RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	TY4A-J	P47023	414 aa		3.36	□□□□□ -1.87
YPR039W	YPR039W	HXT16	P47185	567 aa		3.36	□□□□□ -1.87
YPR039W	YPR039W	ZDS1	P50111	915 aa	Known RBP	3.36	□□□□□ -1.87
YPR039W	YPR039W	UBC11	P52492	156 aa		3.36	□□□□□ -1.87
YPR039W	YPR039W	TEX1	P53851	422 aa	Known RBP	3.36	□□□□□ -1.87
YPR039W	YPR039W	SGO1	Q08490	590 aa		3.36	□□□□□ -1.87
YPR039W	YPR039W	YLR125W	Q12138	136 aa		3.36	□□□□□ -1.87
YPR039W	YPR039W	YTA7	P40340	1379 aa		3.36	□□□□□ -1.87
YPR039W	YPR039W	DIF1	O13577	133 aa		3.35	□□□□□ -1.87
YPR039W	YPR039W	CIT2	P08679	460 aa		3.35	□□□□□ -1.87
YPR039W	YPR039W	TUB1	P09733	447 aa	Known RBP	3.35	□□□□□ -1.87
YPR039W	YPR039W	PHO8	P11491	566 aa		3.35	□□□□□ -1.87
YPR039W	YPR039W	HIR1	P32479	840 aa		3.35	□□□□□ -1.87
YPR039W	YPR039W	OSW7	P43611	510 aa		3.35	□□□□□ -1.87
YPR039W	YPR039W	MAL11	P53048	616 aa		3.35	□□□□□ -1.87
YPR039W	YPR039W	ZIP2	P53061	704 aa		3.35	□□□□□ -1.87
YPR039W	YPR039W	SSL2	Q00578	843 aa		3.35	□□□□□ -1.87
YPR039W	YPR039W	RGC1	Q06108	1083 aa	Known RBP	3.35	□□□□□ -1.87
YPR039W	YPR039W	HCA4	P20448	770 aa	Known RBP	3.34	□□□□□ -1.87
YPR039W	YPR039W	SIC1	P38634	284 aa		3.34	□□□□□ -1.87
YPR039W	YPR039W	CCT7	P42943	550 aa	Known RBP	3.34	□□□□□ -1.87
YPR039W	YPR039W	ALY2	P47029	1046 aa		3.34	□□□□□ -1.87
YPR039W	YPR039W	TEL2	P53038	688 aa		3.34	□□□□□ -1.87
YPR039W	YPR039W	FPR4	Q06205	392 aa	Predicted RBP	3.34	□□□□□ -1.87
YPR039W	YPR039W	MDM12	Q92328	271 aa		3.34	□□□□□ -1.87
YPR039W	YPR039W	THI4	P32318	326 aa		3.33	□□□□□ -1.88
YPR039W	YPR039W	EMP70	P32802	667 aa		3.33	□□□□□ -1.88
YPR039W	YPR039W	MTC2	P34246	357 aa		3.33	□□□□□ -1.88
YPR039W	YPR039W	UBS1	P38290	277 aa		3.33	□□□□□ -1.88
YPR039W	YPR039W	YBR259W	P38338	688 aa		3.33	□□□□□ -1.88
YPR039W	YPR039W	SNM1	P40993	198 aa		3.33	□□□□□ -1.88
YPR039W	YPR039W	MTL1	P53214	551 aa		3.33	□□□□□ -1.88
YPR039W	YPR039W	SMX3	P54999	86 aa	Predicted RBP	3.33	□□□□□ -1.88
YPR039W	YPR039W	YDR338C	Q05497	695 aa		3.33	□□□□□ -1.88
YPR039W	YPR039W	CDC9	P04819	755 aa		3.32	□□□□□ -1.88
YPR039W	YPR039W	GSY1	P23337	708 aa		3.32	□□□□□ -1.88
YPR039W	YPR039W	ADY2	P25613	283 aa		3.32	□□□□□ -1.88
YPR039W	YPR039W	MSH2	P25847	964 aa		3.32	□□□□□ -1.88
YPR039W	YPR039W	STO1	P34160	861 aa	Known RBP	3.32	□□□□□ -1.88
YPR039W	YPR039W	SFB3	P38810	929 aa		3.32	□□□□□ -1.88
YPR039W	YPR039W	DSS1	P39112	969 aa		3.32	□□□□□ -1.88
YPR039W	YPR039W	YJL206C	P39529	758 aa		3.32	□□□□□ -1.88
YPR039W	YPR039W	BAP3	P41815	604 aa		3.32	□□□□□ -1.88
YPR039W	YPR039W	PAN2	P53010	1115 aa	Predicted RBP	3.32	□□□□□ -1.88
YPR039W	YPR039W	IMO32	P53219	342 aa		3.32	□□□□□ -1.88
YPR039W	YPR039W	GAD1	Q04792	585 aa		3.32	□□□□□ -1.88
YPR039W	YPR039W	THI7	Q05998	598 aa		3.32	□□□□□ -1.88
YPR039W	YPR039W	ARO10	Q06408	635 aa		3.32	□□□□□ -1.88
YPR039W	YPR039W	MEF1	P25039	761 aa		3.31	□□□□□ -1.88
YPR039W	YPR039W	ERG6	P25087	383 aa	Known RBP	3.31	□□□□□ -1.88
YPR039W	YPR039W	VBA3	P25594	458 aa		3.31	□□□□□ -1.88
YPR039W	YPR039W	MCD4	P36051	919 aa		3.31	□□□□□ -1.88
YPR039W	YPR039W	YHR112C	P38716	378 aa		3.31	□□□□□ -1.88
YPR039W	YPR039W	RPN10	P38886	268 aa	Known RBP	3.31	□□□□□ -1.88
YPR039W	YPR039W	YIL166C	P40445	542 aa		3.31	□□□□□ -1.88
YPR039W	YPR039W	CAF16	P43569	289 aa		3.31	□□□□□ -1.88
YPR039W	YPR039W	PRP31	P49704	494 aa	Predicted RBP	3.31	□□□□□ -1.88
YPR039W	YPR039W	UGO1	Q03327	502 aa		3.31	□□□□□ -1.88
YPR039W	YPR039W	Q0142	Q9ZZW4	58 aa		3.31	□□□□□ -1.88
YPR039W	YPR039W	ADE2	P21264	571 aa	Known RBP	3.3	□□□□□ -1.88
YPR039W	YPR039W	MVD1	P32377	396 aa	Known RBP	3.3	□□□□□ -1.88
YPR039W	YPR039W	PEX6	P33760	1030 aa		3.3	□□□□□ -1.88
YPR039W	YPR039W	FMO1	P38866	432 aa		3.3	□□□□□ -1.88
YPR039W	YPR039W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.3	□□□□□ -1.88	not detected
YPR039W	YPR039W	REV7	P38927	245 aa		3.3	□□□□□ -1.88
YPR039W	YPR039W	LYS9	P38999	446 aa		3.3	□□□□□ -1.88
YPR039W	YPR039W	NDC80	P40460	691 aa		3.3	□□□□□ -1.88
YPR039W	YPR039W	SNP1	Q00916	300 aa	Predicted RBP	3.3	□□□□□ -1.88
YPR039W	YPR039W	POB3	Q04636	552 aa	Known RBP	3.3	□□□□□ -1.88
YPR039W	YPR039W	ATG11	Q12527	1178 aa		3.3	□□□□□ -1.88
YPR039W	YPR039W	DMC1	P25453	334 aa		3.29	□□□□□ -1.88
YPR039W	YPR039W	YFL052W	P43551	465 aa		3.29	□□□□□ -1.88
YPR039W	YPR039W	NPY1	P53164	384 aa		3.29	□□□□□ -1.88
YPR039W	YPR039W	YBP2	P53169	641 aa		3.29	□□□□□ -1.88
YPR039W	YPR039W	MLH3	Q12083	715 aa		3.29	□□□□□ -1.88
YPR039W	YPR039W	TAF3	Q12297	353 aa		3.29	□□□□□ -1.88
YPR039W	YPR039W	YKL033W-A	Q86ZR7	236 aa		3.29	□□□□□ -1.88
YPR039W	YPR039W	SIR3	P06701	978 aa		3.28	□□□□□ -1.88
YPR039W	YPR039W	SRD1	P09007	221 aa		3.28	□□□□□ -1.88
YPR039W	YPR039W	CCT3	P39077	534 aa	Known RBP	3.28	□□□□□ -1.88
YPR039W	YPR039W	BNA2	P47125	453 aa		3.28	□□□□□ -1.88
YPR039W	YPR039W	CTK1	Q03957	528 aa	Known RBP	3.28	□□□□□ -1.88
YPR039W	YPR039W	COQ11	Q05892	277 aa		3.28	□□□□□ -1.88
YPR039W	YPR039W	YNL162W-A	Q3E7A8	72 aa		3.28	□□□□□ -1.88
YPR039W	YPR039W	YLR149C	Q99296	730 aa		3.28	□□□□□ -1.88
YPR039W	YPR039W	HRP1	Q99383	534 aa	Known RBP	3.28	□□□□□ -1.88
YPR039W	YPR039W	PYC1	P11154	1178 aa	Known RBP	3.27	□□□□□ -1.89
YPR039W	YPR039W	SPO11	P23179	398 aa		3.27	□□□□□ -1.89
YPR039W	YPR039W	HOG1	P32485	435 aa		3.27	□□□□□ -1.89
YPR039W	YPR039W	PPG1	P32838	368 aa		3.27	□□□□□ -1.89
YPR039W	YPR039W	PHO11	P35842	467 aa		3.27	□□□□□ -1.89
YPR039W	YPR039W	RRP14	P36080	434 aa	Known RBP	3.27	□□□□□ -1.89
YPR039W	YPR039W	HSL7	P38274	827 aa		3.27	□□□□□ -1.89
YPR039W	YPR039W	PHO12	P38693	467 aa		3.27	□□□□□ -1.89
YPR039W	YPR039W	NUP60	P39705	539 aa		3.27	□□□□□ -1.89
YPR039W	YPR039W	CTR1	P49573	406 aa		3.27	□□□□□ -1.89
YPR039W	YPR039W	YAP1802	P53309	568 aa		3.27	□□□□□ -1.89
YPR039W	YPR039W	RNH70	P53331	553 aa		3.27	□□□□□ -1.89
YPR039W	YPR039W	ORC4	P54791	529 aa		3.27	□□□□□ -1.89
YPR039W	YPR039W	NHX1	Q04121	633 aa		3.27	□□□□□ -1.89

Retrieved 100 of 5,963 RNA–protein pairs in 49.8 ms