RNA–Protein interactions for RNA: YDR477W

SNF1, Transcript of AMP-activated serine/threonine protein kinase, yeastyeast

Gene SNF1, Length 1,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF1YDR477W CTR1P49573 406 aa10.55□□□□□ -0.72
SNF1YDR477W DAK1P54838 584 aaKnown RBP10.55□□□□□ -0.72
SNF1YDR477W FLO11P08640 1367 aa10.55□□□□□ -0.72
SNF1YDR477W ADE2P21264 571 aaKnown RBP10.54□□□□□ -0.72
SNF1YDR477W DAL2P25335 343 aa10.54□□□□□ -0.72
SNF1YDR477W KAR4P25583 335 aa10.54□□□□□ -0.72
SNF1YDR477W RRP14P36080 434 aaKnown RBP10.54□□□□□ -0.72
SNF1YDR477W PDS1P40316 373 aaPredicted RBP10.54□□□□□ -0.72
SNF1YDR477W DPH1P40487 425 aaKnown RBP10.54□□□□□ -0.72
SNF1YDR477W PRK1P40494 810 aa10.54□□□□□ -0.72
SNF1YDR477W SHE10P53075 577 aa10.54□□□□□ -0.72
SNF1YDR477W HMO1Q03973 246 aaKnown RBP10.54□□□□□ -0.72
SNF1YDR477W YDL124WQ07551 312 aaKnown RBP10.54□□□□□ -0.72
SNF1YDR477W MET7Q08645 548 aa10.54□□□□□ -0.72
SNF1YDR477W PCL8Q08966 492 aa10.54□□□□□ -0.72
SNF1YDR477W SSC1P0CS90 654 aaKnown RBP10.54□□□□□ -0.72
SNF1YDR477W NAT1P12945 854 aaKnown RBP10.54□□□□□ -0.72
SNF1YDR477W EXO70P19658 623 aa10.54□□□□□ -0.72
SNF1YDR477W ESS1P22696 170 aa10.54□□□□□ -0.72
SNF1YDR477W CDC48P25694 835 aaKnown RBP10.54□□□□□ -0.72
SNF1YDR477W VPH2P32341 215 aa10.54□□□□□ -0.72
SNF1YDR477W KAR9P32526 644 aa10.54□□□□□ -0.72
SNF1YDR477W DSF2P38213 736 aa10.54□□□□□ -0.72
SNF1YDR477W SMF2P38778 549 aa10.54□□□□□ -0.72
SNF1YDR477W NUP60P39705 539 aa10.54□□□□□ -0.72
SNF1YDR477W WHI4Q07655 649 aaKnown RBP10.54□□□□□ -0.72
SNF1YDR477W TRE1Q08919 783 aa10.54□□□□□ -0.72
SNF1YDR477W ADE3P07245 946 aaKnown RBP10.53□□□□□ -0.72
SNF1YDR477W SBP1P10080 294 aaKnown RBP10.53□□□□□ -0.72
SNF1YDR477W YSC84P32793 468 aa10.53□□□□□ -0.72
SNF1YDR477W SEG2P34250 1132 aa10.53□□□□□ -0.72
SNF1YDR477W NUP120P35729 1037 aa10.53□□□□□ -0.72
SNF1YDR477W TOS1P38288 455 aa10.53□□□□□ -0.72
SNF1YDR477W TRM5P38793 499 aa10.53□□□□□ -0.72
SNF1YDR477W RPN3P40016 523 aaKnown RBP10.53□□□□□ -0.72
SNF1YDR477W INP52P50942 1183 aa10.53□□□□□ -0.72
SNF1YDR477W YGR016WP53209 190 aa10.53□□□□□ -0.72
SNF1YDR477W BIO4P53630 237 aa10.53□□□□□ -0.72
SNF1YDR477W CUR1Q06469 252 aa10.53□□□□□ -0.72
SNF1YDR477W PMS1P14242 873 aa10.52□□□□□ -0.72
SNF1YDR477W ERC1P38767 581 aa10.52□□□□□ -0.72
SNF1YDR477W YML6P51998 286 aa10.52□□□□□ -0.72
SNF1YDR477W PAN2P53010 1115 aaPredicted RBP10.52□□□□□ -0.72
SNF1YDR477W MIG2P53035 382 aa10.52□□□□□ -0.72
SNF1YDR477W KTR5P53966 522 aaPredicted RBP10.52□□□□□ -0.72
SNF1YDR477W NSE1Q07913 336 aa10.52□□□□□ -0.72
SNF1YDR477W DIA2Q08496 732 aaPredicted RBP10.52□□□□□ -0.72
SNF1YDR477W FAP7Q12055 197 aaPredicted RBP10.52□□□□□ -0.72
SNF1YDR477W URA4P20051 364 aa10.52□□□□□ -0.73
SNF1YDR477W MEF1P25039 761 aa10.52□□□□□ -0.73
SNF1YDR477W ADY2P25613 283 aa10.52□□□□□ -0.73
SNF1YDR477W HEM3P28789 327 aa10.52□□□□□ -0.73
SNF1YDR477W EFT1P32324 842 aaKnown RBP10.52□□□□□ -0.73
SNF1YDR477W NPL6P32832 435 aa10.52□□□□□ -0.73
SNF1YDR477W SEC6P32844 805 aa10.52□□□□□ -0.73
SNF1YDR477W PGM1P33401 570 aaKnown RBP10.52□□□□□ -0.73
SNF1YDR477W YKR078WP36158 585 aaKnown RBP10.52□□□□□ -0.73
SNF1YDR477W AMN1P38285 549 aaPredicted RBP10.52□□□□□ -0.73
SNF1YDR477W YJL107CP42947 387 aa10.52□□□□□ -0.73
SNF1YDR477W RPA49Q01080 415 aaPredicted RBP10.52□□□□□ -0.73
SNF1YDR477W DUS4Q06063 367 aa10.52□□□□□ -0.73
SNF1YDR477W TAF3Q12297 353 aa10.52□□□□□ -0.73
SNF1YDR477W MSB1P21339 1137 aaKnown RBP10.51□□□□□ -0.73
SNF1YDR477W RAD16P31244 790 aa10.51□□□□□ -0.73
SNF1YDR477W YSC83P32792 385 aa10.51□□□□□ -0.73
SNF1YDR477W NUF2P33895 451 aa10.51□□□□□ -0.73
SNF1YDR477W UBP11P36026 717 aa10.51□□□□□ -0.73
SNF1YDR477W TSC10P38342 320 aa10.51□□□□□ -0.73
SNF1YDR477W TEL2P53038 688 aa10.51□□□□□ -0.73
SNF1YDR477W YDR476CQ03362 224 aa10.51□□□□□ -0.73
SNF1YDR477W BUD22Q04347 519 aaKnown RBP10.51□□□□□ -0.73
SNF1YDR477W GRX6Q12438 231 aa10.51□□□□□ -0.73
SNF1YDR477W ILS1P09436 1072 aaKnown RBP10.5□□□□□ -0.73
SNF1YDR477W CDC24P11433 854 aaPredicted RBP10.5□□□□□ -0.73
SNF1YDR477W DGR2P32330 852 aa10.5□□□□□ -0.73
SNF1YDR477W SUV3P32580 737 aa10.5□□□□□ -0.73
SNF1YDR477W SIP2P34164 415 aaKnown RBP10.5□□□□□ -0.73
SNF1YDR477W KES1P35844 434 aaKnown RBP10.5□□□□□ -0.73
SNF1YDR477W PHO86P46956 311 aa10.5□□□□□ -0.73
SNF1YDR477W YGR125WP53273 1036 aa10.5□□□□□ -0.73
SNF1YDR477W GET4Q12125 312 aa10.5□□□□□ -0.73
SNF1YDR477W MDM20Q12387 796 aaKnown RBP10.5□□□□□ -0.73
SNF1YDR477W TUB3P09734 445 aaKnown RBP10.5□□□□□ -0.73
SNF1YDR477W SNT1P25357 1226 aa10.5□□□□□ -0.73
SNF1YDR477W RAD14P28519 371 aa10.5□□□□□ -0.73
SNF1YDR477W MUD1P32605 298 aaKnown RBP10.5□□□□□ -0.73
SNF1YDR477W YKU70P32807 602 aa10.5□□□□□ -0.73
SNF1YDR477W UGA4P32837 571 aa10.5□□□□□ -0.73
SNF1YDR477W BDF1P35817 686 aa10.5□□□□□ -0.73
SNF1YDR477W MRX3P38172 270 aa10.5□□□□□ -0.73
SNF1YDR477W PCA1P38360 1216 aa10.5□□□□□ -0.73
SNF1YDR477W PMC1P38929 1173 aaPredicted RBP10.5□□□□□ -0.73
SNF1YDR477W CDC73Q06697 393 aa10.5□□□□□ -0.73
SNF1YDR477W ACK1Q07622 623 aaPredicted RBP10.5□□□□□ -0.73
SNF1YDR477W YPR202WQ08993 238 aa10.5□□□□□ -0.73
SNF1YDR477W YDR018CQ12185 396 aa10.5□□□□□ -0.73
SNF1YDR477W SPE4Q12455 300 aa10.5□□□□□ -0.73
SNF1YDR477W NOT5Q12514 560 aaPredicted RBP10.5□□□□□ -0.73
SNF1YDR477W PGK1P00560 416 aaKnown RBP10.49□□□□□ -0.73
SNF1YDR477W PHR1P05066 565 aaKnown RBP RIP-Chip data10.49□□□□□ -0.73not detected
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms