RNA–Protein interactions for RNA: YKL196C

YKT6, Transcript of Vesicle membrane protein (v-SNARE) with acyltransferase activity, yeastyeast

Gene YKT6, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKT6YKL196C BCD1P38772 366 aa3.89□□□□□ -1.79
YKT6YKL196C SDS3P40505 327 aa3.89□□□□□ -1.79
YKT6YKL196C TIM44Q01852 431 aa3.89□□□□□ -1.79
YKT6YKL196C COG4Q06096 861 aa3.89□□□□□ -1.79
YKT6YKL196C APC5Q08683 685 aa3.89□□□□□ -1.79
YKT6YKL196C CLF1Q12309 687 aaPredicted RBP3.89□□□□□ -1.79
YKT6YKL196C MDM12Q92328 271 aa3.89□□□□□ -1.79
YKT6YKL196C TY1B-AO13527 1196 aaKnown RBP3.88□□□□□ -1.79
YKT6YKL196C PHO8P11491 566 aa3.88□□□□□ -1.79
YKT6YKL196C KAR1P11927 433 aa3.88□□□□□ -1.79
YKT6YKL196C VBA3P25594 458 aa3.88□□□□□ -1.79
YKT6YKL196C RPL5P26321 297 aaKnown RBP3.88□□□□□ -1.79
YKT6YKL196C YHL017WP38745 532 aa3.88□□□□□ -1.79
YKT6YKL196C DSS1P39112 969 aa3.88□□□□□ -1.79
YKT6YKL196C QRI1P43123 477 aaKnown RBP3.88□□□□□ -1.79
YKT6YKL196C VID30P53076 958 aa3.88□□□□□ -1.79
YKT6YKL196C ECM16Q04217 1267 aaKnown RBP3.88□□□□□ -1.79
YKT6YKL196C RPN7Q06103 429 aaKnown RBP3.88□□□□□ -1.79
YKT6YKL196C GGA1Q06336 557 aa3.88□□□□□ -1.79
YKT6YKL196C HBT1Q07653 1046 aaKnown RBP3.88□□□□□ -1.79
YKT6YKL196C CEX1Q12453 761 aa3.88□□□□□ -1.79
YKT6YKL196C VPS5Q92331 675 aa3.88□□□□□ -1.79
YKT6YKL196C CLC1P17891 233 aa3.87□□□□□ -1.79
YKT6YKL196C ADE2P21264 571 aaKnown RBP3.87□□□□□ -1.79
YKT6YKL196C RPA135P22138 1203 aaKnown RBP3.87□□□□□ -1.79
YKT6YKL196C MSM1P22438 575 aa3.87□□□□□ -1.79
YKT6YKL196C EFB1P32471 206 aaKnown RBP3.87□□□□□ -1.79
YKT6YKL196C TFC3P34111 1160 aa3.87□□□□□ -1.79
YKT6YKL196C STO1P34160 861 aaKnown RBP3.87□□□□□ -1.79
YKT6YKL196C YKR051WP36142 418 aa3.87□□□□□ -1.79
YKT6YKL196C YBR259WP38338 688 aa3.87□□□□□ -1.79
YKT6YKL196C AIM20P40451 204 aa3.87□□□□□ -1.79
YKT6YKL196C STU2P46675 888 aa3.87□□□□□ -1.79
YKT6YKL196C DAS1P47005 663 aa3.87□□□□□ -1.79
YKT6YKL196C PRP31P49704 494 aaPredicted RBP3.87□□□□□ -1.79
YKT6YKL196C MTL1P53214 551 aa3.87□□□□□ -1.79
YKT6YKL196C RGC1Q06108 1083 aaKnown RBP3.87□□□□□ -1.79
YKT6YKL196C MRH1Q12117 320 aaPredicted RBP3.87□□□□□ -1.79
YKT6YKL196C SGT2Q12118 346 aaKnown RBP3.87□□□□□ -1.79
YKT6YKL196C SEC3P33332 1336 aaKnown RBP3.87□□□□□ -1.79
YKT6YKL196C SSB1P11484 613 aaKnown RBP3.86□□□□□ -1.79
YKT6YKL196C THR4P16120 514 aaKnown RBP3.86□□□□□ -1.79
YKT6YKL196C ERG6P25087 383 aaKnown RBP3.86□□□□□ -1.79
YKT6YKL196C RPN12P32496 274 aa3.86□□□□□ -1.79
YKT6YKL196C YHR112CP38716 378 aa3.86□□□□□ -1.79
YKT6YKL196C LYS9P38999 446 aa3.86□□□□□ -1.79
YKT6YKL196C SSB2P40150 613 aaKnown RBP3.86□□□□□ -1.79
YKT6YKL196C YFL052WP43551 465 aa3.86□□□□□ -1.79
YKT6YKL196C CAF16P43569 289 aa3.86□□□□□ -1.79
YKT6YKL196C BNA2P47125 453 aa3.86□□□□□ -1.79
YKT6YKL196C UBC11P52492 156 aa3.86□□□□□ -1.79
YKT6YKL196C NPY1P53164 384 aa3.86□□□□□ -1.79
YKT6YKL196C SNP1Q00916 300 aaPredicted RBP3.86□□□□□ -1.79
YKT6YKL196C VMS1Q04311 632 aaKnown RBP3.86□□□□□ -1.79
YKT6YKL196C GAD1Q04792 585 aa3.86□□□□□ -1.79
YKT6YKL196C YLR125WQ12138 136 aa3.86□□□□□ -1.79
YKT6YKL196C SUT2Q12286 268 aa3.86□□□□□ -1.79
YKT6YKL196C MSH2P25847 964 aa3.85□□□□□ -1.79
YKT6YKL196C BRF1P29056 596 aa3.85□□□□□ -1.79
YKT6YKL196C THI4P32318 326 aa3.85□□□□□ -1.79
YKT6YKL196C HIR1P32479 840 aa3.85□□□□□ -1.79
YKT6YKL196C SWI3P32591 825 aa3.85□□□□□ -1.79
YKT6YKL196C NFU1P32860 256 aa3.85□□□□□ -1.79
YKT6YKL196C YHR218WP38899 603 aa3.85□□□□□ -1.79
YKT6YKL196C FMP52P40008 231 aa3.85□□□□□ -1.79
YKT6YKL196C BAP3P41815 604 aa3.85□□□□□ -1.79
YKT6YKL196C BFA1P47113 574 aa3.85□□□□□ -1.79
YKT6YKL196C KEL2P50090 882 aa3.85□□□□□ -1.79
YKT6YKL196C UBC9P50623 157 aaPredicted RBP3.85□□□□□ -1.79
YKT6YKL196C MDM1Q01846 1127 aa3.85□□□□□ -1.79
YKT6YKL196C VTC3Q02725 835 aa3.85□□□□□ -1.79
YKT6YKL196C HEL2Q05580 639 aaKnown RBP3.85□□□□□ -1.79
YKT6YKL196C ENT2Q05785 613 aa3.85□□□□□ -1.79
YKT6YKL196C YPR172WQ06608 200 aa3.85□□□□□ -1.79
YKT6YKL196C RUD3Q12234 484 aaKnown RBP3.85□□□□□ -1.79
YKT6YKL196C SRD1P09007 221 aa3.84□□□□□ -1.79
YKT6YKL196C RAD18P10862 487 aa3.84□□□□□ -1.79
YKT6YKL196C MAL31P38156 614 aa3.84□□□□□ -1.79
YKT6YKL196C FMO1P38866 432 aa3.84□□□□□ -1.79
YKT6YKL196C RPN10P38886 268 aaKnown RBP3.84□□□□□ -1.79
YKT6YKL196C SWD1P39706 426 aa3.84□□□□□ -1.79
YKT6YKL196C GPI8P49018 411 aa3.84□□□□□ -1.79
YKT6YKL196C YBP2P53169 641 aa3.84□□□□□ -1.79
YKT6YKL196C BTN2P53286 410 aa3.84□□□□□ -1.79
YKT6YKL196C DSL1P53847 754 aa3.84□□□□□ -1.79
YKT6YKL196C ARG5,6Q01217 863 aa3.84□□□□□ -1.79
YKT6YKL196C LEE1Q02799 301 aaKnown RBP3.84□□□□□ -1.79
YKT6YKL196C RRB1Q04225 511 aaKnown RBP3.84□□□□□ -1.79
YKT6YKL196C YOR389WQ08912 624 aa3.84□□□□□ -1.79
YKT6YKL196C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
YKT6YKL196C LSP1Q12230 341 aaKnown RBP3.84□□□□□ -1.79
YKT6YKL196C ATG11Q12527 1178 aa3.84□□□□□ -1.79
YKT6YKL196C KAR3P17119 729 aa3.83□□□□□ -1.8
YKT6YKL196C GSY1P23337 708 aa3.83□□□□□ -1.8
YKT6YKL196C HOG1P32485 435 aa3.83□□□□□ -1.8
YKT6YKL196C ARC19P33204 171 aaKnown RBP3.83□□□□□ -1.8
YKT6YKL196C NIP100P33420 868 aa3.83□□□□□ -1.8
YKT6YKL196C YPT53P36019 220 aa3.83□□□□□ -1.8
YKT6YKL196C VPS24P36095 224 aaKnown RBP3.83□□□□□ -1.8
YKT6YKL196C CBR1P38626 284 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms