RNA–Protein interactions for RNA: YGR039W

YGR039W, Transcript of Dubious open reading frame, yeast

Gene YGR039W, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGR039W	YGR039W	PGI1	P12709	554 aa	Known RBP	3.93	□□□□□ -1.78
YGR039W	YGR039W	GSY1	P23337	708 aa		3.93	□□□□□ -1.78
YGR039W	YGR039W	PCL2	P25693	308 aa		3.93	□□□□□ -1.78
YGR039W	YGR039W	DPB3	P27344	201 aa		3.93	□□□□□ -1.78
YGR039W	YGR039W	TYS1	P36421	394 aa	Known RBP	3.93	□□□□□ -1.78
YGR039W	YGR039W	TDP1	P38319	544 aa		3.93	□□□□□ -1.78
YGR039W	YGR039W	BCD1	P38772	366 aa		3.93	□□□□□ -1.78
YGR039W	YGR039W	ALG2	P43636	503 aa		3.93	□□□□□ -1.78
YGR039W	YGR039W	TY4A-J	P47023	414 aa		3.93	□□□□□ -1.78
YGR039W	YGR039W	UBX4	P54730	416 aa		3.93	□□□□□ -1.78
YGR039W	YGR039W	ATP25	Q03153	612 aa		3.93	□□□□□ -1.78
YGR039W	YGR039W	TRE2	Q08693	809 aa		3.93	□□□□□ -1.78
YGR039W	YGR039W	YBR182C-A	Q8TGU6	64 aa		3.93	□□□□□ -1.78
YGR039W	YGR039W	SRD1	P09007	221 aa		3.92	□□□□□ -1.78
YGR039W	YGR039W	CDC43	P18898	376 aa		3.92	□□□□□ -1.78
YGR039W	YGR039W	SPC29	P33419	253 aa		3.92	□□□□□ -1.78
YGR039W	YGR039W	YEL1	P34225	687 aa		3.92	□□□□□ -1.78
YGR039W	YGR039W	TRZ1	P36159	838 aa	Predicted RBP	3.92	□□□□□ -1.78
YGR039W	YGR039W	RRP8	P38961	392 aa	Known RBP	3.92	□□□□□ -1.78
YGR039W	YGR039W	ERP2	P39704	215 aa		3.92	□□□□□ -1.78
YGR039W	YGR039W	HOS4	P40480	1083 aa		3.92	□□□□□ -1.78
YGR039W	YGR039W	TAH11	P47112	604 aa		3.92	□□□□□ -1.78
YGR039W	YGR039W	YJR096W	P47137	282 aa		3.92	□□□□□ -1.78
YGR039W	YGR039W	TEL2	P53038	688 aa		3.92	□□□□□ -1.78
YGR039W	YGR039W	MET13	P53128	600 aa		3.92	□□□□□ -1.78
YGR039W	YGR039W	VPS73	P53142	486 aa	Known RBP	3.92	□□□□□ -1.78
YGR039W	YGR039W	MET14	Q02196	202 aa		3.92	□□□□□ -1.78
YGR039W	YGR039W	YDR514C	Q04408	483 aa		3.92	□□□□□ -1.78
YGR039W	YGR039W	HFD1	Q04458	532 aa		3.92	□□□□□ -1.78
YGR039W	YGR039W	BRE1	Q07457	700 aa	Known RBP	3.92	□□□□□ -1.78
YGR039W	YGR039W	MET7	Q08645	548 aa		3.92	□□□□□ -1.78
YGR039W	YGR039W	NYV1	Q12255	253 aa		3.92	□□□□□ -1.78
YGR039W	YGR039W	YEF3	P16521	1044 aa	Known RBP	3.91	□□□□□ -1.78
YGR039W	YGR039W	HCA4	P20448	770 aa	Known RBP	3.91	□□□□□ -1.78
YGR039W	YGR039W	TFC4	P33339	1025 aa		3.91	□□□□□ -1.78
YGR039W	YGR039W	YBR259W	P38338	688 aa		3.91	□□□□□ -1.78
YGR039W	YGR039W	ECM1	P39715	212 aa		3.91	□□□□□ -1.78
YGR039W	YGR039W	BAP3	P41815	604 aa		3.91	□□□□□ -1.78
YGR039W	YGR039W	HXT16	P47185	567 aa		3.91	□□□□□ -1.78
YGR039W	YGR039W	UBC11	P52492	156 aa		3.91	□□□□□ -1.78
YGR039W	YGR039W	PIP2	P52960	996 aa		3.91	□□□□□ -1.78
YGR039W	YGR039W	ZIP2	P53061	704 aa		3.91	□□□□□ -1.78
YGR039W	YGR039W	SPC105	P53148	917 aa		3.91	□□□□□ -1.78
YGR039W	YGR039W	SSL2	Q00578	843 aa		3.91	□□□□□ -1.78
YGR039W	YGR039W	ASM4	Q05166	528 aa		3.91	□□□□□ -1.78
YGR039W	YGR039W	COG4	Q06096	861 aa		3.91	□□□□□ -1.78
YGR039W	YGR039W	BNR1	P40450	1375 aa		3.9	□□□□□ -1.78
YGR039W	YGR039W	RAD18	P10862	487 aa		3.9	□□□□□ -1.79
YGR039W	YGR039W	SFL1	P20134	766 aa		3.9	□□□□□ -1.79
YGR039W	YGR039W	KIN3	P22209	435 aa		3.9	□□□□□ -1.79
YGR039W	YGR039W	HIS7	P33734	552 aa	Known RBP	3.9	□□□□□ -1.79
YGR039W	YGR039W	MTC2	P34246	357 aa		3.9	□□□□□ -1.79
YGR039W	YGR039W	DUG1	P43616	481 aa	Known RBP	3.9	□□□□□ -1.79
YGR039W	YGR039W	NIT2	P47016	307 aa		3.9	□□□□□ -1.79
YGR039W	YGR039W	MTR3	P48240	250 aa	Predicted RBP	3.9	□□□□□ -1.79
YGR039W	YGR039W	MDG1	P53885	366 aa		3.9	□□□□□ -1.79
YGR039W	YGR039W	SMX3	P54999	86 aa	Predicted RBP	3.9	□□□□□ -1.79
YGR039W	YGR039W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.89	□□□□□ -1.79	not detected
YGR039W	YGR039W	SIR3	P06701	978 aa		3.89	□□□□□ -1.79
YGR039W	YGR039W	ILV6	P25605	309 aa	Known RBP	3.89	□□□□□ -1.79
YGR039W	YGR039W	PCM1	P38628	557 aa	Known RBP	3.89	□□□□□ -1.79
YGR039W	YGR039W	OAF1	P39720	1047 aa	Predicted RBP	3.89	□□□□□ -1.79
YGR039W	YGR039W	RLP7	P40693	322 aa	Known RBP	3.89	□□□□□ -1.79
YGR039W	YGR039W	SHR5	P41912	237 aa		3.89	□□□□□ -1.79
YGR039W	YGR039W	IMO32	P53219	342 aa		3.89	□□□□□ -1.79
YGR039W	YGR039W	YAP1802	P53309	568 aa		3.89	□□□□□ -1.79
YGR039W	YGR039W	TEX1	P53851	422 aa	Known RBP	3.89	□□□□□ -1.79
YGR039W	YGR039W	GAD1	Q04792	585 aa		3.89	□□□□□ -1.79
YGR039W	YGR039W	DIF1	O13577	133 aa		3.88	□□□□□ -1.79
YGR039W	YGR039W	GAL1	P04385	528 aa		3.88	□□□□□ -1.79
YGR039W	YGR039W	TUB1	P09733	447 aa	Known RBP	3.88	□□□□□ -1.79
YGR039W	YGR039W	DMC1	P25453	334 aa		3.88	□□□□□ -1.79
YGR039W	YGR039W	PRP19	P32523	503 aa	Known RBP	3.88	□□□□□ -1.79
YGR039W	YGR039W	PPZ2	P33329	710 aa		3.88	□□□□□ -1.79
YGR039W	YGR039W	MCD4	P36051	919 aa		3.88	□□□□□ -1.79
YGR039W	YGR039W	RIX1	P38883	763 aa	Predicted RBP	3.88	□□□□□ -1.79
YGR039W	YGR039W	YIL166C	P40445	542 aa		3.88	□□□□□ -1.79
YGR039W	YGR039W	CAF16	P43569	289 aa		3.88	□□□□□ -1.79
YGR039W	YGR039W	RSC8	P43609	557 aa	Known RBP	3.88	□□□□□ -1.79
YGR039W	YGR039W	COG8	Q04632	607 aa		3.88	□□□□□ -1.79
YGR039W	YGR039W	COQ11	Q05892	277 aa		3.88	□□□□□ -1.79
YGR039W	YGR039W	YTM1	Q12024	460 aa	Predicted RBP	3.88	□□□□□ -1.79
YGR039W	YGR039W	HMG1	P12683	1054 aa		3.87	□□□□□ -1.79
YGR039W	YGR039W	PTP2	P29461	750 aa		3.87	□□□□□ -1.79
YGR039W	YGR039W	PEX2	P32800	271 aa		3.87	□□□□□ -1.79
YGR039W	YGR039W	MPE1	P35728	441 aa	Known RBP	3.87	□□□□□ -1.79
YGR039W	YGR039W	CBR1	P38626	284 aa	Known RBP	3.87	□□□□□ -1.79
YGR039W	YGR039W	CKB2	P38930	258 aa		3.87	□□□□□ -1.79
YGR039W	YGR039W	CCT3	P39077	534 aa	Known RBP	3.87	□□□□□ -1.79
YGR039W	YGR039W	GPP2	P40106	250 aa	Known RBP	3.87	□□□□□ -1.79
YGR039W	YGR039W	VID27	P40157	782 aa		3.87	□□□□□ -1.79
YGR039W	YGR039W	SNM1	P40993	198 aa		3.87	□□□□□ -1.79
YGR039W	YGR039W	GZF3	P42944	551 aa	Known RBP	3.87	□□□□□ -1.79
YGR039W	YGR039W	ATG33	Q06485	197 aa		3.87	□□□□□ -1.79
YGR039W	YGR039W	MLC2	Q06580	163 aa		3.87	□□□□□ -1.79
YGR039W	YGR039W	GUD1	Q07729	489 aa		3.87	□□□□□ -1.79
YGR039W	YGR039W	RRP6	Q12149	733 aa	Known RBP	3.87	□□□□□ -1.79
YGR039W	YGR039W	TAF3	Q12297	353 aa		3.87	□□□□□ -1.79
YGR039W	YGR039W	AEP2	P22136	580 aa		3.86	□□□□□ -1.79
YGR039W	YGR039W	ADY2	P25613	283 aa		3.86	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 243.3 ms