RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP1	YOR098C	TOP2	P06786	1428 aa	Known RBP	5.96	□□□□□ -1.45
NUP1	YOR098C	ULS1	Q08562	1619 aa		5.96	□□□□□ -1.46
NUP1	YOR098C	ILS1	P09436	1072 aa	Known RBP	5.96	□□□□□ -1.46
NUP1	YOR098C	PDC6	P26263	563 aa	Known RBP	5.96	□□□□□ -1.46
NUP1	YOR098C	RTG1	P32607	177 aa		5.96	□□□□□ -1.46
NUP1	YOR098C	SLA1	P32790	1244 aa		5.96	□□□□□ -1.46
NUP1	YOR098C	YIL166C	P40445	542 aa		5.96	□□□□□ -1.46
NUP1	YOR098C	DAM1	P53267	343 aa		5.96	□□□□□ -1.46
NUP1	YOR098C	PTA1	Q01329	785 aa	Predicted RBP	5.96	□□□□□ -1.46
NUP1	YOR098C	SEM1	O94742	89 aa		5.96	□□□□□ -1.46
NUP1	YOR098C	DBP2	P24783	546 aa	Known RBP	5.96	□□□□□ -1.46
NUP1	YOR098C	APM3	P38153	483 aa		5.96	□□□□□ -1.46
NUP1	YOR098C	RGD1	P38339	666 aa		5.96	□□□□□ -1.46
NUP1	YOR098C	TIF11	P38912	153 aa	Known RBP	5.96	□□□□□ -1.46
NUP1	YOR098C	PNT1	P38969	423 aa		5.96	□□□□□ -1.46
NUP1	YOR098C	RRT6	P53117	311 aa	Predicted RBP	5.96	□□□□□ -1.46
NUP1	YOR098C	YDR341C	Q05506	607 aa	Known RBP	5.96	□□□□□ -1.46
NUP1	YOR098C	VID22	Q05934	901 aa		5.96	□□□□□ -1.46
NUP1	YOR098C	CDC45	Q08032	650 aa		5.96	□□□□□ -1.46
NUP1	YOR098C	DBP10	Q12389	995 aa	Known RBP	5.96	□□□□□ -1.46
NUP1	YOR098C	NCP1	P16603	691 aa	Known RBP	5.95	□□□□□ -1.46
NUP1	YOR098C	CDC12	P32468	407 aa	Known RBP	5.95	□□□□□ -1.46
NUP1	YOR098C	NPL6	P32832	435 aa		5.95	□□□□□ -1.46
NUP1	YOR098C	SEC61	P32915	480 aa		5.95	□□□□□ -1.46
NUP1	YOR098C	XRS2	P33301	854 aa		5.95	□□□□□ -1.46
NUP1	YOR098C	HSL7	P38274	827 aa		5.95	□□□□□ -1.46
NUP1	YOR098C	YHR218W	P38899	603 aa		5.95	□□□□□ -1.46
NUP1	YOR098C	YIL092W	P40497	633 aa		5.95	□□□□□ -1.46
NUP1	YOR098C	RNR4	P49723	345 aa	Known RBP	5.95	□□□□□ -1.46
NUP1	YOR098C	VPS15	P22219	1454 aa		5.95	□□□□□ -1.46
NUP1	YOR098C	HTS1	P07263	546 aa	Known RBP	5.95	□□□□□ -1.46
NUP1	YOR098C	CDC16	P09798	840 aa		5.95	□□□□□ -1.46
NUP1	YOR098C	RRF1	P38771	230 aa		5.95	□□□□□ -1.46
NUP1	YOR098C	IMA5	P40884	581 aa		5.95	□□□□□ -1.46
NUP1	YOR098C	MSN5	P52918	1224 aa		5.95	□□□□□ -1.46
NUP1	YOR098C	RVB2	Q12464	471 aa	Known RBP	5.95	□□□□□ -1.46
NUP1	YOR098C	RPO31	P04051	1460 aa		5.95	□□□□□ -1.46
NUP1	YOR098C	MTF2	P10849	440 aa		5.95	□□□□□ -1.46
NUP1	YOR098C	LSM5	P40089	93 aa	Known RBP	5.95	□□□□□ -1.46
NUP1	YOR098C	MAD3	P47074	515 aa		5.95	□□□□□ -1.46
NUP1	YOR098C	ENV11	P53246	860 aa		5.95	□□□□□ -1.46
NUP1	YOR098C	KCS1	Q12494	1050 aa		5.95	□□□□□ -1.46
NUP1	YOR098C	YCL049C	P25577	312 aa		5.94	□□□□□ -1.46
NUP1	YOR098C	CDC48	P25694	835 aa	Known RBP	5.94	□□□□□ -1.46
NUP1	YOR098C	PGM2	P37012	569 aa	Known RBP	5.94	□□□□□ -1.46
NUP1	YOR098C	PTC2	P39966	464 aa	Known RBP	5.94	□□□□□ -1.46
NUP1	YOR098C	SSL2	Q00578	843 aa		5.94	□□□□□ -1.46
NUP1	YOR098C	YPL071C	Q02864	156 aa		5.94	□□□□□ -1.46
NUP1	YOR098C	MFB1	Q04922	465 aa		5.94	□□□□□ -1.46
NUP1	YOR098C	TFC6	Q06339	672 aa		5.94	□□□□□ -1.46
NUP1	YOR098C	TRM8	Q12009	286 aa		5.94	□□□□□ -1.46
NUP1	YOR098C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.94	□□□□□ -1.46	RIP-Chip
NUP1	YOR098C	RED1	P14291	827 aa		5.94	□□□□□ -1.46
NUP1	YOR098C	PHO3	P24031	467 aa		5.94	□□□□□ -1.46
NUP1	YOR098C	TFA2	P36145	328 aa		5.94	□□□□□ -1.46
NUP1	YOR098C	EAF5	P39995	279 aa		5.94	□□□□□ -1.46
NUP1	YOR098C	VNX1	P42839	908 aa		5.94	□□□□□ -1.46
NUP1	YOR098C	YDR514C	Q04408	483 aa		5.94	□□□□□ -1.46
NUP1	YOR098C	DCS2	Q12123	353 aa		5.94	□□□□□ -1.46
NUP1	YOR098C	PDX1	P16451	410 aa		5.93	□□□□□ -1.46
NUP1	YOR098C	TCB2	P48231	1178 aa		5.93	□□□□□ -1.46
NUP1	YOR098C	ARE2	P53629	642 aa	Known RBP	5.93	□□□□□ -1.46
NUP1	YOR098C	MRPL13	Q02204	264 aa		5.93	□□□□□ -1.46
NUP1	YOR098C	YBL029C-A	Q3E756	94 aa		5.93	□□□□□ -1.46
NUP1	YOR098C	DNF1	P32660	1571 aa		5.93	□□□□□ -1.46
NUP1	YOR098C	PDR5	P33302	1511 aa	Known RBP	5.93	□□□□□ -1.46
NUP1	YOR098C	TY1B-DR3	Q99231	1755 aa		5.93	□□□□□ -1.46
NUP1	YOR098C	GLK1	P17709	500 aa	Known RBP	5.93	□□□□□ -1.46
NUP1	YOR098C	NGG1	P32494	702 aa		5.93	□□□□□ -1.46
NUP1	YOR098C	TIM50	Q02776	476 aa		5.93	□□□□□ -1.46
NUP1	YOR098C	HEL2	Q05580	639 aa	Known RBP	5.93	□□□□□ -1.46
NUP1	YOR098C	ESC8	Q08119	714 aa		5.93	□□□□□ -1.46
NUP1	YOR098C	ADP1	P25371	1049 aa		5.93	□□□□□ -1.46
NUP1	YOR098C	YBR225W	P38321	900 aa		5.93	□□□□□ -1.46
NUP1	YOR098C	YHR202W	P38887	602 aa		5.93	□□□□□ -1.46
NUP1	YOR098C	PTK2	P47116	818 aa	Known RBP	5.93	□□□□□ -1.46
NUP1	YOR098C	CBK1	P53894	756 aa		5.93	□□□□□ -1.46
NUP1	YOR098C	YMR155W	Q03795	547 aa		5.93	□□□□□ -1.46
NUP1	YOR098C	RKM2	Q03942	479 aa		5.93	□□□□□ -1.46
NUP1	YOR098C	ADY3	Q07732	790 aa		5.93	□□□□□ -1.46
NUP1	YOR098C	SMF3	Q12078	473 aa	Predicted RBP	5.93	□□□□□ -1.46
NUP1	YOR098C	SEC65	P29478	273 aa		5.92	□□□□□ -1.46
NUP1	YOR098C	DBF4	P32325	704 aa		5.92	□□□□□ -1.46
NUP1	YOR098C	SAW1	P39735	261 aa		5.92	□□□□□ -1.46
NUP1	YOR098C	YJR124C	P47159	448 aa		5.92	□□□□□ -1.46
NUP1	YOR098C	HXT16	P47185	567 aa		5.92	□□□□□ -1.46
NUP1	YOR098C	VHS3	Q08438	674 aa		5.92	□□□□□ -1.46
NUP1	YOR098C	PTC5	Q12511	572 aa		5.92	□□□□□ -1.46
NUP1	YOR098C	NUP159	P40477	1460 aa		5.92	□□□□□ -1.46
NUP1	YOR098C	SES1	P07284	462 aa	Known RBP	5.92	□□□□□ -1.46
NUP1	YOR098C	RPL11A	P0C0W9	174 aa	Known RBP	5.92	□□□□□ -1.46
NUP1	YOR098C	IFA38	P38286	347 aa		5.92	□□□□□ -1.46
NUP1	YOR098C	PPE1	P38796	400 aa		5.92	□□□□□ -1.46
NUP1	YOR098C	YER010C	P40011	234 aa		5.92	□□□□□ -1.46
NUP1	YOR098C	PUG1	P40100	303 aa		5.92	□□□□□ -1.46
NUP1	YOR098C	HOS3	Q02959	697 aa	Known RBP	5.92	□□□□□ -1.46
NUP1	YOR098C	YCG1	Q06680	1035 aa		5.92	□□□□□ -1.46
NUP1	YOR098C	CWC2	Q12046	339 aa	Predicted RBP	5.92	□□□□□ -1.46
NUP1	YOR098C	CEX1	Q12453	761 aa		5.92	□□□□□ -1.46
NUP1	YOR098C	RPL11B	Q3E757	174 aa	Predicted RBP	5.92	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms