YOL013C SEC18P18759 758 aaKnown RBP3.82□□□□□ -1.8
HRD1YOL013C YEL1P34225 687 aa3.82□□□□□ -1.8
HRD1YOL013C RKM3P38222 552 aa3.82□□□□□ -1.8
HRD1YOL013C CHS7P38843 316 aa3.82□□□□□ -1.8
HRD1YOL013C CTF8P38877 133 aa3.82□□□□□ -1.8
HRD1YOL013C CAF16P43569 289 aa3.82□□□□□ -1.8
HRD1YOL013C PUS2P53167 370 aa3.82□□□□□ -1.8
HRD1YOL013C YGR283CP53336 341 aaPredicted RBP3.82□□□□□ -1.8
HRD1YOL013C NOG2P53742 486 aaKnown RBP3.82□□□□□ -1.8
HRD1YOL013C CEG1Q01159 459 aaPredicted RBP3.82□□□□□ -1.8
HRD1YOL013C VPS5Q92331 675 aa3.82□□□□□ -1.8
HRD1YOL013C COX11P19516 300 aaKnown RBP3.81□□□□□ -1.8
HRD1YOL013C MIH1P23748 554 aa3.81□□□□□ -1.8
HRD1YOL013C VPS8P39702 1274 aa3.81□□□□□ -1.8
HRD1YOL013C IML2P47031 731 aa3.81□□□□□ -1.8
HRD1YOL013C SRB7P47822 140 aa3.81□□□□□ -1.8
HRD1YOL013C YGR153WP48238 217 aa3.81□□□□□ -1.8
HRD1YOL013C DAM1P53267 343 aa3.81□□□□□ -1.8
HRD1YOL013C TSR2Q06672 205 aaKnown RBP3.81□□□□□ -1.8
HRD1YOL013C HIM1Q06674 414 aa3.81□□□□□ -1.8
HRD1YOL013C YOL114CQ12322 202 aa3.81□□□□□ -1.8
HRD1YOL013C CYS3P31373 394 aaKnown RBP3.81□□□□□ -1.8
HRD1YOL013C SEC21P32074 935 aaKnown RBP3.81□□□□□ -1.8
HRD1YOL013C HOG1P32485 435 aa3.81□□□□□ -1.8
HRD1YOL013C ECM32P32644 1121 aaKnown RBP3.81□□□□□ -1.8
HRD1YOL013C STO1P34160 861 aaKnown RBP3.81□□□□□ -1.8
HRD1YOL013C YHR078WP38799 552 aa3.81□□□□□ -1.8
HRD1YOL013C HXT6P39003 570 aaKnown RBP3.81□□□□□ -1.8
HRD1YOL013C HXT7P39004 570 aa3.81□□□□□ -1.8
HRD1YOL013C VTC2P43585 828 aa3.81□□□□□ -1.8
HRD1YOL013C TAN1P53072 289 aaPredicted RBP3.81□□□□□ -1.8
HRD1YOL013C MET7Q08645 548 aa3.81□□□□□ -1.8
HRD1YOL013C GFA1P14742 717 aaKnown RBP3.8□□□□□ -1.8
HRD1YOL013C SAN1P22470 610 aa3.8□□□□□ -1.8
HRD1YOL013C ERG4P25340 473 aa3.8□□□□□ -1.8
HRD1YOL013C IMP2'P32351 346 aa3.8□□□□□ -1.8
HRD1YOL013C SUL1P38359 859 aa3.8□□□□□ -1.8
HRD1YOL013C CCT5P40413 562 aaKnown RBP3.8□□□□□ -1.8
HRD1YOL013C TMA108P40462 946 aa3.8□□□□□ -1.8
HRD1YOL013C YFR016CP43597 1233 aaKnown RBP3.8□□□□□ -1.8
HRD1YOL013C BUL1P48524 976 aa3.8□□□□□ -1.8
HRD1YOL013C UBC9P50623 157 aaPredicted RBP3.8□□□□□ -1.8
HRD1YOL013C SLU7Q02775 382 aaKnown RBP3.8□□□□□ -1.8
HRD1YOL013C EIS1Q05050 843 aaKnown RBP3.8□□□□□ -1.8
HRD1YOL013C PSR1Q07800 427 aa3.8□□□□□ -1.8
HRD1YOL013C YLR040CQ07988 224 aa3.8□□□□□ -1.8
HRD1YOL013C SDH5Q08230 162 aa3.8□□□□□ -1.8
HRD1YOL013C YOL073CQ08232 322 aa3.8□□□□□ -1.8
HRD1YOL013C CLF1Q12309 687 aaPredicted RBP3.8□□□□□ -1.8
HRD1YOL013C TRM11Q12463 433 aa3.8□□□□□ -1.8
HRD1YOL013C RPS21BQ3E754 87 aaKnown RBP3.8□□□□□ -1.8
HRD1YOL013C DAL7P21826 554 aa3.79□□□□□ -1.8
HRD1YOL013C YKU70P32807 602 aa3.79□□□□□ -1.8
HRD1YOL013C CTF13P35203 478 aa3.79□□□□□ -1.8
HRD1YOL013C EMC3P36039 253 aa3.79□□□□□ -1.8
HRD1YOL013C MUD2P36084 527 aaKnown RBP3.79□□□□□ -1.8
HRD1YOL013C MPP10P47083 593 aaKnown RBP3.79□□□□□ -1.8
HRD1YOL013C PAP2P53632 584 aaKnown RBP3.79□□□□□ -1.8
HRD1YOL013C IRC3Q06683 689 aa3.79□□□□□ -1.8
HRD1YOL013C YPR027CQ12079 277 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms