RNA–Protein interactions for RNA: YDR200C

VPS64, Transcript of Protein required for cytoplasm to vacuole targeting of proteins, yeast

Gene VPS64, Length 1,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS64	YDR200C	SPH1	Q06160	661 aa		3.19	□□□□□ -1.9
VPS64	YDR200C	YDL177C	Q12257	170 aa		3.19	□□□□□ -1.9
VPS64	YDR200C	CLF1	Q12309	687 aa	Predicted RBP	3.19	□□□□□ -1.9
VPS64	YDR200C	AHC1	Q12433	566 aa		3.19	□□□□□ -1.9
VPS64	YDR200C	CYC1	P00044	109 aa	Predicted RBP	3.19	□□□□□ -1.9
VPS64	YDR200C	CMP2	P14747	604 aa		3.19	□□□□□ -1.9
VPS64	YDR200C	COQ1	P18900	473 aa		3.19	□□□□□ -1.9
VPS64	YDR200C	PRP9	P19736	530 aa	Known RBP	3.19	□□□□□ -1.9
VPS64	YDR200C	ACE2	P21192	770 aa		3.19	□□□□□ -1.9
VPS64	YDR200C	MCM4	P30665	933 aa	Known RBP	3.19	□□□□□ -1.9
VPS64	YDR200C	BCS1	P32839	456 aa		3.19	□□□□□ -1.9
VPS64	YDR200C	TSA1	P34760	196 aa	Known RBP	3.19	□□□□□ -1.9
VPS64	YDR200C	NNF1	P47149	201 aa		3.19	□□□□□ -1.9
VPS64	YDR200C	TPO2	P53283	614 aa		3.19	□□□□□ -1.9
VPS64	YDR200C	MRPS35	P53292	345 aa		3.19	□□□□□ -1.9
VPS64	YDR200C	MRPL22	P53881	309 aa		3.19	□□□□□ -1.9
VPS64	YDR200C	HRQ1	Q05549	1077 aa		3.19	□□□□□ -1.9
VPS64	YDR200C	GUD1	Q07729	489 aa		3.19	□□□□□ -1.9
VPS64	YDR200C	SPO75	Q07798	868 aa		3.19	□□□□□ -1.9
VPS64	YDR200C	ISA1	Q07821	250 aa	Predicted RBP	3.19	□□□□□ -1.9
VPS64	YDR200C	RIF1	P29539	1916 aa		3.18	□□□□□ -1.9
VPS64	YDR200C	TY1B-A	O13527	1196 aa	Known RBP	3.18	□□□□□ -1.9
VPS64	YDR200C	SAM2	P19358	384 aa	Known RBP	3.18	□□□□□ -1.9
VPS64	YDR200C	AAR2	P32357	355 aa	Predicted RBP	3.18	□□□□□ -1.9
VPS64	YDR200C	TFC4	P33339	1025 aa		3.18	□□□□□ -1.9
VPS64	YDR200C	TGL1	P34163	548 aa		3.18	□□□□□ -1.9
VPS64	YDR200C	MYO3	P36006	1272 aa		3.18	□□□□□ -1.9
VPS64	YDR200C	ABZ1	P37254	787 aa	Predicted RBP	3.18	□□□□□ -1.9
VPS64	YDR200C	AIM3	P38266	947 aa	Known RBP	3.18	□□□□□ -1.9
VPS64	YDR200C	SKP2	P42843	763 aa		3.18	□□□□□ -1.9
VPS64	YDR200C	TIM54	P47045	478 aa		3.18	□□□□□ -1.9
VPS64	YDR200C	YJL049W	P47048	450 aa		3.18	□□□□□ -1.9
VPS64	YDR200C	PIB2	P53191	635 aa		3.18	□□□□□ -1.9
VPS64	YDR200C	OSH2	Q12451	1283 aa		3.18	□□□□□ -1.9
VPS64	YDR200C	TOR1	P35169	2470 aa		3.17	□□□□□ -1.9
VPS64	YDR200C	YMR084W	A2P2R3	262 aa		3.17	□□□□□ -1.9
VPS64	YDR200C	SAM1	P10659	382 aa	Known RBP	3.17	□□□□□ -1.9
VPS64	YDR200C	POX1	P13711	748 aa		3.17	□□□□□ -1.9
VPS64	YDR200C	SNA3	P14359	133 aa		3.17	□□□□□ -1.9
VPS64	YDR200C	YUR1	P26725	428 aa		3.17	□□□□□ -1.9
VPS64	YDR200C	THI80	P35202	319 aa		3.17	□□□□□ -1.9
VPS64	YDR200C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
VPS64	YDR200C	MCR1	P36060	302 aa	Known RBP	3.17	□□□□□ -1.9
VPS64	YDR200C	VPS45	P38932	577 aa		3.17	□□□□□ -1.9
VPS64	YDR200C	ALR2	P43553	858 aa		3.17	□□□□□ -1.9
VPS64	YDR200C	HFM1	P51979	1187 aa		3.17	□□□□□ -1.9
VPS64	YDR200C	LSB1	P53281	241 aa		3.17	□□□□□ -1.9
VPS64	YDR200C	FOL1	P53848	824 aa		3.17	□□□□□ -1.9
VPS64	YDR200C	RPS15	Q01855	142 aa	Known RBP	3.17	□□□□□ -1.9
VPS64	YDR200C	VPS30	Q02948	557 aa		3.17	□□□□□ -1.9
VPS64	YDR200C	ECM16	Q04217	1267 aa	Known RBP	3.17	□□□□□ -1.9
VPS64	YDR200C	TMA64	Q04600	565 aa	Known RBP	3.17	□□□□□ -1.9
VPS64	YDR200C	EAF1	Q06337	982 aa		3.17	□□□□□ -1.9
VPS64	YDR200C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
VPS64	YDR200C	OSW2	Q12202	724 aa		3.17	□□□□□ -1.9
VPS64	YDR200C	TRM11	Q12463	433 aa		3.17	□□□□□ -1.9
VPS64	YDR200C	RTP1	Q12751	981 aa		3.17	□□□□□ -1.9
VPS64	YDR200C	CHO2	P05374	869 aa	Known RBP	3.16	□□□□□ -1.9
VPS64	YDR200C	NUC1	P08466	329 aa		3.16	□□□□□ -1.9
VPS64	YDR200C	PRP6	P19735	899 aa	Predicted RBP	3.16	□□□□□ -1.9
VPS64	YDR200C	TKL1	P23254	680 aa	Known RBP	3.16	□□□□□ -1.9
VPS64	YDR200C	RIT1	P23796	513 aa		3.16	□□□□□ -1.9
VPS64	YDR200C	ARE1	P25628	610 aa		3.16	□□□□□ -1.9
VPS64	YDR200C	RPL8B	P29453	256 aa	Known RBP	3.16	□□□□□ -1.9
VPS64	YDR200C	PRO3	P32263	286 aa	Known RBP	3.16	□□□□□ -1.9
VPS64	YDR200C	CDC12	P32468	407 aa	Known RBP	3.16	□□□□□ -1.9
VPS64	YDR200C	ANP1	P32629	500 aa		3.16	□□□□□ -1.9
VPS64	YDR200C	PRS1	P32895	427 aa	Known RBP	3.16	□□□□□ -1.9
VPS64	YDR200C	YKL151C	P36059	337 aa		3.16	□□□□□ -1.9
VPS64	YDR200C	DBP7	P36120	742 aa	Known RBP	3.16	□□□□□ -1.9
VPS64	YDR200C	RFC1	P38630	861 aa	Known RBP	3.16	□□□□□ -1.9
VPS64	YDR200C	ERP6	P53198	216 aa		3.16	□□□□□ -1.9
VPS64	YDR200C	DAK1	P54838	584 aa	Known RBP	3.16	□□□□□ -1.9
VPS64	YDR200C	RPT6	Q01939	405 aa	Known RBP	3.16	□□□□□ -1.9
VPS64	YDR200C	SLD5	Q03406	294 aa		3.16	□□□□□ -1.9
VPS64	YDR200C	ROT1	Q03691	256 aa		3.16	□□□□□ -1.9
VPS64	YDR200C	FMP25	Q08023	583 aa		3.16	□□□□□ -1.9
VPS64	YDR200C	MDM38	Q08179	573 aa		3.16	□□□□□ -1.9
VPS64	YDR200C	RIB2	Q12362	591 aa	Known RBP	3.16	□□□□□ -1.9
VPS64	YDR200C	ERP3	Q12403	225 aa		3.16	□□□□□ -1.9
VPS64	YDR200C	GAL10	P04397	699 aa		3.16	□□□□□ -1.9
VPS64	YDR200C	TPM1	P17536	199 aa	Known RBP	3.16	□□□□□ -1.9
VPS64	YDR200C	SHP1	P34223	423 aa		3.16	□□□□□ -1.9
VPS64	YDR200C	POA1	P38218	177 aa		3.16	□□□□□ -1.9
VPS64	YDR200C	CRG1	P38892	291 aa	RIP-Chip data	3.16	□□□□□ -1.9	not detected
VPS64	YDR200C	TAT2	P38967	592 aa		3.16	□□□□□ -1.9
VPS64	YDR200C	CCC2	P38995	1004 aa		3.16	□□□□□ -1.9
VPS64	YDR200C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
VPS64	YDR200C	PFD1	P46988	109 aa		3.16	□□□□□ -1.9
VPS64	YDR200C	YMR321C	Q04898	105 aa		3.16	□□□□□ -1.9
VPS64	YDR200C	CDC53	Q12018	815 aa	Known RBP	3.16	□□□□□ -1.9
VPS64	YDR200C	YLL058W	Q12198	575 aa		3.16	□□□□□ -1.9
VPS64	YDR200C	FKS1	P38631	1876 aa	Known RBP	3.15	□□□□□ -1.9
VPS64	YDR200C	ADE8	P04161	214 aa		3.15	□□□□□ -1.91
VPS64	YDR200C	ENA1	P13587	1091 aa		3.15	□□□□□ -1.91
VPS64	YDR200C	HSP60	P19882	572 aa	Known RBP	3.15	□□□□□ -1.91
VPS64	YDR200C	MAK31	P23059	88 aa		3.15	□□□□□ -1.91
VPS64	YDR200C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
VPS64	YDR200C	CDC11	P32458	415 aa		3.15	□□□□□ -1.91
VPS64	YDR200C	YRO2	P38079	344 aa		3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms