RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A TCD1P38756 429 aa13.48□□□□□ -0.25
LSM3YLR438C-A CCC2P38995 1004 aa13.48□□□□□ -0.25
LSM3YLR438C-A VAC14Q06708 880 aa13.48□□□□□ -0.25
LSM3YLR438C-A AHC1Q12433 566 aa13.48□□□□□ -0.25
LSM3YLR438C-A HXT1P32465 570 aa13.47□□□□□ -0.25
LSM3YLR438C-A SPC72P39723 622 aa13.47□□□□□ -0.25
LSM3YLR438C-A YEL023CP39992 682 aa13.47□□□□□ -0.25
LSM3YLR438C-A NDC80P40460 691 aa13.47□□□□□ -0.25
LSM3YLR438C-A YGR111WP53265 400 aa13.47□□□□□ -0.25
LSM3YLR438C-A EMI2Q04409 500 aaKnown RBP13.47□□□□□ -0.25
LSM3YLR438C-A YML083CQ04526 418 aa13.47□□□□□ -0.25
LSM3YLR438C-A VPS13Q07878 3144 aa13.47□□□□□ -0.25
LSM3YLR438C-A PRC1P00729 532 aa13.46□□□□□ -0.25
LSM3YLR438C-A CKI1P20485 582 aa13.46□□□□□ -0.25
LSM3YLR438C-A LRE1P25579 583 aaKnown RBP13.46□□□□□ -0.25
LSM3YLR438C-A RGD1P38339 666 aa13.46□□□□□ -0.25
LSM3YLR438C-A TDA3P38758 523 aa13.46□□□□□ -0.25
LSM3YLR438C-A MRN1Q08925 612 aaKnown RBP RIP-Chip data13.46□□□□□ -0.25not detected
LSM3YLR438C-A MMF1P40185 145 aaKnown RBP13.45□□□□□ -0.26
LSM3YLR438C-A ZAP1P47043 880 aa13.45□□□□□ -0.26
LSM3YLR438C-A KAP114P53067 1004 aa13.45□□□□□ -0.26
LSM3YLR438C-A MET13P53128 600 aa13.45□□□□□ -0.26
LSM3YLR438C-A PNG1Q02890 363 aa13.45□□□□□ -0.26
LSM3YLR438C-A HEH2Q03281 663 aa13.45□□□□□ -0.26
LSM3YLR438C-A SML1Q04964 104 aa13.45□□□□□ -0.26
LSM3YLR438C-A MRI1Q06489 411 aaKnown RBP13.45□□□□□ -0.26
LSM3YLR438C-A SIL1Q08199 421 aa13.45□□□□□ -0.26
LSM3YLR438C-A TRE1Q08919 783 aa13.45□□□□□ -0.26
LSM3YLR438C-A VPH1P32563 840 aaKnown RBP13.44□□□□□ -0.26
LSM3YLR438C-A SLA2P33338 968 aa13.44□□□□□ -0.26
LSM3YLR438C-A HMT1P38074 348 aa13.44□□□□□ -0.26
LSM3YLR438C-A DSE1P40077 573 aa13.44□□□□□ -0.26
LSM3YLR438C-A YMR1P47147 688 aaKnown RBP RIP-Chip data13.44□□□□□ -0.26not detected
LSM3YLR438C-A ERV41Q04651 352 aa13.44□□□□□ -0.26
LSM3YLR438C-A YDR222WQ04925 415 aa13.44□□□□□ -0.26
LSM3YLR438C-A IDI1P15496 288 aa13.43□□□□□ -0.26
LSM3YLR438C-A QNS1P38795 714 aaKnown RBP13.43□□□□□ -0.26
LSM3YLR438C-A FMP10P40098 244 aa13.43□□□□□ -0.26
LSM3YLR438C-A YFL052WP43551 465 aa13.43□□□□□ -0.26
LSM3YLR438C-A NUT1P53114 1132 aa13.43□□□□□ -0.26
LSM3YLR438C-A ARO80Q04052 950 aa13.43□□□□□ -0.26
LSM3YLR438C-A YMR114CQ04471 368 aaKnown RBP13.43□□□□□ -0.26
LSM3YLR438C-A YOR059CQ08448 450 aaKnown RBP13.43□□□□□ -0.26
LSM3YLR438C-A TPK1P06244 397 aa13.42□□□□□ -0.26
LSM3YLR438C-A ATP1P07251 545 aaKnown RBP13.42□□□□□ -0.26
LSM3YLR438C-A ERG11P10614 530 aa13.42□□□□□ -0.26
LSM3YLR438C-A SAT4P25333 603 aaKnown RBP13.42□□□□□ -0.26
LSM3YLR438C-A DBF4P32325 704 aa13.42□□□□□ -0.26
LSM3YLR438C-A NCL1P38205 684 aaKnown RBP13.42□□□□□ -0.26
LSM3YLR438C-A RFS1P38234 210 aaKnown RBP13.42□□□□□ -0.26
LSM3YLR438C-A HIS2P38635 335 aa13.42□□□□□ -0.26
LSM3YLR438C-A YEL075CP39972 122 aa13.42□□□□□ -0.26
LSM3YLR438C-A RPT2P40327 437 aaKnown RBP13.42□□□□□ -0.26
LSM3YLR438C-A BTN2P53286 410 aa13.42□□□□□ -0.26
LSM3YLR438C-A SPP1Q03012 353 aa13.42□□□□□ -0.26
LSM3YLR438C-A VPS60Q03390 229 aa13.42□□□□□ -0.26
LSM3YLR438C-A SPO71Q03868 1245 aa13.42□□□□□ -0.26
LSM3YLR438C-A BCH2P36122 765 aa13.41□□□□□ -0.26
LSM3YLR438C-A TGL3P40308 642 aa13.41□□□□□ -0.26
LSM3YLR438C-A PFD1P46988 109 aa13.41□□□□□ -0.26
LSM3YLR438C-A BOP3P53958 396 aa13.41□□□□□ -0.26
LSM3YLR438C-A GPM2Q12008 311 aa13.41□□□□□ -0.26
LSM3YLR438C-A MNL2Q12205 849 aa13.41□□□□□ -0.26
LSM3YLR438C-A BI2P03873 423 aa13.4□□□□□ -0.26
LSM3YLR438C-A BI4P03879 638 aa13.4□□□□□ -0.26
LSM3YLR438C-A KAR3P17119 729 aa13.4□□□□□ -0.26
LSM3YLR438C-A TKL2P33315 681 aa13.4□□□□□ -0.26
LSM3YLR438C-A YBL036CP38197 257 aa13.4□□□□□ -0.26
LSM3YLR438C-A PCM1P38628 557 aaKnown RBP13.4□□□□□ -0.26
LSM3YLR438C-A TAF1P46677 1066 aa13.4□□□□□ -0.26
LSM3YLR438C-A NGL3Q03210 505 aa13.4□□□□□ -0.26
LSM3YLR438C-A ATG16Q03818 150 aa13.4□□□□□ -0.26
LSM3YLR438C-A GYL1Q04322 720 aa13.4□□□□□ -0.26
LSM3YLR438C-A PUF3Q07807 879 aaKnown RBP RIP-Chip data13.4□□□□□ -0.26not detected
LSM3YLR438C-A MDM38Q08179 573 aa13.4□□□□□ -0.26
LSM3YLR438C-A MCM16Q12262 181 aa13.4□□□□□ -0.26
LSM3YLR438C-A EMP46Q12396 444 aa13.4□□□□□ -0.26
LSM3YLR438C-A BI3Q9ZZW7 517 aa13.4□□□□□ -0.26
LSM3YLR438C-A MAS1P10507 462 aa13.39□□□□□ -0.27
LSM3YLR438C-A GCS1P35197 352 aa13.39□□□□□ -0.27
LSM3YLR438C-A RRT2P38332 387 aa13.39□□□□□ -0.27
LSM3YLR438C-A FAF1P40546 346 aaPredicted RBP13.39□□□□□ -0.27
LSM3YLR438C-A SNZ3P43545 298 aa13.39□□□□□ -0.27
LSM3YLR438C-A PUS2P53167 370 aa13.39□□□□□ -0.27
LSM3YLR438C-A SNZ2P53824 298 aa13.39□□□□□ -0.27
LSM3YLR438C-A SXM1Q04175 944 aaKnown RBP13.39□□□□□ -0.27
LSM3YLR438C-A PRM6Q04705 352 aa13.39□□□□□ -0.27
LSM3YLR438C-A APC5Q08683 685 aa13.39□□□□□ -0.27
LSM3YLR438C-A VPS54Q12071 889 aa13.39□□□□□ -0.27
LSM3YLR438C-A GFA1P14742 717 aaKnown RBP13.38□□□□□ -0.27
LSM3YLR438C-A AEP2P22136 580 aa13.38□□□□□ -0.27
LSM3YLR438C-A ABD1P32783 436 aaPredicted RBP13.38□□□□□ -0.27
LSM3YLR438C-A PEX2P32800 271 aa13.38□□□□□ -0.27
LSM3YLR438C-A SEG2P34250 1132 aa13.38□□□□□ -0.27
LSM3YLR438C-A REI1P38344 393 aaPredicted RBP13.38□□□□□ -0.27
LSM3YLR438C-A CWC22P53333 577 aaKnown RBP13.38□□□□□ -0.27
LSM3YLR438C-A ADA2Q02336 434 aa13.38□□□□□ -0.27
LSM3YLR438C-A HRT3Q12347 344 aa13.38□□□□□ -0.27
LSM3YLR438C-A RAD27P26793 382 aa13.37□□□□□ -0.27
LSM3YLR438C-A MRP4P32902 394 aa13.37□□□□□ -0.27
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms