RNA–Protein interactions for RNA: YCR077C

PAT1, Transcript of Deadenylation-dependent mRNA-decapping factor, yeastyeast

Gene PAT1, Length 2,391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAT1YCR077C TDA11P38854 504 aa6.28□□□□□ -1.4
PAT1YCR077C RGA1P39083 1007 aa6.28□□□□□ -1.4
PAT1YCR077C YHB1P39676 399 aaKnown RBP6.28□□□□□ -1.4
PAT1YCR077C SIP5P40210 489 aaKnown RBP6.28□□□□□ -1.4
PAT1YCR077C PHB1P40961 287 aa6.28□□□□□ -1.4
PAT1YCR077C RIM8P53179 542 aa6.28□□□□□ -1.4
PAT1YCR077C RET3P53600 189 aa6.28□□□□□ -1.4
PAT1YCR077C YNR021WP53723 404 aaKnown RBP6.28□□□□□ -1.4
PAT1YCR077C TDA9Q04545 1251 aa6.28□□□□□ -1.4
PAT1YCR077C CST9Q06032 482 aa6.28□□□□□ -1.4
PAT1YCR077C YLH47Q06493 454 aa6.28□□□□□ -1.4
PAT1YCR077C VIP1Q06685 1146 aaKnown RBP6.28□□□□□ -1.4
PAT1YCR077C YPR078CQ06813 372 aa6.28□□□□□ -1.4
PAT1YCR077C YPL277CQ08989 487 aa6.28□□□□□ -1.4
PAT1YCR077C TUF1P02992 437 aaKnown RBP6.27□□□□□ -1.41
PAT1YCR077C ILS1P09436 1072 aaKnown RBP6.27□□□□□ -1.41
PAT1YCR077C PEP5P12868 1029 aa6.27□□□□□ -1.41
PAT1YCR077C CAF20P12962 161 aaKnown RBP6.27□□□□□ -1.41
PAT1YCR077C ISY1P21374 235 aaPredicted RBP6.27□□□□□ -1.41
PAT1YCR077C REC107P21651 314 aa6.27□□□□□ -1.41
PAT1YCR077C SMC1P32908 1225 aa6.27□□□□□ -1.41
PAT1YCR077C XRS2P33301 854 aa6.27□□□□□ -1.41
PAT1YCR077C PXA2P34230 853 aa6.27□□□□□ -1.41
PAT1YCR077C MMS21P38632 267 aa6.27□□□□□ -1.41
PAT1YCR077C INA22P40576 216 aa6.27□□□□□ -1.41
PAT1YCR077C GPD2P41911 440 aaKnown RBP6.27□□□□□ -1.41
PAT1YCR077C YFL066CP43538 392 aa6.27□□□□□ -1.41
PAT1YCR077C YKR005CQ02203 525 aa6.27□□□□□ -1.41
PAT1YCR077C YMR187CQ03236 431 aa6.27□□□□□ -1.41
PAT1YCR077C TAF12Q03761 539 aa6.27□□□□□ -1.41
PAT1YCR077C PHM6Q05637 104 aa6.27□□□□□ -1.41
PAT1YCR077C AIM41Q12032 185 aa6.27□□□□□ -1.41
PAT1YCR077C PMD1P32634 1753 aa6.27□□□□□ -1.41
PAT1YCR077C APN1P22936 367 aa6.26□□□□□ -1.41
PAT1YCR077C YBR032WP38223 100 aa6.26□□□□□ -1.41
PAT1YCR077C VPS70P47161 811 aa6.26□□□□□ -1.41
PAT1YCR077C MPS2P53159 387 aa6.26□□□□□ -1.41
PAT1YCR077C CPR6P53691 371 aaKnown RBP6.26□□□□□ -1.41
PAT1YCR077C ATP25Q03153 612 aa6.26□□□□□ -1.41
PAT1YCR077C UTP14Q04500 899 aaKnown RBP6.26□□□□□ -1.41
PAT1YCR077C TDA5Q06417 326 aaKnown RBP6.26□□□□□ -1.41
PAT1YCR077C ACF2Q12168 779 aa6.26□□□□□ -1.41
PAT1YCR077C HAT1Q12341 374 aa6.26□□□□□ -1.41
PAT1YCR077C YBL113CQ7M4S9 792 aa6.26□□□□□ -1.41
PAT1YCR077C YML002WP0CF17 737 aa6.26□□□□□ -1.41
PAT1YCR077C CLN3P13365 580 aa6.26□□□□□ -1.41
PAT1YCR077C POL3P15436 1097 aa6.26□□□□□ -1.41
PAT1YCR077C RPB4P20433 221 aaPredicted RBP6.26□□□□□ -1.41
PAT1YCR077C PWP1P21304 576 aaKnown RBP6.26□□□□□ -1.41
PAT1YCR077C RIT1P23796 513 aa6.26□□□□□ -1.41
PAT1YCR077C MSH2P25847 964 aa6.26□□□□□ -1.41
PAT1YCR077C MLS1P30952 554 aa6.26□□□□□ -1.41
PAT1YCR077C SIN4P32259 974 aa6.26□□□□□ -1.41
PAT1YCR077C IRR1P40541 1150 aa6.26□□□□□ -1.41
PAT1YCR077C APS3P47064 194 aa6.26□□□□□ -1.41
PAT1YCR077C ISM1P48526 1002 aa6.26□□□□□ -1.41
PAT1YCR077C FDC1Q03034 503 aa6.26□□□□□ -1.41
PAT1YCR077C ADY4Q05955 493 aa6.26□□□□□ -1.41
PAT1YCR077C MEU1Q07938 337 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41not detected
PAT1YCR077C FIG2P25653 1609 aa6.26□□□□□ -1.41
PAT1YCR077C TEF1P02994 458 aaKnown RBP6.25□□□□□ -1.41
PAT1YCR077C SNA3P14359 133 aa6.25□□□□□ -1.41
PAT1YCR077C THR1P17423 357 aaKnown RBP6.25□□□□□ -1.41
PAT1YCR077C CKA2P19454 339 aa6.25□□□□□ -1.41
PAT1YCR077C PKC1P24583 1151 aa6.25□□□□□ -1.41
PAT1YCR077C BCH2P36122 765 aa6.25□□□□□ -1.41
PAT1YCR077C YBL086CP38177 466 aa6.25□□□□□ -1.41
PAT1YCR077C SCS2P40075 244 aaKnown RBP6.25□□□□□ -1.41
PAT1YCR077C TOS3P43637 560 aa6.25□□□□□ -1.41
PAT1YCR077C FIN1Q03898 291 aa6.25□□□□□ -1.41
PAT1YCR077C SOG2Q08817 791 aa6.25□□□□□ -1.41
PAT1YCR077C CIT1P00890 479 aa6.25□□□□□ -1.41
PAT1YCR077C MER1P16523 270 aa6.25□□□□□ -1.41
PAT1YCR077C SEC2P17065 759 aa6.25□□□□□ -1.41
PAT1YCR077C MGM1P32266 881 aa6.25□□□□□ -1.41
PAT1YCR077C YBL055CP34220 418 aaPredicted RBP6.25□□□□□ -1.41
PAT1YCR077C VMA22P38784 181 aa6.25□□□□□ -1.41
PAT1YCR077C LCP5P40079 357 aaPredicted RBP6.25□□□□□ -1.41
PAT1YCR077C ATG32P40458 529 aa6.25□□□□□ -1.41
PAT1YCR077C SNZ3P43545 298 aa6.25□□□□□ -1.41
PAT1YCR077C SNZ2P53824 298 aa6.25□□□□□ -1.41
PAT1YCR077C COG6P53959 839 aa6.25□□□□□ -1.41
PAT1YCR077C RPL22BP56628 122 aaKnown RBP6.25□□□□□ -1.41
PAT1YCR077C CEG1Q01159 459 aaPredicted RBP6.25□□□□□ -1.41
PAT1YCR077C RPN4Q03465 531 aa6.25□□□□□ -1.41
PAT1YCR077C VPS36Q06696 566 aa6.25□□□□□ -1.41
PAT1YCR077C BUG1Q12191 341 aa6.25□□□□□ -1.41
PAT1YCR077C TRP2P00899 507 aaKnown RBP6.24□□□□□ -1.41
PAT1YCR077C PDE2P06776 526 aa6.24□□□□□ -1.41
PAT1YCR077C ADE3P07245 946 aaKnown RBP6.24□□□□□ -1.41
PAT1YCR077C ADE2P21264 571 aaKnown RBP6.24□□□□□ -1.41
PAT1YCR077C ITR2P30606 609 aa6.24□□□□□ -1.41
PAT1YCR077C PRO3P32263 286 aaKnown RBP6.24□□□□□ -1.41
PAT1YCR077C EUG1P32474 517 aa6.24□□□□□ -1.41
PAT1YCR077C DUR3P33413 735 aa6.24□□□□□ -1.41
PAT1YCR077C PTC3P34221 468 aaKnown RBP6.24□□□□□ -1.41
PAT1YCR077C ECM2P38241 364 aaKnown RBP6.24□□□□□ -1.41
PAT1YCR077C HXT8P40886 569 aa6.24□□□□□ -1.41
PAT1YCR077C EMW1P42842 904 aaKnown RBP6.24□□□□□ -1.41
PAT1YCR077C ALB1P47019 175 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms