RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C RTT107P38850 1070 aa6.66□□□□□ -1.34
CDC34YDR054C YAP1801P38856 637 aa6.66□□□□□ -1.34
CDC34YDR054C UBP5P39944 805 aa6.66□□□□□ -1.34
CDC34YDR054C RPN3P40016 523 aaKnown RBP6.66□□□□□ -1.34
CDC34YDR054C ALR2P43553 858 aa6.66□□□□□ -1.34
CDC34YDR054C RSM26P47141 266 aa6.66□□□□□ -1.34
CDC34YDR054C SPC105P53148 917 aa6.66□□□□□ -1.34
CDC34YDR054C TOF1P53840 1238 aa6.66□□□□□ -1.34
CDC34YDR054C INH1P01097 85 aa6.65□□□□□ -1.34
CDC34YDR054C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.65□□□□□ -1.34not detected
CDC34YDR054C OM45P16547 393 aa6.65□□□□□ -1.34
CDC34YDR054C NPR1P22211 790 aa6.65□□□□□ -1.34
CDC34YDR054C MSH3P25336 1018 aa6.65□□□□□ -1.34
CDC34YDR054C NFU1P32860 256 aa6.65□□□□□ -1.34
CDC34YDR054C BET3P36149 193 aa6.65□□□□□ -1.34
CDC34YDR054C MIP6P38760 659 aaKnown RBP6.65□□□□□ -1.34
CDC34YDR054C GDH3P39708 457 aa6.65□□□□□ -1.34
CDC34YDR054C RPS7BP48164 190 aaKnown RBP6.65□□□□□ -1.34
CDC34YDR054C ZPR1P53303 486 aaKnown RBP6.65□□□□□ -1.34
CDC34YDR054C YLR225CQ05948 407 aaKnown RBP6.65□□□□□ -1.34
CDC34YDR054C BUD20Q08004 166 aaPredicted RBP6.65□□□□□ -1.34
CDC34YDR054C TCO89Q08921 799 aa6.65□□□□□ -1.34
CDC34YDR054C APL4Q12028 832 aa6.65□□□□□ -1.34
CDC34YDR054C TY3A-GQ12173 290 aa6.65□□□□□ -1.34
CDC34YDR054C TY3A-IQ99219 290 aa6.65□□□□□ -1.34
CDC34YDR054C PHO13P19881 312 aa6.64□□□□□ -1.35
CDC34YDR054C MSN1P22148 382 aa6.64□□□□□ -1.35
CDC34YDR054C LYP1P32487 611 aa6.64□□□□□ -1.35
CDC34YDR054C TFC4P33339 1025 aa6.64□□□□□ -1.35
CDC34YDR054C PXL1P36166 706 aa6.64□□□□□ -1.35
CDC34YDR054C SEA4P38164 1038 aa6.64□□□□□ -1.35
CDC34YDR054C CTM1P38818 585 aa6.64□□□□□ -1.35
CDC34YDR054C DSS1P39112 969 aa6.64□□□□□ -1.35
CDC34YDR054C TFG2P41896 400 aaPredicted RBP6.64□□□□□ -1.35
CDC34YDR054C AVT1P47082 602 aa6.64□□□□□ -1.35
CDC34YDR054C GPG1P53130 126 aa6.64□□□□□ -1.35
CDC34YDR054C VPS75P53853 264 aa6.64□□□□□ -1.35
CDC34YDR054C NCS2P53923 493 aaPredicted RBP6.64□□□□□ -1.35
CDC34YDR054C TGL2P54857 326 aa6.64□□□□□ -1.35
CDC34YDR054C SEC5P89102 971 aa6.64□□□□□ -1.35
CDC34YDR054C HFD1Q04458 532 aa6.64□□□□□ -1.35
CDC34YDR054C YPQ2Q06328 317 aa6.64□□□□□ -1.35
CDC34YDR054C YPL277CQ08989 487 aa6.64□□□□□ -1.35
CDC34YDR054C WTM2Q12206 467 aa6.64□□□□□ -1.35
CDC34YDR054C TOM1Q03280 3268 aa6.63□□□□□ -1.35
CDC34YDR054C MPH2P0CD99 609 aa6.63□□□□□ -1.35
CDC34YDR054C TCP1P12612 559 aaKnown RBP6.63□□□□□ -1.35
CDC34YDR054C MKS1P34072 584 aa6.63□□□□□ -1.35
CDC34YDR054C TVP38P36164 337 aa6.63□□□□□ -1.35
CDC34YDR054C FLR1P38124 548 aa6.63□□□□□ -1.35
CDC34YDR054C HMF1P40037 129 aaKnown RBP6.63□□□□□ -1.35
CDC34YDR054C VPS53P47061 822 aa6.63□□□□□ -1.35
CDC34YDR054C HFM1P51979 1187 aa6.63□□□□□ -1.35
CDC34YDR054C YNL034WP53963 612 aa6.63□□□□□ -1.35
CDC34YDR054C YNL018CP53976 612 aa6.63□□□□□ -1.35
CDC34YDR054C CWC2Q12046 339 aaPredicted RBP6.63□□□□□ -1.35
CDC34YDR054C TRM11Q12463 433 aa6.63□□□□□ -1.35
CDC34YDR054C PRT1P06103 763 aaKnown RBP6.62□□□□□ -1.35
CDC34YDR054C DED1P06634 604 aaKnown RBP6.62□□□□□ -1.35
CDC34YDR054C PCK1P10963 549 aa6.62□□□□□ -1.35
CDC34YDR054C PRE10P21242 288 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
CDC34YDR054C GFD2P25370 566 aaKnown RBP6.62□□□□□ -1.35
CDC34YDR054C SPT16P32558 1035 aaKnown RBP6.62□□□□□ -1.35
CDC34YDR054C RGT1P32862 1170 aa6.62□□□□□ -1.35
CDC34YDR054C SAP190P36123 1033 aa6.62□□□□□ -1.35
CDC34YDR054C BAP2P38084 609 aa6.62□□□□□ -1.35
CDC34YDR054C RIM4P38741 713 aa6.62□□□□□ -1.35
CDC34YDR054C YEL025CP39991 1188 aa6.62□□□□□ -1.35
CDC34YDR054C QDR2P40474 542 aa6.62□□□□□ -1.35
CDC34YDR054C GNP1P48813 663 aa6.62□□□□□ -1.35
CDC34YDR054C NUT1P53114 1132 aa6.62□□□□□ -1.35
CDC34YDR054C TAM41P53230 385 aa6.62□□□□□ -1.35
CDC34YDR054C MET14Q02196 202 aa6.62□□□□□ -1.35
CDC34YDR054C ROD1Q02805 837 aa6.62□□□□□ -1.35
CDC34YDR054C MAS2P11914 482 aa6.61□□□□□ -1.35
CDC34YDR054C POX1P13711 748 aa6.61□□□□□ -1.35
CDC34YDR054C HSC82P15108 705 aaKnown RBP6.61□□□□□ -1.35
CDC34YDR054C DBP5P20449 482 aaKnown RBP6.61□□□□□ -1.35
CDC34YDR054C SPO11P23179 398 aa6.61□□□□□ -1.35
CDC34YDR054C KIN82P25341 720 aa6.61□□□□□ -1.35
CDC34YDR054C RRP43P25359 394 aaPredicted RBP6.61□□□□□ -1.35
CDC34YDR054C MRF1P30775 413 aaPredicted RBP6.61□□□□□ -1.35
CDC34YDR054C IRE1P32361 1115 aa6.61□□□□□ -1.35
CDC34YDR054C PLC1P32383 869 aa6.61□□□□□ -1.35
CDC34YDR054C YSC83P32792 385 aa6.61□□□□□ -1.35
CDC34YDR054C TFC3P34111 1160 aa6.61□□□□□ -1.35
CDC34YDR054C PCH2P38126 564 aa6.61□□□□□ -1.35
CDC34YDR054C HOS4P40480 1083 aa6.61□□□□□ -1.35
CDC34YDR054C LCB2P40970 561 aa6.61□□□□□ -1.35
CDC34YDR054C FYV8P46949 817 aaKnown RBP6.61□□□□□ -1.35
CDC34YDR054C CCM1P48237 864 aaPredicted RBP6.61□□□□□ -1.35
CDC34YDR054C MAL11P53048 616 aa6.61□□□□□ -1.35
CDC34YDR054C DUS1P53759 423 aaKnown RBP6.61□□□□□ -1.35
CDC34YDR054C CTR9P89105 1077 aa6.61□□□□□ -1.35
CDC34YDR054C NPL3Q01560 414 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
CDC34YDR054C MET7Q08645 548 aa6.61□□□□□ -1.35
CDC34YDR054C YLL058WQ12198 575 aa6.61□□□□□ -1.35
CDC34YDR054C MED1Q12321 566 aa6.61□□□□□ -1.35
CDC34YDR054C Q0182Q9ZZW1 134 aa6.61□□□□□ -1.35
CDC34YDR054C TOM70P07213 617 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms