RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 DUG2P38149 878 aa9.12□□□□□ -0.95
LSR1LSR1 POP4P38336 279 aa9.12□□□□□ -0.95
LSR1LSR1 RPS0BP46654 252 aaKnown RBP9.12□□□□□ -0.95
LSR1LSR1 ZAP1P47043 880 aa9.12□□□□□ -0.95
LSR1LSR1 VPS53P47061 822 aa9.12□□□□□ -0.95
LSR1LSR1 NOG2P53742 486 aaKnown RBP9.12□□□□□ -0.95
LSR1LSR1 YNL146WP53906 100 aa9.12□□□□□ -0.95
LSR1LSR1 RRD2Q12461 358 aa9.12□□□□□ -0.95
LSR1LSR1 ECM3Q99252 613 aa9.12□□□□□ -0.95
LSR1LSR1 YLR278CQ05854 1341 aa9.11□□□□□ -0.95
LSR1LSR1 TUB3P09734 445 aaKnown RBP9.11□□□□□ -0.95
LSR1LSR1 SIS1P25294 352 aaKnown RBP9.11□□□□□ -0.95
LSR1LSR1 KIP2P28743 706 aa9.11□□□□□ -0.95
LSR1LSR1 CBF2P32504 956 aa9.11□□□□□ -0.95
LSR1LSR1 PCA1P38360 1216 aa9.11□□□□□ -0.95
LSR1LSR1 AIM21P40563 679 aa9.11□□□□□ -0.95
LSR1LSR1 ALA1P40825 983 aaKnown RBP9.11□□□□□ -0.95
LSR1LSR1 EMW1P42842 904 aaKnown RBP9.11□□□□□ -0.95
LSR1LSR1 YJL045WP47052 634 aa9.11□□□□□ -0.95
LSR1LSR1 YJR142WP47173 342 aa9.11□□□□□ -0.95
LSR1LSR1 UBP15P50101 1230 aa9.11□□□□□ -0.95
LSR1LSR1 HUL5P53119 910 aa9.11□□□□□ -0.95
LSR1LSR1 DRN1P53255 507 aaKnown RBP9.11□□□□□ -0.95
LSR1LSR1 GTR1Q00582 310 aa9.11□□□□□ -0.95
LSR1LSR1 YMR027WQ04371 470 aa9.11□□□□□ -0.95
LSR1LSR1 SMC5Q08204 1093 aa9.11□□□□□ -0.95
LSR1LSR1 ERP3Q12403 225 aa9.11□□□□□ -0.95
LSR1LSR1 YMR085WP0CF18 432 aa9.1□□□□□ -0.95
LSR1LSR1 COX11P19516 300 aaKnown RBP9.1□□□□□ -0.95
LSR1LSR1 MRPS28P21771 286 aa9.1□□□□□ -0.95
LSR1LSR1 VAN1P23642 535 aa9.1□□□□□ -0.95
LSR1LSR1 SEC14P24280 304 aaKnown RBP9.1□□□□□ -0.95
LSR1LSR1 OCT1P35999 772 aa9.1□□□□□ -0.95
LSR1LSR1 TVP38P36164 337 aa9.1□□□□□ -0.95
LSR1LSR1 SPC97P38863 823 aa9.1□□□□□ -0.95
LSR1LSR1 HMF1P40037 129 aaKnown RBP9.1□□□□□ -0.95
LSR1LSR1 TMN3P40071 706 aa9.1□□□□□ -0.95
LSR1LSR1 FTR1P40088 404 aa9.1□□□□□ -0.95
LSR1LSR1 CEF1Q03654 590 aaPredicted RBP9.1□□□□□ -0.95
LSR1LSR1 IVY1Q04934 453 aa9.1□□□□□ -0.95
LSR1LSR1 LCB5Q06147 687 aaKnown RBP9.1□□□□□ -0.95
LSR1LSR1 ALR1Q08269 859 aa9.1□□□□□ -0.95
LSR1LSR1 YDR018CQ12185 396 aa9.1□□□□□ -0.95
LSR1LSR1 CMD1P06787 147 aaKnown RBP9.09□□□□□ -0.95
LSR1LSR1 TKL1P23254 680 aaKnown RBP9.09□□□□□ -0.95
LSR1LSR1 MRM1P25270 412 aa9.09□□□□□ -0.95
LSR1LSR1 KIN82P25341 720 aa9.09□□□□□ -0.95
LSR1LSR1 GYP6P32806 458 aa9.09□□□□□ -0.95
LSR1LSR1 SEG2P34250 1132 aa9.09□□□□□ -0.95
LSR1LSR1 REG2P38232 338 aa9.09□□□□□ -0.95
LSR1LSR1 HSM3P38348 480 aa9.09□□□□□ -0.95
LSR1LSR1 AXL1P40851 1208 aa9.09□□□□□ -0.95
LSR1LSR1 YML6P51998 286 aa9.09□□□□□ -0.95
LSR1LSR1 FPK1P53739 893 aa9.09□□□□□ -0.95
LSR1LSR1 STE20Q03497 939 aaKnown RBP9.09□□□□□ -0.95
LSR1LSR1 GNT1Q12096 491 aa9.09□□□□□ -0.95
LSR1LSR1 NAT1P12945 854 aaKnown RBP9.08□□□□□ -0.96
LSR1LSR1 MRPL25P23369 157 aa9.08□□□□□ -0.96
LSR1LSR1 RRT12P25381 491 aa9.08□□□□□ -0.96
LSR1LSR1 MGT1P26188 188 aa9.08□□□□□ -0.96
LSR1LSR1 MLS1P30952 554 aa9.08□□□□□ -0.96
LSR1LSR1 STE13P33894 931 aa9.08□□□□□ -0.96
LSR1LSR1 APM2P38700 605 aa9.08□□□□□ -0.96
LSR1LSR1 REV7P38927 245 aa9.08□□□□□ -0.96
LSR1LSR1 YEL025CP39991 1188 aa9.08□□□□□ -0.96
LSR1LSR1 ARG2P40360 574 aa9.08□□□□□ -0.96
LSR1LSR1 MKT1P40850 830 aaKnown RBP9.08□□□□□ -0.96
LSR1LSR1 TFG1P41895 735 aaPredicted RBP9.08□□□□□ -0.96
LSR1LSR1 SBE2P42223 864 aaKnown RBP9.08□□□□□ -0.96
LSR1LSR1 INP52P50942 1183 aa9.08□□□□□ -0.96
LSR1LSR1 CUL3P53202 744 aa9.08□□□□□ -0.96
LSR1LSR1 COG6P53959 839 aa9.08□□□□□ -0.96
LSR1LSR1 PEX29Q03370 554 aa9.08□□□□□ -0.96
LSR1LSR1 SVF1Q05515 481 aa9.08□□□□□ -0.96
LSR1LSR1 MDM38Q08179 573 aa9.08□□□□□ -0.96
LSR1LSR1 PDR1P12383 1068 aa9.07□□□□□ -0.96
LSR1LSR1 KAR4P25583 335 aa9.07□□□□□ -0.96
LSR1LSR1 EFB1P32471 206 aaKnown RBP9.07□□□□□ -0.96
LSR1LSR1 DBP7P36120 742 aaKnown RBP9.07□□□□□ -0.96
LSR1LSR1 YBP1P38315 674 aa9.07□□□□□ -0.96
LSR1LSR1 OAF1P39720 1047 aaPredicted RBP9.07□□□□□ -0.96
LSR1LSR1 PFK26P40433 827 aaKnown RBP9.07□□□□□ -0.96
LSR1LSR1 TMA108P40462 946 aa9.07□□□□□ -0.96
LSR1LSR1 SHE10P53075 577 aa9.07□□□□□ -0.96
LSR1LSR1 YDR090CQ03193 310 aa9.07□□□□□ -0.96
LSR1LSR1 PRM6Q04705 352 aa9.07□□□□□ -0.96
LSR1LSR1 KAP95Q06142 861 aaKnown RBP9.07□□□□□ -0.96
LSR1LSR1 CDC73Q06697 393 aa9.07□□□□□ -0.96
LSR1LSR1 ABP140Q08641 628 aaKnown RBP9.07□□□□□ -0.96
LSR1LSR1 TRE1Q08919 783 aa9.07□□□□□ -0.96
LSR1LSR1 FAP7Q12055 197 aaPredicted RBP9.07□□□□□ -0.96
LSR1LSR1 AIM7Q12156 149 aa9.07□□□□□ -0.96
LSR1LSR1 YER152CP10356 443 aa9.06□□□□□ -0.96
LSR1LSR1 SLI15P38283 698 aa9.06□□□□□ -0.96
LSR1LSR1 CBR1P38626 284 aaKnown RBP9.06□□□□□ -0.96
LSR1LSR1 MSR1P38714 643 aa9.06□□□□□ -0.96
LSR1LSR1 VPS29P38759 282 aa9.06□□□□□ -0.96
LSR1LSR1 ERP5P38819 212 aa9.06□□□□□ -0.96
LSR1LSR1 EAF5P39995 279 aa9.06□□□□□ -0.96
LSR1LSR1 SAE2P46946 345 aa9.06□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms