RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C NSI1Q12457 570 aa3.65□□□□□ -1.83
SPT4YGR063C HXK1P04806 485 aaKnown RBP3.64□□□□□ -1.83
SPT4YGR063C RPL6BP05739 176 aaKnown RBP3.64□□□□□ -1.83
SPT4YGR063C ILS1P09436 1072 aaKnown RBP3.64□□□□□ -1.83
SPT4YGR063C RPS6AP0CX37 236 aaKnown RBP3.64□□□□□ -1.83
SPT4YGR063C RPS6BP0CX38 236 aaPredicted RBP3.64□□□□□ -1.83
SPT4YGR063C KIN2P13186 1147 aaKnown RBP3.64□□□□□ -1.83
SPT4YGR063C YAK1P14680 807 aa3.64□□□□□ -1.83
SPT4YGR063C CMP2P14747 604 aa3.64□□□□□ -1.83
SPT4YGR063C VMA2P16140 517 aaKnown RBP3.64□□□□□ -1.83
SPT4YGR063C MER1P16523 270 aa3.64□□□□□ -1.83
SPT4YGR063C SPO12P17123 173 aa3.64□□□□□ -1.83
SPT4YGR063C SEC18P18759 758 aaKnown RBP3.64□□□□□ -1.83
SPT4YGR063C DAP2P18962 818 aa3.64□□□□□ -1.83
SPT4YGR063C CBP3P21560 335 aa3.64□□□□□ -1.83
SPT4YGR063C RPA135P22138 1203 aaKnown RBP3.64□□□□□ -1.83
SPT4YGR063C KIN3P22209 435 aa3.64□□□□□ -1.83
SPT4YGR063C RPC53P25441 422 aa3.64□□□□□ -1.83
SPT4YGR063C PEP3P27801 918 aa3.64□□□□□ -1.83
SPT4YGR063C RAD24P32641 659 aa3.64□□□□□ -1.83
SPT4YGR063C CPR5P35176 225 aa3.64□□□□□ -1.83
SPT4YGR063C CLG1P35190 452 aa3.64□□□□□ -1.83
SPT4YGR063C YET1P35723 206 aa3.64□□□□□ -1.83
SPT4YGR063C BLI1P35727 113 aa3.64□□□□□ -1.83
SPT4YGR063C BCD1P38772 366 aa3.64□□□□□ -1.83
SPT4YGR063C LSM12P38828 187 aaKnown RBP3.64□□□□□ -1.83
SPT4YGR063C SOL3P38858 249 aa3.64□□□□□ -1.83
SPT4YGR063C SWD1P39706 426 aa3.64□□□□□ -1.83
SPT4YGR063C RLP7P40693 322 aaKnown RBP3.64□□□□□ -1.83
SPT4YGR063C DIM1P41819 318 aaKnown RBP3.64□□□□□ -1.83
SPT4YGR063C GNP1P48813 663 aa3.64□□□□□ -1.83
SPT4YGR063C ATP22P50273 684 aaPredicted RBP3.64□□□□□ -1.83
SPT4YGR063C NUP84P52891 726 aa3.64□□□□□ -1.83
SPT4YGR063C YGL108CP53139 140 aa3.64□□□□□ -1.83
SPT4YGR063C PTA1Q01329 785 aaPredicted RBP3.64□□□□□ -1.83
SPT4YGR063C INA17Q02888 182 aa3.64□□□□□ -1.83
SPT4YGR063C ABZ2Q03266 374 aa3.64□□□□□ -1.83
SPT4YGR063C YDR239CQ03780 787 aa3.64□□□□□ -1.83
SPT4YGR063C URH1Q04179 340 aa3.64□□□□□ -1.83
SPT4YGR063C URC2Q04411 772 aa3.64□□□□□ -1.83
SPT4YGR063C COA4Q05809 96 aa3.64□□□□□ -1.83
SPT4YGR063C VPS36Q06696 566 aa3.64□□□□□ -1.83
SPT4YGR063C CSR1Q06705 408 aaKnown RBP3.64□□□□□ -1.83
SPT4YGR063C SIL1Q08199 421 aa3.64□□□□□ -1.83
SPT4YGR063C AVO1Q08236 1176 aa3.64□□□□□ -1.83
SPT4YGR063C RPN8Q08723 338 aaKnown RBP3.64□□□□□ -1.83
SPT4YGR063C YPL277CQ08989 487 aa3.64□□□□□ -1.83
SPT4YGR063C MED4Q12343 284 aa3.64□□□□□ -1.83
SPT4YGR063C SNU66Q12420 587 aaPredicted RBP3.64□□□□□ -1.83
SPT4YGR063C TCB1Q12466 1186 aa3.64□□□□□ -1.83
SPT4YGR063C NCB2Q92317 146 aa3.64□□□□□ -1.83
SPT4YGR063C ADR1P07248 1323 aa3.64□□□□□ -1.83
SPT4YGR063C YLR278CQ05854 1341 aa3.64□□□□□ -1.83
SPT4YGR063C TY1B-NL2Q99337 1749 aaKnown RBP3.64□□□□□ -1.83
SPT4YGR063C RPL24AP04449 155 aaKnown RBP3.63□□□□□ -1.83
SPT4YGR063C HSP60P19882 572 aaKnown RBP3.63□□□□□ -1.83
SPT4YGR063C VPS3P23643 1011 aa3.63□□□□□ -1.83
SPT4YGR063C MCM3P24279 971 aaKnown RBP3.63□□□□□ -1.83
SPT4YGR063C PKC1P24583 1151 aa3.63□□□□□ -1.83
SPT4YGR063C KTR1P27810 393 aaKnown RBP3.63□□□□□ -1.83
SPT4YGR063C PPH3P32345 308 aa3.63□□□□□ -1.83
SPT4YGR063C EUG1P32474 517 aa3.63□□□□□ -1.83
SPT4YGR063C FRD1P32614 470 aaKnown RBP3.63□□□□□ -1.83
SPT4YGR063C RPT5P33297 434 aaKnown RBP3.63□□□□□ -1.83
SPT4YGR063C LRG1P35688 1017 aa3.63□□□□□ -1.83
SPT4YGR063C VPS51P36116 164 aa3.63□□□□□ -1.83
SPT4YGR063C GEF1P37020 779 aa3.63□□□□□ -1.83
SPT4YGR063C MAK5P38112 773 aaPredicted RBP3.63□□□□□ -1.83
SPT4YGR063C SLX1P38324 304 aa3.63□□□□□ -1.83
SPT4YGR063C YBR287WP38355 427 aa3.63□□□□□ -1.83
SPT4YGR063C RFC3P38629 340 aa3.63□□□□□ -1.83
SPT4YGR063C GOS1P38736 223 aa3.63□□□□□ -1.83
SPT4YGR063C SSF1P38789 453 aaPredicted RBP3.63□□□□□ -1.83
SPT4YGR063C SMC2P38989 1170 aaKnown RBP3.63□□□□□ -1.83
SPT4YGR063C YER186CP40101 306 aa3.63□□□□□ -1.83
SPT4YGR063C YNL320WP42840 284 aa3.63□□□□□ -1.83
SPT4YGR063C BFA1P47113 574 aa3.63□□□□□ -1.83
SPT4YGR063C ENT3P47160 408 aa3.63□□□□□ -1.83
SPT4YGR063C MIG2P53035 382 aa3.63□□□□□ -1.83
SPT4YGR063C ZIP2P53061 704 aa3.63□□□□□ -1.83
SPT4YGR063C ATG1P53104 897 aa3.63□□□□□ -1.83
SPT4YGR063C MLC1P53141 149 aa3.63□□□□□ -1.83
SPT4YGR063C YGR273CP53329 174 aa3.63□□□□□ -1.83
SPT4YGR063C YNR063WP53749 607 aa3.63□□□□□ -1.83
SPT4YGR063C ORC3P54790 616 aa3.63□□□□□ -1.83
SPT4YGR063C ORC4P54791 529 aa3.63□□□□□ -1.83
SPT4YGR063C MMT1Q03218 510 aa3.63□□□□□ -1.83
SPT4YGR063C FCP1Q03254 732 aa3.63□□□□□ -1.83
SPT4YGR063C MTC5Q03897 1148 aa3.63□□□□□ -1.83
SPT4YGR063C RAD30Q04049 632 aa3.63□□□□□ -1.83
SPT4YGR063C SOV1Q04748 898 aa3.63□□□□□ -1.83
SPT4YGR063C DXO1Q06349 442 aa3.63□□□□□ -1.83
SPT4YGR063C TDA5Q06417 326 aaKnown RBP3.63□□□□□ -1.83
SPT4YGR063C YEH2Q07950 538 aa3.63□□□□□ -1.83
SPT4YGR063C ICL2Q12031 575 aa3.63□□□□□ -1.83
SPT4YGR063C VPS54Q12071 889 aa3.63□□□□□ -1.83
SPT4YGR063C BAG7Q12128 409 aa3.63□□□□□ -1.83
SPT4YGR063C SNU23Q12368 194 aaPredicted RBP3.63□□□□□ -1.83
SPT4YGR063C COQ4O13525 335 aa3.62□□□□□ -1.83
SPT4YGR063C CDC19P00549 500 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms