RNA–Protein interactions for RNA: YLR313C

SPH1, Transcript of Protein involved in shmoo formation and bipolar bud site selection, yeast

Gene SPH1, Length 1,593 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPH1	YLR313C	NOP15	P53927	220 aa	Predicted RBP	4.4	□□□□□ -1.7
SPH1	YLR313C	YNL034W	P53963	612 aa		4.4	□□□□□ -1.7
SPH1	YLR313C	YNL018C	P53976	612 aa		4.4	□□□□□ -1.7
SPH1	YLR313C	ISA1	Q07821	250 aa	Predicted RBP	4.4	□□□□□ -1.7
SPH1	YLR313C	YPR027C	Q12079	277 aa		4.4	□□□□□ -1.7
SPH1	YLR313C	ERG6	P25087	383 aa	Known RBP	4.4	□□□□□ -1.71
SPH1	YLR313C	APT2	P36973	181 aa		4.4	□□□□□ -1.71
SPH1	YLR313C	UBP5	P39944	805 aa		4.4	□□□□□ -1.71
SPH1	YLR313C	RCR2	Q03446	210 aa	Known RBP	4.4	□□□□□ -1.71
SPH1	YLR313C	YMR210W	Q03649	449 aa		4.4	□□□□□ -1.71
SPH1	YLR313C	SKY1	Q03656	742 aa		4.4	□□□□□ -1.71
SPH1	YLR313C	GAD1	Q04792	585 aa		4.4	□□□□□ -1.71
SPH1	YLR313C	YPS7	Q06325	596 aa		4.4	□□□□□ -1.71
SPH1	YLR313C	TRM13	Q12383	476 aa		4.4	□□□□□ -1.71
SPH1	YLR313C	HRP1	Q99383	534 aa	Known RBP	4.4	□□□□□ -1.71
SPH1	YLR313C	RPS17A	P02407	136 aa	Known RBP	4.39	□□□□□ -1.71
SPH1	YLR313C	TOP1	P04786	769 aa		4.39	□□□□□ -1.71
SPH1	YLR313C	RPS17B	P14127	136 aa	Known RBP	4.39	□□□□□ -1.71
SPH1	YLR313C	CDC26	P14724	124 aa		4.39	□□□□□ -1.71
SPH1	YLR313C	RNR1	P21524	888 aa	Known RBP	4.39	□□□□□ -1.71
SPH1	YLR313C	ATP12	P22135	325 aa		4.39	□□□□□ -1.71
SPH1	YLR313C	YBR053C	P38235	358 aa		4.39	□□□□□ -1.71
SPH1	YLR313C	RTS3	P53289	263 aa		4.39	□□□□□ -1.71
SPH1	YLR313C	REC102	Q02721	264 aa		4.39	□□□□□ -1.71
SPH1	YLR313C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.39	□□□□□ -1.71	not detected
SPH1	YLR313C	KAR1	P11927	433 aa		4.38	□□□□□ -1.71
SPH1	YLR313C	COX11	P19516	300 aa	Known RBP	4.38	□□□□□ -1.71
SPH1	YLR313C	IME1	P21190	360 aa		4.38	□□□□□ -1.71
SPH1	YLR313C	HEM12	P32347	362 aa	Predicted RBP	4.38	□□□□□ -1.71
SPH1	YLR313C	GET2	P40056	285 aa		4.38	□□□□□ -1.71
SPH1	YLR313C	VID28	P40547	921 aa		4.38	□□□□□ -1.71
SPH1	YLR313C	IES1	P43579	692 aa		4.38	□□□□□ -1.71
SPH1	YLR313C	RNR4	P49723	345 aa	Known RBP	4.38	□□□□□ -1.71
SPH1	YLR313C	PHM6	Q05637	104 aa		4.38	□□□□□ -1.71
SPH1	YLR313C	VHS3	Q08438	674 aa		4.38	□□□□□ -1.71
SPH1	YLR313C	TMA7	Q3E764	64 aa	Known RBP	4.38	□□□□□ -1.71
SPH1	YLR313C	LAT1	P12695	482 aa	Known RBP	4.37	□□□□□ -1.71
SPH1	YLR313C	HCM1	P25364	564 aa		4.37	□□□□□ -1.71
SPH1	YLR313C	TRZ1	P36159	838 aa	Predicted RBP	4.37	□□□□□ -1.71
SPH1	YLR313C	SHM2	P37291	469 aa	Known RBP	4.37	□□□□□ -1.71
SPH1	YLR313C	LYS9	P38999	446 aa		4.37	□□□□□ -1.71
SPH1	YLR313C	ELO3	P40319	345 aa		4.37	□□□□□ -1.71
SPH1	YLR313C	NOP9	P47077	666 aa	Known RBP	4.37	□□□□□ -1.71
SPH1	YLR313C	MUP1	P50276	574 aa		4.37	□□□□□ -1.71
SPH1	YLR313C	SPC105	P53148	917 aa		4.37	□□□□□ -1.71
SPH1	YLR313C	MTL1	P53214	551 aa		4.37	□□□□□ -1.71
SPH1	YLR313C	COX18	P53239	316 aa		4.37	□□□□□ -1.71
SPH1	YLR313C	DLT1	Q04216	342 aa		4.37	□□□□□ -1.71
SPH1	YLR313C	ECM38	Q05902	660 aa	Predicted RBP	4.37	□□□□□ -1.71
SPH1	YLR313C	RGC1	Q06108	1083 aa	Known RBP	4.37	□□□□□ -1.71
SPH1	YLR313C	VPS36	Q06696	566 aa		4.37	□□□□□ -1.71
SPH1	YLR313C	STP4	Q07351	490 aa		4.37	□□□□□ -1.71
SPH1	YLR313C	SGO1	Q08490	590 aa		4.37	□□□□□ -1.71
SPH1	YLR313C	NTO1	Q12311	748 aa		4.37	□□□□□ -1.71
SPH1	YLR313C	ATG11	Q12527	1178 aa		4.37	□□□□□ -1.71
SPH1	YLR313C	ECM3	Q99252	613 aa		4.37	□□□□□ -1.71
SPH1	YLR313C	MPD2	Q99316	277 aa		4.37	□□□□□ -1.71
SPH1	YLR313C	MET3	P08536	511 aa		4.36	□□□□□ -1.71
SPH1	YLR313C	FRS1	P15624	595 aa	Known RBP	4.36	□□□□□ -1.71
SPH1	YLR313C	PET127	P32606	800 aa		4.36	□□□□□ -1.71
SPH1	YLR313C	YPT7	P32939	208 aa		4.36	□□□□□ -1.71
SPH1	YLR313C	PEA2	P40091	420 aa		4.36	□□□□□ -1.71
SPH1	YLR313C	HOS4	P40480	1083 aa		4.36	□□□□□ -1.71
SPH1	YLR313C	YIR042C	P40586	236 aa		4.36	□□□□□ -1.71
SPH1	YLR313C	NOP2	P40991	618 aa	Known RBP	4.36	□□□□□ -1.71
SPH1	YLR313C	BAP3	P41815	604 aa		4.36	□□□□□ -1.71
SPH1	YLR313C	TAF1	P46677	1066 aa		4.36	□□□□□ -1.71
SPH1	YLR313C	SLX4	Q12098	748 aa		4.36	□□□□□ -1.71
SPH1	YLR313C	CAF20	P12962	161 aa	Known RBP	4.36	□□□□□ -1.71
SPH1	YLR313C	HCA4	P20448	770 aa	Known RBP	4.36	□□□□□ -1.71
SPH1	YLR313C	HRR25	P29295	494 aa	Known RBP	4.36	□□□□□ -1.71
SPH1	YLR313C	EFT1	P32324	842 aa	Known RBP	4.36	□□□□□ -1.71
SPH1	YLR313C	HXT4	P32467	576 aa		4.36	□□□□□ -1.71
SPH1	YLR313C	DUN1	P39009	513 aa		4.36	□□□□□ -1.71
SPH1	YLR313C	AMA1	P50082	593 aa		4.36	□□□□□ -1.71
SPH1	YLR313C	SLD3	P53135	668 aa		4.36	□□□□□ -1.71
SPH1	YLR313C	CTK1	Q03957	528 aa	Known RBP	4.36	□□□□□ -1.71
SPH1	YLR313C	ESC8	Q08119	714 aa		4.36	□□□□□ -1.71
SPH1	YLR313C	PEX15	Q08215	383 aa		4.36	□□□□□ -1.71
SPH1	YLR313C	MF(ALPHA)2	P32435	120 aa		4.35	□□□□□ -1.71
SPH1	YLR313C	DEF1	P35732	738 aa	Known RBP	4.35	□□□□□ -1.71
SPH1	YLR313C	FMO1	P38866	432 aa		4.35	□□□□□ -1.71
SPH1	YLR313C	EMP65	P40085	556 aa		4.35	□□□□□ -1.71
SPH1	YLR313C	BUD8	P41698	603 aa		4.35	□□□□□ -1.71
SPH1	YLR313C	RSC8	P43609	557 aa	Known RBP	4.35	□□□□□ -1.71
SPH1	YLR313C	ERG20	P08524	352 aa	Known RBP	4.34	□□□□□ -1.71
SPH1	YLR313C	ERG4	P25340	473 aa		4.34	□□□□□ -1.71
SPH1	YLR313C	BIT61	P47041	543 aa		4.34	□□□□□ -1.71
SPH1	YLR313C	YLR040C	Q07988	224 aa		4.34	□□□□□ -1.71
SPH1	YLR313C	IRC13	Q08630	104 aa		4.34	□□□□□ -1.71
SPH1	YLR313C	YOR378W	Q08902	515 aa		4.34	□□□□□ -1.71
SPH1	YLR313C	FRE5	Q08908	694 aa		4.34	□□□□□ -1.71
SPH1	YLR313C	SST2	P11972	698 aa	Known RBP	4.33	□□□□□ -1.72
SPH1	YLR313C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.33	□□□□□ -1.72	not detected
SPH1	YLR313C	SEC6	P32844	805 aa		4.33	□□□□□ -1.72
SPH1	YLR313C	BCD1	P38772	366 aa		4.33	□□□□□ -1.72
SPH1	YLR313C	CCT3	P39077	534 aa	Known RBP	4.33	□□□□□ -1.72
SPH1	YLR313C	NUP60	P39705	539 aa		4.33	□□□□□ -1.72
SPH1	YLR313C	YJL163C	P46996	555 aa		4.33	□□□□□ -1.72
SPH1	YLR313C	VBA4	Q04602	768 aa	Known RBP	4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms