RNA–Protein interactions for RNA: YGL050W

TYW3, Transcript of tRNA methyltransferase required for synthesis of wybutosine, yeast

Gene TYW3, Length 822 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TYW3	YGL050W	RPL19A	P0CX82	189 aa	Known RBP	5.22	□□□□□ -1.57
TYW3	YGL050W	RPL19B	P0CX83	189 aa	Predicted RBP	5.22	□□□□□ -1.57
TYW3	YGL050W	MATALPHA2	P0CY08	210 aa		5.22	□□□□□ -1.57
TYW3	YGL050W	HMLALPHA2	P0CY09	210 aa		5.22	□□□□□ -1.57
TYW3	YGL050W	EUG1	P32474	517 aa		5.22	□□□□□ -1.57
TYW3	YGL050W	BMH2	P34730	273 aa	Known RBP	5.22	□□□□□ -1.57
TYW3	YGL050W	RFC5	P38251	354 aa		5.22	□□□□□ -1.57
TYW3	YGL050W	YHL017W	P38745	532 aa		5.22	□□□□□ -1.57
TYW3	YGL050W	SPF1	P39986	1215 aa	Known RBP	5.22	□□□□□ -1.57
TYW3	YGL050W	NCS6	P53088	359 aa		5.22	□□□□□ -1.57
TYW3	YGL050W	SHE9	Q04172	456 aa		5.22	□□□□□ -1.57
TYW3	YGL050W	MYO5	Q04439	1219 aa	Known RBP	5.22	□□□□□ -1.57
TYW3	YGL050W	VIP1	Q06685	1146 aa	Known RBP	5.22	□□□□□ -1.57
TYW3	YGL050W	NBL1	Q3E7Y6	73 aa		5.22	□□□□□ -1.57
TYW3	YGL050W	CYC1	P00044	109 aa	Predicted RBP	5.21	□□□□□ -1.58
TYW3	YGL050W	RAD18	P10862	487 aa		5.21	□□□□□ -1.58
TYW3	YGL050W	IRC24	P40580	263 aa		5.21	□□□□□ -1.58
TYW3	YGL050W	EPL1	P43572	832 aa		5.21	□□□□□ -1.58
TYW3	YGL050W	ENV11	P53246	860 aa		5.21	□□□□□ -1.58
TYW3	YGL050W	BNI5	P53890	448 aa	Known RBP	5.21	□□□□□ -1.58
TYW3	YGL050W	HDA1	P53973	706 aa		5.21	□□□□□ -1.58
TYW3	YGL050W	MDM1	Q01846	1127 aa		5.21	□□□□□ -1.58
TYW3	YGL050W	CSM3	Q04659	317 aa		5.21	□□□□□ -1.58
TYW3	YGL050W	UBX5	Q06682	500 aa		5.21	□□□□□ -1.58
TYW3	YGL050W	MET7	Q08645	548 aa		5.21	□□□□□ -1.58
TYW3	YGL050W	TY1B-A	O13527	1196 aa	Known RBP	5.2	□□□□□ -1.58
TYW3	YGL050W	HSP82	P02829	709 aa	Known RBP	5.2	□□□□□ -1.58
TYW3	YGL050W	SRP40	P32583	406 aa	Predicted RBP	5.2	□□□□□ -1.58
TYW3	YGL050W	STE5	P32917	917 aa		5.2	□□□□□ -1.58
TYW3	YGL050W	PHO88	P38264	188 aa	Predicted RBP	5.2	□□□□□ -1.58
TYW3	YGL050W	RPN10	P38886	268 aa	Known RBP	5.2	□□□□□ -1.58
TYW3	YGL050W	CTF18	P49956	741 aa		5.2	□□□□□ -1.58
TYW3	YGL050W	HFM1	P51979	1187 aa		5.2	□□□□□ -1.58
TYW3	YGL050W	YGR125W	P53273	1036 aa		5.2	□□□□□ -1.58
TYW3	YGL050W	SNO2	P53823	222 aa		5.2	□□□□□ -1.58
TYW3	YGL050W	HRQ1	Q05549	1077 aa		5.2	□□□□□ -1.58
TYW3	YGL050W	SMD2	Q06217	110 aa	Known RBP	5.2	□□□□□ -1.58
TYW3	YGL050W	TDA5	Q06417	326 aa	Known RBP	5.2	□□□□□ -1.58
TYW3	YGL050W	DSE3	Q08729	430 aa		5.2	□□□□□ -1.58
TYW3	YGL050W	CEX1	Q12453	761 aa		5.2	□□□□□ -1.58
TYW3	YGL050W	SAM1	P10659	382 aa	Known RBP	5.19	□□□□□ -1.58
TYW3	YGL050W	BIK1	P11709	440 aa		5.19	□□□□□ -1.58
TYW3	YGL050W	UTR4	P32626	227 aa		5.19	□□□□□ -1.58
TYW3	YGL050W	RXT2	P38255	430 aa		5.19	□□□□□ -1.58
TYW3	YGL050W	AIM3	P38266	947 aa	Known RBP	5.19	□□□□□ -1.58
TYW3	YGL050W	TAT2	P38967	592 aa		5.19	□□□□□ -1.58
TYW3	YGL050W	SNF7	P39929	240 aa	Known RBP	5.19	□□□□□ -1.58
TYW3	YGL050W	PSF2	P40359	213 aa		5.19	□□□□□ -1.58
TYW3	YGL050W	FMS1	P50264	508 aa		5.19	□□□□□ -1.58
TYW3	YGL050W	PIL1	P53252	339 aa	Known RBP	5.19	□□□□□ -1.58
TYW3	YGL050W	PLB2	Q03674	706 aa		5.19	□□□□□ -1.58
TYW3	YGL050W	RSM24	Q03976	319 aa		5.19	□□□□□ -1.58
TYW3	YGL050W	VPS20	Q04272	221 aa		5.19	□□□□□ -1.58
TYW3	YGL050W	TIP41	Q12199	356 aa		5.19	□□□□□ -1.58
TYW3	YGL050W	GAL10	P04397	699 aa		5.18	□□□□□ -1.58
TYW3	YGL050W	MET6	P05694	767 aa	Known RBP	5.18	□□□□□ -1.58
TYW3	YGL050W	CMP2	P14747	604 aa		5.18	□□□□□ -1.58
TYW3	YGL050W	APL1	P27351	700 aa		5.18	□□□□□ -1.58
TYW3	YGL050W	PAH1	P32567	862 aa		5.18	□□□□□ -1.58
TYW3	YGL050W	RGT1	P32862	1170 aa		5.18	□□□□□ -1.58
TYW3	YGL050W	THI80	P35202	319 aa		5.18	□□□□□ -1.58
TYW3	YGL050W	CCT3	P39077	534 aa	Known RBP	5.18	□□□□□ -1.58
TYW3	YGL050W	YIR014W	P40570	242 aa		5.18	□□□□□ -1.58
TYW3	YGL050W	LIF1	P53150	421 aa		5.18	□□□□□ -1.58
TYW3	YGL050W	YGL081W	P53156	320 aa		5.18	□□□□□ -1.58
TYW3	YGL050W	RTC4	P53850	401 aa		5.18	□□□□□ -1.58
TYW3	YGL050W	SIZ1	Q04195	904 aa		5.18	□□□□□ -1.58
TYW3	YGL050W	YLH47	Q06493	454 aa		5.18	□□□□□ -1.58
TYW3	YGL050W	SUE1	Q06524	206 aa		5.18	□□□□□ -1.58
TYW3	YGL050W	TAO3	P40468	2376 aa		5.18	□□□□□ -1.58
TYW3	YGL050W	KIN2	P13186	1147 aa	Known RBP	5.17	□□□□□ -1.58
TYW3	YGL050W	PCT1	P13259	424 aa		5.17	□□□□□ -1.58
TYW3	YGL050W	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.17	□□□□□ -1.58	not detected
TYW3	YGL050W	THR4	P16120	514 aa	Known RBP	5.17	□□□□□ -1.58
TYW3	YGL050W	CBP3	P21560	335 aa		5.17	□□□□□ -1.58
TYW3	YGL050W	GSY1	P23337	708 aa		5.17	□□□□□ -1.58
TYW3	YGL050W	SWI4	P25302	1093 aa	Known RBP	5.17	□□□□□ -1.58
TYW3	YGL050W	MRP8	P35719	219 aa		5.17	□□□□□ -1.58
TYW3	YGL050W	SUL1	P38359	859 aa		5.17	□□□□□ -1.58
TYW3	YGL050W	LAM1	P38851	1228 aa		5.17	□□□□□ -1.58
TYW3	YGL050W	PCI8	P40512	444 aa		5.17	□□□□□ -1.58
TYW3	YGL050W	SLD5	Q03406	294 aa		5.17	□□□□□ -1.58
TYW3	YGL050W	BUL2	Q03758	920 aa	Known RBP	5.17	□□□□□ -1.58
TYW3	YGL050W	YDR132C	Q03900	495 aa		5.17	□□□□□ -1.58
TYW3	YGL050W	COG8	Q04632	607 aa		5.17	□□□□□ -1.58
TYW3	YGL050W	SPH1	Q06160	661 aa		5.17	□□□□□ -1.58
TYW3	YGL050W	XYL2	Q07993	356 aa		5.17	□□□□□ -1.58
TYW3	YGL050W	MDM38	Q08179	573 aa		5.17	□□□□□ -1.58
TYW3	YGL050W	YPL277C	Q08989	487 aa		5.17	□□□□□ -1.58
TYW3	YGL050W	ICL2	Q12031	575 aa		5.17	□□□□□ -1.58
TYW3	YGL050W	PGI1	P12709	554 aa	Known RBP	5.16	□□□□□ -1.58
TYW3	YGL050W	PRP6	P19735	899 aa	Predicted RBP	5.16	□□□□□ -1.58
TYW3	YGL050W	SRP54	P20424	541 aa	Known RBP	5.16	□□□□□ -1.58
TYW3	YGL050W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	not detected
TYW3	YGL050W	MCM4	P30665	933 aa	Known RBP	5.16	□□□□□ -1.58
TYW3	YGL050W	PRX1	P34227	261 aa	Known RBP	5.16	□□□□□ -1.58
TYW3	YGL050W	MCR1	P36060	302 aa	Known RBP	5.16	□□□□□ -1.58
TYW3	YGL050W	VPS24	P36095	224 aa	Known RBP	5.16	□□□□□ -1.58
TYW3	YGL050W	YBR184W	P38299	523 aa		5.16	□□□□□ -1.58
TYW3	YGL050W	UBP5	P39944	805 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms