RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W LCP5P40079 357 aaPredicted RBP5.8□□□□□ -1.48
SHE10YGL228W PSY2P40164 858 aa5.8□□□□□ -1.48
SHE10YGL228W ESL1P40456 1118 aa5.8□□□□□ -1.48
SHE10YGL228W ASG1P40467 964 aa5.8□□□□□ -1.48
SHE10YGL228W PRP31P49704 494 aaPredicted RBP5.8□□□□□ -1.48
SHE10YGL228W FOL2P51601 243 aaKnown RBP5.8□□□□□ -1.48
SHE10YGL228W YGR035CP53222 116 aa5.8□□□□□ -1.48
SHE10YGL228W CWC22P53333 577 aaKnown RBP5.8□□□□□ -1.48
SHE10YGL228W YOR059CQ08448 450 aaKnown RBP5.8□□□□□ -1.48
SHE10YGL228W TAO3P40468 2376 aa5.8□□□□□ -1.48
SHE10YGL228W CYS3P31373 394 aaKnown RBP5.79□□□□□ -1.48
SHE10YGL228W MRP4P32902 394 aa5.79□□□□□ -1.48
SHE10YGL228W BUD2P33314 1104 aa5.79□□□□□ -1.48
SHE10YGL228W QNS1P38795 714 aaKnown RBP5.79□□□□□ -1.48
SHE10YGL228W GEM1P39722 662 aa5.79□□□□□ -1.48
SHE10YGL228W STP1Q00947 519 aa5.79□□□□□ -1.48
SHE10YGL228W MZM1Q03429 123 aaPredicted RBP5.79□□□□□ -1.48
SHE10YGL228W RCR2Q03446 210 aaKnown RBP5.79□□□□□ -1.48
SHE10YGL228W URH1Q04179 340 aa5.79□□□□□ -1.48
SHE10YGL228W NOP14Q99207 810 aaKnown RBP5.79□□□□□ -1.48
SHE10YGL228W YLR462WO13556 202 aa5.79□□□□□ -1.48
SHE10YGL228W EST1P17214 699 aaPredicted RBP5.79□□□□□ -1.48
SHE10YGL228W CAP1P28495 268 aaKnown RBP5.79□□□□□ -1.48
SHE10YGL228W CDC27P38042 758 aa5.79□□□□□ -1.48
SHE10YGL228W SLX1P38324 304 aa5.79□□□□□ -1.48
SHE10YGL228W YHL049CP38722 271 aa5.79□□□□□ -1.48
SHE10YGL228W FIR1P40020 876 aa5.79□□□□□ -1.48
SHE10YGL228W YER189WP40104 122 aa5.79□□□□□ -1.48
SHE10YGL228W RPT2P40327 437 aaKnown RBP5.79□□□□□ -1.48
SHE10YGL228W YFL064CP43540 174 aa5.79□□□□□ -1.48
SHE10YGL228W YJR054WP47114 497 aa5.79□□□□□ -1.48
SHE10YGL228W MND1P53102 219 aa5.79□□□□□ -1.48
SHE10YGL228W MAL13P53338 473 aa5.79□□□□□ -1.48
SHE10YGL228W SPC98P53540 846 aa5.79□□□□□ -1.48
SHE10YGL228W FMP30Q02883 468 aa5.79□□□□□ -1.48
SHE10YGL228W SPP1Q03012 353 aa5.79□□□□□ -1.48
SHE10YGL228W MUB1Q03162 620 aa5.79□□□□□ -1.48
SHE10YGL228W TRE1Q08919 783 aa5.79□□□□□ -1.48
SHE10YGL228W REC8Q12188 680 aa5.79□□□□□ -1.48
SHE10YGL228W PKH2Q12236 1081 aaKnown RBP5.79□□□□□ -1.48
SHE10YGL228W SPO21Q12411 609 aa5.79□□□□□ -1.48
SHE10YGL228W RMP1Q12530 201 aa5.79□□□□□ -1.48
SHE10YGL228W YBL111CQ3E7Y5 667 aa5.79□□□□□ -1.48
SHE10YGL228W TPK1P06244 397 aa5.78□□□□□ -1.48
SHE10YGL228W TIF1P10081 395 aaKnown RBP5.78□□□□□ -1.48
SHE10YGL228W ADK2P26364 225 aa5.78□□□□□ -1.48
SHE10YGL228W DBF4P32325 704 aa5.78□□□□□ -1.48
SHE10YGL228W YEL043WP32618 956 aa5.78□□□□□ -1.48
SHE10YGL228W FRE1P32791 686 aa5.78□□□□□ -1.48
SHE10YGL228W RIM101P33400 625 aa5.78□□□□□ -1.48
SHE10YGL228W ABZ1P37254 787 aaPredicted RBP5.78□□□□□ -1.48
SHE10YGL228W YBL036CP38197 257 aa5.78□□□□□ -1.48
SHE10YGL228W POA1P38218 177 aa5.78□□□□□ -1.48
SHE10YGL228W XDJ1P39102 459 aa5.78□□□□□ -1.48
SHE10YGL228W TMN3P40071 706 aa5.78□□□□□ -1.48
SHE10YGL228W SIP5P40210 489 aaKnown RBP5.78□□□□□ -1.48
SHE10YGL228W SPO74P45819 413 aa5.78□□□□□ -1.48
SHE10YGL228W POL31P46957 487 aa5.78□□□□□ -1.48
SHE10YGL228W YGR130CP53278 816 aa5.78□□□□□ -1.48
SHE10YGL228W NOP13P53883 403 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
SHE10YGL228W SLG1P54867 378 aa5.78□□□□□ -1.48
SHE10YGL228W ARO80Q04052 950 aa5.78□□□□□ -1.48
SHE10YGL228W ECI1Q05871 280 aa5.78□□□□□ -1.48
SHE10YGL228W ATG23Q06671 453 aa5.78□□□□□ -1.48
SHE10YGL228W ESC8Q08119 714 aa5.78□□□□□ -1.48
SHE10YGL228W VPS54Q12071 889 aa5.78□□□□□ -1.48
SHE10YGL228W EMP46Q12396 444 aa5.78□□□□□ -1.48
SHE10YGL228W HIP1P06775 603 aa5.77□□□□□ -1.49
SHE10YGL228W VPS3P23643 1011 aa5.77□□□□□ -1.49
SHE10YGL228W YBL055CP34220 418 aaPredicted RBP5.77□□□□□ -1.49
SHE10YGL228W SEG2P34250 1132 aa5.77□□□□□ -1.49
SHE10YGL228W NOP4P37838 685 aaKnown RBP5.77□□□□□ -1.49
SHE10YGL228W SPC72P39723 622 aa5.77□□□□□ -1.49
SHE10YGL228W DSE1P40077 573 aa5.77□□□□□ -1.49
SHE10YGL228W OPT1P40897 799 aa5.77□□□□□ -1.49
SHE10YGL228W RIM8P53179 542 aa5.77□□□□□ -1.49
SHE10YGL228W ATG16Q03818 150 aa5.77□□□□□ -1.49
SHE10YGL228W TIF35Q04067 274 aaKnown RBP5.77□□□□□ -1.49
SHE10YGL228W UFO1Q04511 668 aa5.77□□□□□ -1.49
SHE10YGL228W DIS3Q08162 1001 aaKnown RBP5.77□□□□□ -1.49
SHE10YGL228W JIP3O13555 125 aa5.77□□□□□ -1.49
SHE10YGL228W GAL80P04387 435 aa5.77□□□□□ -1.49
SHE10YGL228W ADE3P07245 946 aaKnown RBP5.77□□□□□ -1.49
SHE10YGL228W BIO2P32451 375 aa5.77□□□□□ -1.49
SHE10YGL228W GCG1P32656 232 aaKnown RBP5.77□□□□□ -1.49
SHE10YGL228W ABD1P32783 436 aaPredicted RBP5.77□□□□□ -1.49
SHE10YGL228W PEX2P32800 271 aa5.77□□□□□ -1.49
SHE10YGL228W GCS1P35197 352 aa5.77□□□□□ -1.49
SHE10YGL228W BYE1P36106 594 aa5.77□□□□□ -1.49
SHE10YGL228W CCL1P37366 393 aa5.77□□□□□ -1.49
SHE10YGL228W YMC2P38087 329 aa5.77□□□□□ -1.49
SHE10YGL228W CCT4P39078 528 aaKnown RBP5.77□□□□□ -1.49
SHE10YGL228W SNZ3P43545 298 aa5.77□□□□□ -1.49
SHE10YGL228W RPC17P47076 161 aa5.77□□□□□ -1.49
SHE10YGL228W HOP2P53187 214 aa5.77□□□□□ -1.49
SHE10YGL228W NOG2P53742 486 aaKnown RBP5.77□□□□□ -1.49
SHE10YGL228W SNZ2P53824 298 aa5.77□□□□□ -1.49
SHE10YGL228W YNL011CP53980 444 aa5.77□□□□□ -1.49
SHE10YGL228W VTI1Q04338 217 aa5.77□□□□□ -1.49
SHE10YGL228W TDA9Q04545 1251 aa5.77□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms