RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C VBA3P25594 458 aa14.18□□□□□ -0.14
SHU1YHL006C APL1P27351 700 aa14.18□□□□□ -0.14
SHU1YHL006C VBA5P36172 582 aa14.18□□□□□ -0.14
SHU1YHL006C POL12P38121 705 aaPredicted RBP14.18□□□□□ -0.14
SHU1YHL006C NPR3P38742 1146 aa14.18□□□□□ -0.14
SHU1YHL006C RVS167P39743 482 aaKnown RBP14.18□□□□□ -0.14
SHU1YHL006C BTT1P40314 149 aaPredicted RBP14.18□□□□□ -0.14
SHU1YHL006C CEG1Q01159 459 aaPredicted RBP14.18□□□□□ -0.14
SHU1YHL006C CSR1Q06705 408 aaKnown RBP14.18□□□□□ -0.14
SHU1YHL006C NDJ1Q12366 352 aa14.18□□□□□ -0.14
SHU1YHL006C PDH1Q12428 516 aaKnown RBP14.18□□□□□ -0.14
SHU1YHL006C AI5_BETAQ9ZZX0 354 aa14.18□□□□□ -0.14
SHU1YHL006C RRM3P38766 723 aa14.17□□□□□ -0.14
SHU1YHL006C RSM25P40496 264 aa14.17□□□□□ -0.14
SHU1YHL006C GCN5Q03330 439 aa14.17□□□□□ -0.14
SHU1YHL006C GFD1Q04839 188 aaKnown RBP14.17□□□□□ -0.14
SHU1YHL006C MTF1P14908 341 aaKnown RBP14.16□□□□□ -0.14
SHU1YHL006C PPH22P23595 377 aa14.16□□□□□ -0.14
SHU1YHL006C DAL2P25335 343 aa14.16□□□□□ -0.14
SHU1YHL006C YET1P35723 206 aa14.16□□□□□ -0.14
SHU1YHL006C BCH2P36122 765 aa14.16□□□□□ -0.14
SHU1YHL006C HXT5P38695 592 aa14.16□□□□□ -0.14
SHU1YHL006C IES1P43579 692 aa14.16□□□□□ -0.14
SHU1YHL006C NSE1Q07913 336 aa14.16□□□□□ -0.14
SHU1YHL006C KIP1P28742 1111 aa14.15□□□□□ -0.14
SHU1YHL006C SEG2P34250 1132 aa14.15□□□□□ -0.14
SHU1YHL006C EFM2P38347 419 aa14.15□□□□□ -0.14
SHU1YHL006C RAD55P38953 406 aa14.15□□□□□ -0.14
SHU1YHL006C SHQ1P40486 507 aaPredicted RBP14.15□□□□□ -0.14
SHU1YHL006C KRE33P53914 1056 aaKnown RBP14.15□□□□□ -0.14
SHU1YHL006C TMN2Q04562 672 aa14.15□□□□□ -0.14
SHU1YHL006C LRE1P25579 583 aaKnown RBP14.14□□□□□ -0.15
SHU1YHL006C MED6P38782 295 aa14.14□□□□□ -0.15
SHU1YHL006C FHL1P39521 936 aa14.14□□□□□ -0.15
SHU1YHL006C YGL036WP53185 909 aaPredicted RBP14.14□□□□□ -0.15
SHU1YHL006C DRN1P53255 507 aaKnown RBP14.14□□□□□ -0.15
SHU1YHL006C CSG2P35206 410 aa14.13□□□□□ -0.15
SHU1YHL006C PSY4P38193 441 aa14.13□□□□□ -0.15
SHU1YHL006C YBR225WP38321 900 aa14.13□□□□□ -0.15
SHU1YHL006C AVT2P39981 480 aa14.13□□□□□ -0.15
SHU1YHL006C ECM22Q05958 814 aaPredicted RBP14.13□□□□□ -0.15
SHU1YHL006C NOP4P37838 685 aaKnown RBP14.12□□□□□ -0.15
SHU1YHL006C GUF1P46943 645 aa14.12□□□□□ -0.15
SHU1YHL006C ASG7P46993 209 aa14.12□□□□□ -0.15
SHU1YHL006C TUB4P53378 473 aa14.12□□□□□ -0.15
SHU1YHL006C TMA16Q08687 178 aa14.12□□□□□ -0.15
SHU1YHL006C TRE1Q08919 783 aa14.12□□□□□ -0.15
SHU1YHL006C DDC1Q08949 612 aa14.12□□□□□ -0.15
SHU1YHL006C NBP2Q12163 236 aa14.12□□□□□ -0.15
SHU1YHL006C DAL1P32375 460 aa14.11□□□□□ -0.15
SHU1YHL006C DSS4P32601 143 aa14.11□□□□□ -0.15
SHU1YHL006C NUP60P39705 539 aa14.11□□□□□ -0.15
SHU1YHL006C ATH1P48016 1211 aa14.11□□□□□ -0.15
SHU1YHL006C CWC2Q12046 339 aaPredicted RBP14.11□□□□□ -0.15
SHU1YHL006C YBL036CP38197 257 aa14.1□□□□□ -0.15
SHU1YHL006C CDC1P40986 491 aa14.1□□□□□ -0.15
SHU1YHL006C MND1P53102 219 aa14.1□□□□□ -0.15
SHU1YHL006C MTD1Q02046 320 aaKnown RBP14.1□□□□□ -0.15
SHU1YHL006C RCL1Q08096 367 aaPredicted RBP14.1□□□□□ -0.15
SHU1YHL006C MRM1P25270 412 aa14.09□□□□□ -0.15
SHU1YHL006C RPN12P32496 274 aa14.09□□□□□ -0.15
SHU1YHL006C MIP6P38760 659 aaKnown RBP14.09□□□□□ -0.15
SHU1YHL006C DYS1P38791 387 aa14.09□□□□□ -0.15
SHU1YHL006C VPS70P47161 811 aa14.09□□□□□ -0.15
SHU1YHL006C YNR061CP53747 219 aa14.09□□□□□ -0.15
SHU1YHL006C VPS54Q12071 889 aa14.09□□□□□ -0.15
SHU1YHL006C MEX67Q99257 599 aaKnown RBP14.09□□□□□ -0.15
SHU1YHL006C BEM2P39960 2167 aaKnown RBP14.09□□□□□ -0.15
SHU1YHL006C FUS1P11710 512 aa14.08□□□□□ -0.16
SHU1YHL006C HCM1P25364 564 aa14.08□□□□□ -0.16
SHU1YHL006C PDC6P26263 563 aaKnown RBP14.08□□□□□ -0.16
SHU1YHL006C PFD1P46988 109 aa14.08□□□□□ -0.16
SHU1YHL006C GPD1Q00055 391 aaKnown RBP14.08□□□□□ -0.16
SHU1YHL006C MSP1P28737 362 aa14.07□□□□□ -0.16
SHU1YHL006C ECM32P32644 1121 aaKnown RBP14.07□□□□□ -0.16
SHU1YHL006C XRS2P33301 854 aa14.07□□□□□ -0.16
SHU1YHL006C YMC2P38087 329 aa14.07□□□□□ -0.16
SHU1YHL006C YIL161WP40449 235 aaKnown RBP14.07□□□□□ -0.16
SHU1YHL006C GYP8P43570 497 aa14.07□□□□□ -0.16
SHU1YHL006C FMP27Q06179 2628 aa14.07□□□□□ -0.16
SHU1YHL006C SHM1P37292 490 aaPredicted RBP14.06□□□□□ -0.16
SHU1YHL006C NEM1P38757 446 aa14.06□□□□□ -0.16
SHU1YHL006C SPT8P38915 602 aa14.06□□□□□ -0.16
SHU1YHL006C CHS6P40955 746 aa14.06□□□□□ -0.16
SHU1YHL006C FAA4P47912 694 aaKnown RBP14.06□□□□□ -0.16
SHU1YHL006C YML082WQ04533 649 aaKnown RBP14.06□□□□□ -0.16
SHU1YHL006C HRD3Q05787 833 aa14.06□□□□□ -0.16
SHU1YHL006C TRP2P00899 507 aaKnown RBP14.05□□□□□ -0.16
SHU1YHL006C CAN1P04817 590 aa14.05□□□□□ -0.16
SHU1YHL006C PPR1P07272 904 aaPredicted RBP14.05□□□□□ -0.16
SHU1YHL006C RPS6AP0CX37 236 aaKnown RBP14.05□□□□□ -0.16
SHU1YHL006C RPS6BP0CX38 236 aaPredicted RBP14.05□□□□□ -0.16
SHU1YHL006C ATE1P16639 503 aa14.05□□□□□ -0.16
SHU1YHL006C RPT2P40327 437 aaKnown RBP14.05□□□□□ -0.16
SHU1YHL006C SDS3P40505 327 aa14.05□□□□□ -0.16
SHU1YHL006C LSB3P43603 459 aaKnown RBP14.05□□□□□ -0.16
SHU1YHL006C ESBP6P53918 673 aa14.05□□□□□ -0.16
SHU1YHL006C SSL2Q00578 843 aa14.05□□□□□ -0.16
SHU1YHL006C YPL062WQ02781 134 aa14.05□□□□□ -0.16
SHU1YHL006C YER152CP10356 443 aa14.04□□□□□ -0.16
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms